mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 1,903 | G→A | E523K (GAA→AAA) | thrA → | fused aspartate kinase/homoserine dehydrogenase 1 |
| RA | 34,233 | A→G | intergenic (+195/‑67) | carB → / → caiF | carbamoyl‑phosphate synthetase large subunit/DNA‑binding transcriptional activator CaiF |
| RA | 42,108 | G→A | intergenic (‑177/‑295) | caiT ← / → fixA | L‑carnitine:gamma‑butyrobetaine antiporter/putative electron transfer flavoprotein FixA |
| RA | 76,249 | G→A | Q351* (CAA→TAA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| MC JC | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| MC JC | 366,181 | Δ93 bp | coding (33‑125/3075 nt) | lacZ ← | beta‑galactosidase |
| RA | 367,573 | G→A | intergenic (‑63/+14) | lacI ← / ← mhpR | DNA‑binding transcriptional repressor LacI/DNA‑binding transcriptional activator MhpR |
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| RA | 662,269 | C→T | D4N (GAT→AAT) | lipB ← | lipoyl(octanoyl) transferase |
| RA | 696,470 | C→T | noncoding (35/75 nt) | glnX ← | tRNA‑Gln |
| RA | 968,837 | G→A | D158N (GAT→AAT) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | 1,040,126 | G→T | L277L (CTG→CTT) | appB → | cytochrome bd‑II subunit 2 |
| RA | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| RA | 1,069,743 | C→T | A33T (GCA→ACA) | rutG ← | pyrimidine:H(+) symporter |
| RA | 1,098,620 | T→A | V245V (GTT→GTA) | ghrA → | glyoxylate/hydroxypyruvate reductase A |
| RA | 1,111,727 | 2 bp→TT | coding (865‑866/2544 nt) | opgH → | osmoregulated periplasmic glucans biosynthesis protein H |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,277 | C→T | N385N (AAC→AAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,280 | G→C | A386A (GCG→GCC) | icd → | isocitrate dehydrogenase |
| RA | 1,196,283 | A→G | K387K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,292 | C→T | T390T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,304 | G→A | E394E (GAG→GAA) | icd → | isocitrate dehydrogenase |
| MC JC | 1,299,499 | Δ1,199 bp | insH21 | insH21 | |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,302,454 | Δ1 bp | coding (1273/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,343,293 | +GA | coding (36/219 nt) | osmB ← | osmotically‑inducible lipoprotein OsmB |
| RA | 1,357,202 | C→T | intergenic (‑92/+221) | sapA ← / ← ymjA | putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| MC JC | 1,367,750 | Δ176 bp | [pspF] | [pspF] | |
| RA | 1,428,052 | T→C | G225G (GGA→GGG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,097 | A→C | L210L (CTT→CTG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,370 | A→G | R119R (CGT→CGC) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,391 | G→C | L112L (CTC→CTG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,424 | A→G | D101D (GAT→GAC) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,432 | G→A | L99L (CTG→TTG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,451 | T→C | R92R (CGA→CGG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,463 | G→A | R88R (CGC→CGT) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,428,487 | G→A | A80A (GCC→GCT) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,600,234 | C→T | intergenic (‑25/+54) | lsrK ← / ← lsrR | autoinducer‑2 kinase/DNA‑binding transcriptional repressor LsrR |
| RA | 1,601,098 | C→A | S48S (TCG→TCT) | lsrR ← | DNA‑binding transcriptional repressor LsrR |
| RA | 1,601,103 | C→T | V47M (GTG→ATG) | lsrR ← | DNA‑binding transcriptional repressor LsrR |
| RA | 1,641,002 | T→C | intergenic (+27/+337) | ynfU → / ← cspB | putative zinc‑binding protein YnfU/cold shock‑like protein CspB |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,649,971 | C→T | P60S (CCG→TCG) | ydfD → | lysis protein |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,688,938 | C→T | A121A (GCC→GCT) | manA → | mannose‑6‑phosphate isomerase |
| RA | 1,702,757 | C→T | F175F (TTC→TTT) | add → | adenosine deaminase |
| RA | 1,729,510 | A→G | K142E (AAA→GAA) | lhr → | ATP‑dependent helicase Lhr |
| JC JC | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| RA | 1,764,640 | G→A | intergenic (‑254/+73) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,793,377 | Δ1 bp | coding (182/750 nt) | btuD ← | vitamin B12 ABC transporter ATP binding subunit |
| RA | 1,861,827 | C→T | A50T (GCC→ACC) | yeaC ← | DUF1315 domain‑containing protein YeaC |
| RA | 1,874,202 | G→A | intergenic (‑20/‑150) | yoaI ← / → yeaL | protein YoaI/DUF441 domain‑containing inner membrane protein YeaL |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,911,929 | 2 bp→TT | coding (647‑648/882 nt) | htpX ← | protease HtpX |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,142,163 | G→A | S18L (TCG→TTG) | dcd ← | dCTP deaminase |
| RA | 2,146,017 | C→T | L918F (CTT→TTT) | dgcE → | putative diguanylate cyclase DgcE |
| RA | 2,155,880 | C→T | L206L (CTC→CTT) | mdtB → | multidrug efflux pump RND permease subunit MdtB |
| RA | 2,173,448 | C→T | intergenic (‑575/+834) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,177,670 | G→A | L299F (CTC→TTC) | fbaB ← | fructose‑bisphosphate aldolase class I |
| RA | 2,219,948 | C→T | R681H (CGC→CAC) | bglX ← | beta‑D‑glucoside glucohydrolase, periplasmic |
| RA | 2,224,169 | A→G | F234F (TTT→TTC) | pbpG ← | peptidoglycan DD‑endopeptidase PbpG |
| RA | 2,237,105 | G→T | P217T (CCG→ACG) | mglC ← | D‑galactose/methyl‑galactoside ABC transporter membrane subunit |
| JC JC | 2,237,871 | IS1 (–) +9 bp | coding (1411‑1419/1521 nt) | mglA ← | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit |
| RA | 2,264,460 | 2 bp→AT | coding (598‑599/1182 nt) | setB → | sugar exporter SetB |
| RA | 2,319,078 | C→A | D267Y (GAT→TAT) | rcsC ← | histidine kinase RcsC |
| RA | 2,338,564 | A→G | V286A (GTG→GCG) | gyrA ← | DNA gyrase subunit A |
| RA | 2,360,550 | Δ1 bp | coding (865/1206 nt) | rhmD ← | L‑rhamnonate dehydratase |
| RA | 2,392,233 | C→G | G270A (GGT→GCT) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| RA | 2,423,891 | C→T | V207I (GTA→ATA) | hisP ← | lysine/arginine/ornithine ABC transporter/histidine ABC transporter, ATP binding subunit |
| RA | 2,443,447 | G→A | A562T (GCG→ACG) | mnmC → | fused tRNA 5‑aminomethyl‑2‑thiouridylate methyltransferase and tRNA 5‑aminomethyl‑2‑thiouridylate synthase |
| RA | 2,471,806 | G→A | intergenic (‑289/+306) | yfdK ← / ← yfdM | putative tail fiber assembly protein YfdK/putative methyltransferase YfdM |
| RA | 2,473,392 | G→A | intergenic (‑146/‑212) | yfdO ← / → yfdP | protein YdfO/uncharacterized protein YfdP |
| RA | 2,473,397 | +T | intergenic (‑151/‑207) | yfdO ← / → yfdP | protein YdfO/uncharacterized protein YfdP |
| RA | 2,485,434 | C→T | A354V (GCT→GTT) | evgS → | sensor histidine kinase EvgS |
| RA | 2,510,609 | C→T | P327L (CCG→CTG) | yfeO → | putative transport protein YfeO |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,577,911 | Δ1 bp | coding (467/2280 nt) | maeB ← | malate dehydrogenase (oxaloacetate‑decarboxylating) (NADP(+)) |
| RA | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| RA | 2,630,852 | G→A | S176N (AGC→AAC) | yfgI → | nalidixic acid resistance protein YfgI |
| RA | 2,710,736 | C→T | T106I (ACC→ATC) | nadB → | L‑aspartate oxidase |
| RA | 2,731,957 | C→T | E739E (GAG→GAA) E739E (GAG→GAA) |
clpB ← clpB ← |
chaperone protein ClpB chaperone protein ClpB |
| RA | 2,732,992 | G→A | I394I (ATC→ATT) I394I (ATC→ATT) |
clpB ← clpB ← |
chaperone protein ClpB chaperone protein ClpB |
| RA | 2,764,599 | G→A | A185A (GCC→GCT) | abpA ← | anti‑bacteriophage protein |
| RA | 2,788,391 | C→T | intergenic (‑2554/‑594) | ileY ← / → glaH | tRNA‑Ile/glutarate dioxygenase GlaH |
| RA | 2,800,969 | G→A | S2N (AGC→AAC) | nrdI → | dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI |
| RA | 2,804,133 | C→T | S211F (TCT→TTT) | nrdF → | ribonucleoside‑diphosphate reductase 2 subunit beta |
| RA | 2,814,459 | Δ1 bp | coding (275/516 nt) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,814,461 | C→T | L91L (CTG→CTA) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,867,455 | G→A | Q33* (CAG→TAG) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,880,635 | T→C | L138L (TTA→TTG) | casD ← | type I‑E CRISPR system Cascade subunit CasD |
| RA | 2,881,212 | C→T | A311T (GCG→ACG) | casC ← | type I‑E CRISPR system Cascade subunit CasC |
| RA | 2,883,115 | G→A | P342S (CCT→TCT) | casA ← | type I‑E CRISPR system Cascade subunit CasA |
| RA | 2,886,731 | T→C | I163M (ATA→ATG) | cas3 ← | CRISPR‑associated endonuclease/helicase Cas3 |
| RA | 2,890,626 | G→A | L425F (CTC→TTC) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,893,219 | C→T | S188F (TCC→TTC) | ygcN → | putative oxidoreductase with FAD/NAD(P)‑binding domain |
| RA | 2,893,647 | C→T | Q331* (CAG→TAG) | ygcN → | putative oxidoreductase with FAD/NAD(P)‑binding domain |
| RA | 2,894,839 | C→T | intergenic (+68/+80) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,916,216 | G→A | G387E (GGG→GAG) | barA → | sensor histidine kinase BarA |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 3,050,472 | G→A | L66L (CTG→TTG) | gcvT ← | aminomethyltransferase |
| RA | 3,061,168 | G→A | D107N (GAC→AAC) | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,061,916 | C→T | A356V (GCC→GTC) | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,065,449 | G→A | L216L (TTG→TTA) | scpC → | propionyl‑CoA:succinate CoA transferase |
| RA | 3,065,861 | G→A | V354I (GTC→ATC) | scpC → | propionyl‑CoA:succinate CoA transferase |
| RA | 3,089,260 | T→C | V326A (GTG→GCG) | galP → | galactose:H(+) symporter |
| RA | 3,090,968 | G→A | E208K (GAG→AAG) | endA → | DNA‑specific endonuclease I |
| RA | 3,104,887 | G→A | S152N (AGC→AAC) | mltC → | membrane‑bound lytic murein transglycosylase C |
| RA | 3,120,786 | G→A | T165I (ACT→ATT) | glcA ← | glycolate/lactate:H(+) symporter GlcA |
| RA | 3,121,033 | T→C | I83V (ATT→GTT) | glcA ← | glycolate/lactate:H(+) symporter GlcA |
| RA | 3,127,981 | G→A | P14L (CCC→CTC) | glcD ← | glycolate dehydrogenase, putative FAD‑linked subunit |
| RA | 3,130,161 | G→A | L19F (CTT→TTT) | yghO ← | putative DNA‑binding transcriptional regulator YghO |
| RA | 3,132,077 | G→A | A111V (GCG→GTG) | yghQ ← | putative transport protein YghQ |
| RA | 3,133,175 | G→A | T13I (ACC→ATC) | yghR ← | putative ATP‑binding protein YghR |
| RA | 3,134,263 | G→A | A45T (GCC→ACC) | yghT → | putative ATP‑binding protein YghT |
| RA | 3,145,944 | G→A | L106L (CTC→CTT) | hybO ← | hydrogenase 2 small subunit |
| RA | 3,150,316 | G→A | E219K (GAG→AAG) | yghA → | NADP(+)‑dependent aldehyde reductase |
| RA | 3,162,216 | G→A | Q152* (CAG→TAG) | ftsP ← | cell division protein FtsP |
| RA | 3,176,625 | G→A | S70F (TCC→TTC) | cpdA ← | cAMP phosphodiesterase |
| RA | 3,179,383 | G→A | K423K (AAG→AAA) | tolC → | outer membrane channel TolC |
| RA | 3,193,351 | G→A | G163E (GGG→GAG) | yqiK → | flotillin family inner membrane protein YqiK |
| RA | 3,204,617 | G→A | intergenic (‑28/‑77) | folB ← / → plsY | dihydroneopterin aldolase/putative glycerol‑3‑phosphate acyltransferase |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,219,128 | G→A | intergenic (‑52/‑366) | aer ← / → patA | aerotaxis receptor/putrescine aminotransferase |
| RA | 3,224,895 | C→T | L755L (CTG→TTG) | ebgA → | evolved beta‑D‑galactosidase subunit alpha |
| RA | 3,227,339 | C→T | T369I (ACC→ATC) | ygjI → | putative transporter YgjI |
| RA | 3,240,423 | C→T | G160G (GGC→GGT) | sstT → | serine/threonine:Na(+) symporter |
| RA | 3,240,842 | T→C | M300T (ATG→ACG) | sstT → | serine/threonine:Na(+) symporter |
| RA | 3,256,157 | C→T | Q165Q (CAG→CAA) | cyuA ← | putative L‑cysteine desulfidase CyuA |
| RA | 3,270,497 | C→T | noncoding (96/377 nt) | rnpB ← | RNase P catalytic RNA component |
| RA | 3,275,902 | A→T | E207D (GAA→GAT) | garD → | GarD |
| RA | 3,292,312 | C→T | P324P (CCC→CCT) | yraK → | putative fimbrial adhesin YraK |
| RA | 3,336,411 | 2 bp→AT | coding (83‑84/1260 nt) | murA ← | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,436,697 | G→A | E60E (GAG→GAA) | trkA → | NAD‑binding component of Trk potassium transporters |
| RA | 3,452,547 | A→G | F127S (TTC→TCC) | rplC ← | 50S ribosomal subunit protein L3 |
| RA | 3,474,424 | T→G | K43N (AAA→AAC) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,622,770 | G→A | G1193G (GGG→GGA) | rhsB → | rhs element protein RhsB |
| RA | 3,635,116 | G→A | W92* (TGG→TGA) | yhiM → | inner membrane protein YhiM |
| RA | 3,698,243 | G→A | M10I (ATG→ATA) | bcsG → | cellulose phosphoethanolamine transferase |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,785,125 | G→A | intergenic (‑110/‑135) | yibN ← / → gpmM | putative sulfurtransferase YibN/2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,142 | T→C | intergenic (‑127/‑118) | yibN ← / → gpmM | putative sulfurtransferase YibN/2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,264 | T→C | L2S (TTG→TCG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,316 | C→T | R19R (CGC→CGT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,397 | A→G | L46L (CTA→CTG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,550 | G→A | P97P (CCG→CCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,589 | C→T | G110G (GGC→GGT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,595 | G→A | A112A (GCG→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,730 | T→C | T157T (ACT→ACC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,766 | C→T | F169F (TTC→TTT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,772 | A→G | E171E (GAA→GAG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,781 | C→T | A174A (GCC→GCT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,786 | T→A | L176Q (CTG→CAG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,790 | C→T | G177G (GGC→GGT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,859 | A→T | V200V (GTA→GTT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,868 | T→C | A203A (GCT→GCC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,895 | C→T | G212G (GGC→GGT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,913 | C→T | T218T (ACC→ACT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,934 | T→A | A225A (GCT→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,955 | T→C | N232N (AAT→AAC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,958 | T→C | D233D (GAT→GAC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,961 | A→G | E234E (GAA→GAG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,982 | C→T | I241I (ATC→ATT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,785,988 | T→A | A243A (GCT→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,003 | C→T | D248D (GAC→GAT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,027 | A→G | A256A (GCA→GCG) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,063 | T→C | R268R (CGT→CGC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,078 | T→A | A273A (GCT→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,084 | G→A | V275V (GTG→GTA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,090 | T→A | A277A (GCT→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,099 | T→C | D280D (GAT→GAC) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,444 | C→T | I395I (ATC→ATT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,465 | C→T | G402G (GGC→GGT) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,519 | G→A | A420A (GCG→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,606 | G→A | E449E (GAG→GAA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,704 | A→C | E482A (GAA→GCA) | gpmM → | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,786,936 | C→T | H33H (CAC→CAT) | envC → | murein hydrolase activator EnvC |
| RA | 3,786,972 | T→C | A45A (GCT→GCC) | envC → | murein hydrolase activator EnvC |
| RA | 3,786,975 | C→T | D46D (GAC→GAT) | envC → | murein hydrolase activator EnvC |
| RA | 3,786,984 | A→G | A49A (GCA→GCG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,224 | G→A | E129E (GAG→GAA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,389 | G→A | Q184Q (CAG→CAA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,416 | G→A | E193E (GAG→GAA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,449 | G→T | A204A (GCG→GCT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,455 | C→T | N206N (AAC→AAT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,476 | A→G | A213A (GCA→GCG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,485 | G→A | E216E (GAG→GAA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,509 | A→G | Q224Q (CAA→CAG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,513 | T→C | L226L (TTG→CTA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,515 | G→A | L226L (TTG→CTA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,518 | C→T | S227S (AGC→AGT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,521 | G→A | E228E (GAG→GAA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,527 | C→T | R230R (CGC→CGT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,698 | T→A | R287R (CGT→CGA) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,701 | C→T | T288T (ACC→ACT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,707 | T→C | G290G (GGT→GGC) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,713 | C→T | G292G (GGC→GGT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,773 | A→G | E312E (GAA→GAG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,803 | T→G | G322G (GGT→GGG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,809 | T→G | V324V (GTT→GTG) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,812 | C→T | I325I (ATC→ATT) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,818 | T→C | A327A (GCT→GCC) | envC → | murein hydrolase activator EnvC |
| RA | 3,787,992 | G→A | P385P (CCG→CCA) | envC → | murein hydrolase activator EnvC |
| RA | 3,788,241 | T→C | P47P (CCT→CCC) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,349 | 2 bp→AC | coding (249‑250/960 nt) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,382 | A→G | L94L (CTA→CTG) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,475 | C→T | G125G (GGC→GGT) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,523 | G→A | A141A (GCG→GCA) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,598 | C→T | G166G (GGC→GGT) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,628 | A→G | V176V (GTA→GTG) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,646 | A→G | Q182Q (CAA→CAG) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,649 | T→C | N183N (AAT→AAC) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,688 | C→T | D196D (GAC→GAT) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,709 | G→A | S203S (TCG→TCA) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,737 | G→T | A213S (GCA→TCA) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,752 | T→C | L218L (TTG→CTA) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,788,754 | G→A | L218L (TTG→CTA) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,789,039 | 2 bp→AC | coding (939‑940/960 nt) | yibQ → | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| RA | 3,789,146 | G→C | V312V (GTC→GTG) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,272 | C→T | E270E (GAG→GAA) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,309 | A→G | M258T (ATG→ACG) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,479 | G→A | N201N (AAC→AAT) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,563 | A→G | R173R (CGT→CGC) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,647 | G→A | G145G (GGC→GGT) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,669 | G→C | T138S (ACC→AGC) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,755 | C→T | M109I (ATG→ATA) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,789,919 | A→G | Y55H (TAT→CAT) | waaH ← | UDP‑glucuronate:LPS(HepIII) glycosyltransferase |
| RA | 3,790,401 | A→C | R315R (CGT→CGG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,407 | G→A | T313T (ACC→ACT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,422 | A→G | L308L (CTT→CTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,491 | A→G | G285G (GGT→GGC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,509 | T→C | K279K (AAA→AAG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,524 | G→T | T274T (ACC→ACA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,533 | G→T | I271I (ATC→ATA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,536 | A→C | S270S (TCT→TCG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,542 | A→G | D268D (GAT→GAC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,548 | C→A | P266P (CCG→CCT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,551 | C→T | P265P (CCG→CCA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,575 | G→A | G257G (GGC→GGT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,584 | A→G | N254N (AAT→AAC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,596 | A→G | L250L (CTT→CTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,650 | A→G | G232G (GGT→GGC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,665 | T→C | L227L (TTA→TTG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,667 | 2 bp→GT | coding (678‑679/1026 nt) | tdh ← | threonine dehydrogenase |
| RA | 3,790,671 | C→T | A225A (GCG→GCA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,680 | G→A | D222D (GAC→GAT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,686 | G→A | L220L (CTC→CTT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,689 | A→G | N219N (AAT→AAC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,698 | G→A | A216A (GCC→GCT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,707 | A→G | V213V (GTT→GTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,731 | A→G | R205R (CGT→CGC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,740 | C→T | E202E (GAG→GAA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,743 | A→G | L201L (CTT→CTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,746 | G→A | R200R (CGC→CGT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,749 | G→A | Y199Y (TAC→TAT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,755 | G→A | N197N (AAC→AAT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,809 | T→A | A179A (GCA→GCT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,821 | A→T | I175I (ATT→ATA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,827 | G→A | G173G (GGC→GGT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,839 | A→G | V169V (GTT→GTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,851 | T→C | E165E (GAA→GAG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,857 | C→A | V163V (GTG→GTT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,866 | A→G | F160F (TTT→TTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,911 | T→G | A145A (GCA→GCC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,913 | 2 bp→AA | coding (432‑433/1026 nt) | tdh ← | threonine dehydrogenase |
| RA | 3,790,917 | T→C | L143M (TTA→CTG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,919 | A→G | L143M (TTA→CTG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,923 | A→G | D141D (GAT→GAC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,929 | A→G | I139I (ATT→ATC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,938 | G→T | P136P (CCC→CCA) | tdh ← | threonine dehydrogenase |
| RA | 3,790,959 | T→C | A129A (GCA→GCG) | tdh ← | threonine dehydrogenase |
| RA | 3,790,983 | A→G | F121F (TTT→TTC) | tdh ← | threonine dehydrogenase |
| RA | 3,790,995 | G→A | R117R (CGC→CGT) | tdh ← | threonine dehydrogenase |
| RA | 3,790,998 | A→G | N116N (AAT→AAC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,004 | A→G | G114G (GGT→GGC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,007 | A→G | V113V (GTT→GTC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,013 | T→G | I111I (ATA→ATC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,030 | A→G | L106L (TTG→CTG) | tdh ← | threonine dehydrogenase |
| RA | 3,791,043 | A→G | G101G (GGT→GGC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,058 | G→A | C96C (TGC→TGT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,061 | A→G | H95H (CAT→CAC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,067 | A→G | C93C (TGT→TGC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,085 | G→T | G87G (GGC→GGA) | tdh ← | threonine dehydrogenase |
| RA | 3,791,091 | A→G | V85V (GTT→GTC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,103 | G→A | I81I (ATC→ATT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,109 | G→A | F79F (TTC→TTT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,130 | A→G | I72I (ATT→ATC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,133 | A→G | G71G (GGT→GGC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,139 | C→T | V69V (GTG→GTA) | tdh ← | threonine dehydrogenase |
| RA | 3,791,160 | G→A | G62G (GGC→GGT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,163 | C→G | V61V (GTG→GTC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,166 | G→A | V60V (GTC→GTT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,184 | G→A | T54T (ACC→ACT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,211 | A→G | Y45Y (TAT→TAC) | tdh ← | threonine dehydrogenase |
| RA | 3,791,259 | C→T | L29L (CTG→CTA) | tdh ← | threonine dehydrogenase |
| RA | 3,791,274 | C→A | G24G (GGG→GGT) | tdh ← | threonine dehydrogenase |
| RA | 3,791,277 | G→C | L23L (CTC→CTG) | tdh ← | threonine dehydrogenase |
| RA | 3,791,286 | 2 bp→CT | coding (59‑60/1026 nt) | tdh ← | threonine dehydrogenase |
| RA | 3,791,346 | C→T | intergenic (‑1/+9) | tdh ← / ← kbl | threonine dehydrogenase/2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,391 | A→G | F387F (TTT→TTC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,406 | A→G | R382R (CGT→CGC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,496 | A→G | V352V (GTT→GTC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,526 | G→A | A342A (GCC→GCT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,553 | A→G | G333G (GGT→GGC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,661 | T→C | E297E (GAA→GAG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,676 | G→A | V292V (GTC→GTT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,688 | T→C | V288V (GTA→GTG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,694 | G→A | I286I (ATC→ATT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,700 | C→A | A284A (GCG→GCT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,706 | A→G | V282V (GTT→GTC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,712 | G→A | A280A (GCC→GCT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,829 | C→T | T241T (ACG→ACA) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,832 | A→G | G240G (GGT→GGC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,889 | A→G | N221N (AAT→AAC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,943 | A→G | Y203Y (TAT→TAC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,976 | G→A | N192N (AAC→AAT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,791,997 | T→C | S185S (TCA→TCG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,018 | G→A | I178I (ATC→ATT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,023 | G→A | L177L (CTG→TTG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,114 | G→A | C146C (TGC→TGT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,180 | A→G | G124G (GGT→GGC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,186 | A→C | L122L (CTT→CTG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,258 | G→T | A98A (GCC→GCA) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,375 | A→C | P59P (CCT→CCG) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,402 | G→A | N50N (AAC→AAT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,501 | C→G | R17R (CGG→CGC) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,616 | A→G | intergenic (‑65/+210) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| MC JC | 3,792,656 | 1283 bp→61 bp | htrL | htrL | |
| RA | 3,794,037 | A→G | K17K (AAA→AAG) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,122 | A→G | N46D (AAT→GAT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,130 | A→G | A48A (GCA→GCG) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,217 | G→A | A77A (GCG→GCA) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,241 | C→T | D85D (GAC→GAT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,280 | G→A | K98K (AAG→AAA) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,298 | C→T | C104C (TGC→TGT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,307 | T→C | R107R (CGT→CGC) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,325 | C→T | Y113Y (TAC→TAT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,328 | T→A | A114A (GCT→GCA) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,337 | A→G | A117A (GCA→GCG) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,640 | T→A | A218A (GCT→GCA) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,646 | G→A | V220V (GTG→GTA) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,649 | T→C | N221N (AAT→AAC) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,721 | G→T | A245A (GCG→GCT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,794,829 | A→G | T281T (ACA→ACG) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,795,093 | T→C | I55I (ATT→ATC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,192 | C→A | P88P (CCC→CCA) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,334 | A→G | I136V (ATA→GTC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,336 | A→C | I136V (ATA→GTC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,366 | C→T | R146R (CGC→CGT) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,369 | A→C | T147T (ACA→ACC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,480 | T→C | G184G (GGT→GGC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,591 | G→T | S221S (TCG→TCT) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,744 | G→A | L272L (CTG→CTA) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,750 | T→C | H274H (CAT→CAC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,847 | T→C | L307L (TTG→CTG) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,795,909 | A→G | L327L (TTA→TTG) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,796,197 | G→T | A73A (GCG→GCT) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,254 | C→T | D92D (GAC→GAT) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,317 | 2 bp→AT | coding (339‑340/960 nt) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,344 | T→G | P122P (CCT→CCG) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,432 | T→C | L152L (TTG→CTG) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,473 | C→T | I165I (ATC→ATT) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,485 | T→C | F169F (TTT→TTC) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,755 | G→A | S259S (TCG→TCA) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,782 | G→A | T268T (ACG→ACA) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,796,821 | A→T | P281P (CCA→CCT) | waaC → | ADP‑heptose:LPS heptosyltransferase 1 |
| RA | 3,808,180 | (A)6→5 | noncoding (59/73 nt) | rirA ← | small regulatory RNA RirA |
| RA | 3,808,731 | A→G | A64A (GCA→GCG) | waaA → | KDO transferase |
| RA | 3,808,785 | A→T | V82V (GTA→GTT) | waaA → | KDO transferase |
| RA | 3,808,866 | T→C | D109D (GAT→GAC) | waaA → | KDO transferase |
| RA | 3,808,878 | A→G | A113A (GCA→GCG) | waaA → | KDO transferase |
| RA | 3,809,082 | T→C | A181A (GCT→GCC) | waaA → | KDO transferase |
| RA | 3,809,085 | G→C | A182A (GCG→GCC) | waaA → | KDO transferase |
| RA | 3,809,136 | T→C | N199N (AAT→AAC) | waaA → | KDO transferase |
| RA | 3,809,142 | G→A | V201V (GTG→GTA) | waaA → | KDO transferase |
| RA | 3,809,352 | G→A | P271P (CCG→CCA) | waaA → | KDO transferase |
| RA | 3,809,376 | C→T | N279N (AAC→AAT) | waaA → | KDO transferase |
| RA | 3,809,454 | T→G | V305V (GTT→GTG) | waaA → | KDO transferase |
| RA | 3,809,487 | T→C | Y316Y (TAT→TAC) | waaA → | KDO transferase |
| RA | 3,809,664 | 2 bp→GT | coding (1125‑1126/1278 nt) | waaA → | KDO transferase |
| RA | 3,809,905 | G→A | Q27Q (CAG→CAA) | coaD → | pantetheine‑phosphate adenylyltransferase |
| RA | 3,809,982 | 2 bp→AG | coding (158‑159/480 nt) | coaD → | pantetheine‑phosphate adenylyltransferase |
| RA | 3,810,043 | A→G | L73L (TTA→TTG) | coaD → | pantetheine‑phosphate adenylyltransferase |
| RA | 3,810,106 | A→G | A94A (GCA→GCG) | coaD → | pantetheine‑phosphate adenylyltransferase |
| RA | 3,810,430 | A→G | G241G (GGT→GGC) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,460 | A→C | A231A (GCT→GCG) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,772 | G→A | T127A (ACC→GCT) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,774 | T→C | T127A (ACC→GCT) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,781 | A→G | N124N (AAT→AAC) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,784 | A→G | H123H (CAT→CAC) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,853 | G→A | G100G (GGC→GGT) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,810,937 | T→C | L72L (TTA→TTG) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,811,075 | T→C | A26A (GCA→GCG) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,811,120 | G→A | R11R (CGC→CGT) | mutM ← | DNA‑formamidopyrimidine glycosylase |
| RA | 3,811,179 | G→A | intergenic (‑27/+71) | mutM ← / ← rpmG | DNA‑formamidopyrimidine glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,231 | T→C | intergenic (‑79/+19) | mutM ← / ← rpmG | DNA‑formamidopyrimidine glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,812,146 | C→G | R138S (AGG→AGC) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,170 | G→T | S130S (TCC→TCA) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,238 | T→G | R108R (AGG→CGG) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,296 | C→T | R88R (CGG→CGA) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,338 | C→T | V74V (GTG→GTA) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,356 | G→A | G68G (GGC→GGT) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,547 | A→C | S5A (TCA→GCA) | yicR ← | RadC‑like JAB domain‑containing protein YicR |
| RA | 3,812,601 | T→C | intergenic (‑42/‑130) | yicR ← / → dfp | RadC‑like JAB domain‑containing protein YicR/fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,812,637 | C→T | intergenic (‑78/‑94) | yicR ← / → dfp | RadC‑like JAB domain‑containing protein YicR/fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,812,729 | T→A | intergenic (‑170/‑2) | yicR ← / → dfp | RadC‑like JAB domain‑containing protein YicR/fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,812,920 | C→T | L64L (CTG→TTG) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,207 | T→A | G159G (GGT→GGA) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,216 | T→C | G162G (GGT→GGC) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,258 | G→A | A176A (GCG→GCA) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,264 | G→T | A178A (GCG→GCT) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,342 | G→C | P204P (CCG→CCC) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,813,594 | G→A | E288E (GAG→GAA) | dfp → | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase |
| RA | 3,814,040 | A→G | N38D (AAC→GAC) | dut → | dUTP diphosphatase |
| RA | 3,814,231 | G→T | V101V (GTG→GTT) | dut → | dUTP diphosphatase |
| RA | 3,814,661 | C→T | T56T (ACC→ACT) | slmA → | nucleoid occlusion factor SlmA |
| RA | 3,814,718 | C→T | N75N (AAC→AAT) | slmA → | nucleoid occlusion factor SlmA |
| RA | 3,814,904 | C→T | R137R (CGC→CGT) | slmA → | nucleoid occlusion factor SlmA |
| RA | 3,815,024 | A→G | E177E (GAA→GAG) | slmA → | nucleoid occlusion factor SlmA |
| RA | 3,815,292 | G→C | R159R (CGC→CGG) | pyrE ← | orotate phosphoribosyltransferase |
| RA | 3,815,307 | G→A | L154L (CTC→CTT) | pyrE ← | orotate phosphoribosyltransferase |
| RA | 3,815,319 | C→T | V150V (GTG→GTA) | pyrE ← | orotate phosphoribosyltransferase |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,815,893 | A→C | A219A (GCT→GCG) | rph ← | truncated RNase PH |
| RA | 3,815,903 | A→G | I216T (ATC→ACC) | rph ← | truncated RNase PH |
| RA | 3,816,007 | A→T | S181S (TCT→TCA) | rph ← | truncated RNase PH |
| RA | 3,816,036 | 2 bp→TT | coding (513‑514/687 nt) | rph ← | truncated RNase PH |
| RA | 3,816,043 | G→A | G169G (GGC→GGT) | rph ← | truncated RNase PH |
| RA | 3,816,049 | C→T | V167V (GTG→GTA) | rph ← | truncated RNase PH |
| RA | 3,816,055 | T→A | G165G (GGA→GGT) | rph ← | truncated RNase PH |
| RA | 3,816,067 | T→C | A161A (GCA→GCG) | rph ← | truncated RNase PH |
| RA | 3,816,088 | C→T | P154P (CCG→CCA) | rph ← | truncated RNase PH |
| RA | 3,816,137 | A→G | V138A (GTA→GCA) | rph ← | truncated RNase PH |
| RA | 3,816,148 | G→A | C134C (TGC→TGT) | rph ← | truncated RNase PH |
| RA | 3,816,166 | C→A | A128A (GCG→GCT) | rph ← | truncated RNase PH |
| RA | 3,816,259 | A→T | A97A (GCT→GCA) | rph ← | truncated RNase PH |
| RA | 3,816,316 | C→T | A78A (GCG→GCA) | rph ← | truncated RNase PH |
| RA | 3,816,349 | T→C | P67P (CCA→CCG) | rph ← | truncated RNase PH |
| RA | 3,816,358 | G→A | G64G (GGC→GGT) | rph ← | truncated RNase PH |
| RA | 3,816,406 | C→A | P48P (CCG→CCT) | rph ← | truncated RNase PH |
| RA | 3,816,439 | C→T | V37V (GTG→GTA) | rph ← | truncated RNase PH |
| RA | 3,817,090 | G→A | D139N (GAC→AAC) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,224 | G→A | E183E (GAG→GAA) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,227 | 2 bp→CT | coding (552‑553/864 nt) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,257 | G→T | V194V (GTG→GTT) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,260 | 2 bp→GT | coding (585‑586/864 nt) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,287 | 2 bp→GT | coding (612‑613/864 nt) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,332 | T→C | D219D (GAT→GAC) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,350 | C→T | V225V (GTC→GTT) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,359 | C→G | T228T (ACC→ACG) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,386 | G→C | A237A (GCG→GCC) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,404 | T→C | D243D (GAT→GAC) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,482 | C→G | A269A (GCC→GCG) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,485 | C→T | I270I (ATC→ATT) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,530 | C→T | N285N (AAC→AAT) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,533 | C→T | I286I (ATC→ATT) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,536 | A→G | E287E (GAA→GAG) | yicC → | putative RNase adaptor protein YicC |
| RA | 3,817,548 | G→A | intergenic (+9/‑212) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,550 | C→T | intergenic (+11/‑210) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,565 | C→A | intergenic (+26/‑195) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,583 | +C | intergenic (+44/‑177) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,618 | Δ1 bp | intergenic (+79/‑142) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,739 | T→C | intergenic (+200/‑21) | yicC → / → dinD | putative RNase adaptor protein YicC/DNA damage‑inducible protein D |
| RA | 3,817,789 | G→A | E10E (GAG→GAA) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,062 | C→T | V101V (GTC→GTT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,077 | G→A | Q106Q (CAG→CAA) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,113 | T→G | L118L (CTT→CTG) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,128 | A→T | A123A (GCA→GCT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,131 | T→C | F124F (TTT→TTC) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,133 | A→G | K125R (AAG→AGG) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,161 | G→T | L134L (CTG→CTT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,176 | G→A | E139E (GAG→GAA) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,212 | A→G | A151A (GCA→GCG) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,226 | T→G | V156G (GTA→GGA) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,238 | 2 bp→TC | coding (479‑480/825 nt) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,271 | A→G | Q171R (CAG→CGG) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,302 | T→C | A181A (GCT→GCC) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,305 | T→C | I182I (ATT→ATC) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,331 | A→G | N191S (AAT→AGT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,374 | T→G | A205A (GCT→GCG) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,443 | A→T | A228A (GCA→GCT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,446 | C→T | N229N (AAC→AAT) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,468 | C→A | R237S (CGC→AGC) | dinD → | DNA damage‑inducible protein D |
| RA | 3,818,617 | C→T | intergenic (+33/‑257) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,636 | G→A | intergenic (+52/‑238) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,647 | A→G | intergenic (+63/‑227) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,666 | T→C | intergenic (+82/‑208) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,684 | +AC | intergenic (+100/‑190) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,691 | G→A | intergenic (+107/‑183) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,749 | 2 bp→AC | intergenic (+165/‑124) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,797 | C→T | intergenic (+213/‑77) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,801 | C→A | intergenic (+217/‑73) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,828 | G→A | intergenic (+244/‑46) | dinD → / → yicG | DNA damage‑inducible protein D/PF03458 family inner membrane protein YicG |
| RA | 3,818,930 | G→T | A19A (GCG→GCT) | yicG → | PF03458 family inner membrane protein YicG |
| RA | 3,818,942 | A→G | G23G (GGA→GGG) | yicG → | PF03458 family inner membrane protein YicG |
| RA | 3,818,948 | G→C | R25R (CGG→CGC) | yicG → | PF03458 family inner membrane protein YicG |
| RA | 3,819,158 | C→T | L95L (CTC→CTT) | yicG → | PF03458 family inner membrane protein YicG |
| RA | 3,819,185 | G→C | G104G (GGG→GGC) | yicG → | PF03458 family inner membrane protein YicG |
| RA | 3,819,584 | T→C | G529G (GGA→GGG) | ligB ← | DNA ligase B |
| RA | 3,819,833 | T→C | E446E (GAA→GAG) | ligB ← | DNA ligase B |
| RA | 3,819,866 | A→G | G435G (GGT→GGC) | ligB ← | DNA ligase B |
| RA | 3,820,036 | C→T | D379N (GAT→AAT) | ligB ← | DNA ligase B |
| RA | 3,820,223 | T→C | A316A (GCA→GCG) | ligB ← | DNA ligase B |
| RA | 3,821,143 | C→T | G10S (GGT→AGT) | ligB ← | DNA ligase B |
| RA | 3,821,188 | A→G | intergenic (‑18/‑240) | ligB ← / → gmk | DNA ligase B/guanylate kinase |
| RA | 3,877,783 | C→T | T779T (ACG→ACA) | gyrB ← | DNA gyrase subunit B |
| RA | 3,890,364 | C→T | A43A (GCC→GCT) | tnaB → | tryptophan:H(+) symporter TnaB |
| RA | 3,937,909 | G→A | A206T (GCG→ACG) | rbsK → | ribokinase |
| RA | 3,937,997 | G→A | G235D (GGT→GAT) | rbsK → | ribokinase |
| RA | 3,938,441 | Δ1 bp | coding (215/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| RA | 3,941,874 | C→T | noncoding (67/1542 nt) | rrsC → | 16S ribosomal RNA |
| RA | 3,946,246 | G→A | noncoding (2543/2904 nt) | rrlC → | 23S ribosomal RNA |
| RA | 3,950,099 | C→T | intergenic (‑130/‑223) | yifB ← / → ilvL | putative magnesium chelatase YifB/ilvXGMEDA operon leader peptide |
| RA | 3,956,003 | G→A | D225N (GAT→AAT) | ilvA → | threonine deaminase |
| RA | 4,043,253 | G→A | W280* (TGG→TAG) | srkA → | stress response kinase A |
| RA | 4,084,932 | G→T | F297L (TTC→TTA) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,139,298 | G→A | A137A (GCC→GCT) | fsaB ← | fructose‑6‑phosphate aldolase 2 |
| RA | 4,160,157 | G→A | L212L (CTG→TTG) | sthA ← | soluble pyridine nucleotide transhydrogenase |
| RA | 4,171,728 | C→T | noncoding (92/120 nt) | rrfB → | 5S ribosomal RNA |
| RA | 4,193,996 | T→G | D70A (GAT→GCT) | thiE ← | thiamine phosphate synthase |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| JC JC | 4,434,629 | IS1 (–) +8 bp | coding (1930‑1937/1944 nt) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| RA | 4,486,869 | T→A | L218M (TTG→ATG) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,532,409 | T→G | intergenic (‑758/+28) | sgcX ← / ← yjhP | putative endoglucanase with Zn‑dependent exopeptidase domain/putative methyltransferase YjhP |
| RA | 4,546,601 | C→T | I502I (ATC→ATT) | fimD → | type I fimbriae usher protein |
| RA | 4,570,611 | C→T | G322S (GGT→AGT) | yjiR ← | fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
| RA | 4,577,507 | C→T | S151N (AGC→AAC) | mcrC ← | Type IV methyl‑directed restriction enzyme EcoKMcrBC subunit |
| RA | 4,579,610 | C→T | E77E (GAG→GAA) | symE ← | nucleoid‑associated protein SymE |
| RA | 4,583,579 | C→T | W1061* (TGG→TGA) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| RA | 4,588,910 | C→T | G57D (GGC→GAC) | yjiX ← | PF04328 family protein YjiX |
| RA | 4,595,093 | C→T | Q253Q (CAG→CAA) | lgoR ← | putative DNA‑binding transcriptional regulator LgoR |
| RA | 4,595,749 | C→T | A35T (GCG→ACG) | lgoR ← | putative DNA‑binding transcriptional regulator LgoR |
| RA | 4,597,626 | C→T | A606T (GCG→ACG) | opgB ← | phosphoglycerol transferase I |
| RA | 4,608,401 | C→T | P73S (CCT→TCT) | rimI → | protein N‑acetyltransferase RimI |
| RA | 4,619,121 | (CG)4→3 | coding (893‑894/1323 nt) | deoA → | thymidine phosphorylase |
| RA | 4,619,389 | G→T | A387A (GCG→GCT) | deoA → | thymidine phosphorylase |
| RA | 4,624,763 | C→A | R9R (CGG→CGT) | ytjB ← | putative inner membrane protein Smp |
| RA | 4,627,574 | C→T | A87V (GCC→GTC) | nadR → | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR |
| RA | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| RA | 4,638,240 | G→A | L21L (TTG→TTA) | creD → | putative inner membrane protein CreD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196361 | 1211465 | 15105 | 3 [2] | [2] 3 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 1428202–1428267 | 1428334 | 68–133 | 3 [2] | [2] 3 | insH5 | IS5 family transposase and trans‑activator |
| * | * | ÷ | NC_000913 | 1632757 | 1633492–1633239 | 483–736 | 4 [2] | [2] 3 | ynfT–ydfK | ynfT,ydfK |
| * | * | ÷ | NC_000913 | 1978495 | 1979270–1978503 | 9–776 | 31 [0] | [0] 18 | insB5–insA5 | insB5,insA5 |
| * | * | ÷ | NC_000913 | 3423891–3424232 | 3426608–3424238 | 7–2718 | 3 [2] | [1] 3 | rrlD | 23S ribosomal RNA |
| * | * | ÷ | NC_000913 | 3796866 | 3808048 | 11183 | 3 [2] | [2] 3 | [waaC]–[waaQ] | [waaC],waaL,yibX,yibX,yibY,waaU,waaZ,waaY,waaJ,waaO,waaB,waaS,waaP,waaG,[waaQ] |
| * | * | ÷ | NC_000913 | 3808272 | 3808450 | 179 | 3 [2] | [0] 3 | rirA/waaA | small regulatory RNA RirA/KDO transferase |
| * | * | ÷ | NC_000913 | 3817793 | 3818005 | 213 | 5 [0] | [0] 5 | dinD | DNA damage‑inducible protein D |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 244134 = | 32 (0.760) | 32 (0.790) | 28/464 | 0.4 | 44.2% | intergenic (+13/‑193) | gmhA/yafJ | D‑sedoheptulose 7‑phosphate isomerase/putative glutamine amidotransferase YafJ |
| ? | NC_000913 | = 377392 | 50 (1.230) | intergenic (+81/+143) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
| * | ? | NC_000913 | = 249545 | 83 (1.970) | 54 (1.320) | 50/468 | 0.1 | 42.8% | intergenic (+1411/‑1353) | rayT/dinB | REP‑associated tyrosine transposase/DNA polymerase IV |
| ? | NC_000913 | 373870 = | 64 (1.570) | coding (950/951 nt) coding (3/1014 nt) |
mhpF mhpE |
acetaldehyde dehydrogenase (acetylating) MhpF 4‑hydroxy‑2‑oxovalerate aldolase |
|||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 31 (0.740) | 31/482 | 0.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1978494 | 0 (0.000) | intergenic (‑297/+24) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB | |||||
| * | ? | NC_000913 | 1979271 = | 0 (0.000) | 18 (0.430) | 17/482 | 1.0 | 100% | intergenic (‑56/‑482) | insA5/uspC | IS1 family protein InsA/universal stress protein C |
| ? | NC_000913 | = 2102947 | NA (NA) | pseudogene (443/446 nt) | wbbL | interrupted rhamnosyltransferase WbbL | |||||