| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,890,626 | G→A | L425F (CTC→TTC) | cysJ ← | sulfite reductase, flavoprotein subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,890,626 | 0 | G | A | 95.5% | 210.0 / NA | 68 | L425F (CTC→TTC) | cysJ | sulfite reductase, flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (36/28); minor base C (3/0); total (40/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAGCGCTGCCACTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAGGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTATCGCCCACC > NC_000913/2890384‑2890867 | gTAGCGCTGCCACTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTgg < 2:163294/251‑1 (MQ=255) aGCGCTGCCACTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGGTAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTgg > 1:82335/1‑249 (MQ=255) gcTGCCACTCCCCCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGGTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGca < 2:59626/251‑1 (MQ=255) gCCACTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGcac < 1:42502/249‑1 (MQ=255) cTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCgg > 1:28721/1‑251 (MQ=255) aaaGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAAc < 1:232383/251‑1 (MQ=255) aaaGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAAc > 1:94062/1‑251 (MQ=255) tGCGGATTACCAACGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGcac > 2:197426/1‑251 (MQ=255) gCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGcacc < 1:316634/251‑1 (MQ=255) ggATTACCAAAGAACAGCCAGTGTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGAAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTCTCGTTATGTTCGATAAATACGCGGACTTATCCCTCTTCTTCCACGCGGTCAGCGAGGAAGATGGAGGCACCACCGGCACGGGCGCGGCCTTCCTCGTCGTAACGcacca > 2:83021/1‑250 (MQ=255) aTTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATACAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGCAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGcaccacac > 2:56541/1‑251 (MQ=255) aGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCCCCACACCAACggcg > 2:92583/1‑249 (MQ=255) aGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACgtg > 1:397646/1‑251 (MQ=255) ggcggcGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCg > 1:136927/1‑251 (MQ=255) gcggcgCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGTTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACATGTACTTCGTTCTCGACTTCCGCCTGCga < 1:162116/251‑1 (MQ=255) cgTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGc > 1:259950/1‑251 (MQ=255) tgctgcATAAAGGAGCGGAACGGCGCAATACCGGTGCCGGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGTGGAAGTTATCGTTATGTTCGATAAATACGCGGACTGCGCCCTCTTCCTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCTCCGGCACGGGCGCGTCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGTCTTCCGCCTGCGAGGAGGCGa < 2:73762/250‑1 (MQ=255) ctgcATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATgg > 2:66389/1‑251 (MQ=255) cgcgGAACGACGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGAcgc > 1:86288/1‑251 (MQ=255) gcgGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGAcgcg < 1:234715/251‑1 (MQ=255) ggAACGGCGCAATCCCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGAGGACGATATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGACGAACCTGGAGGCACCACCGGCACGGGCGCGGCCTTCACCGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGCATTCCGCCTGCGAGGAGGCGATGGAATACAGACgcggg > 2:402376/1‑250 (MQ=255) gAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACgcggcg > 2:79345/1‑251 (MQ=255) cGGCGCAATACCGGTGCCTGGACCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTCCTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTc > 2:319052/1‑250 (MQ=255) gTGCCTGGGCCAATCAGAATCGCCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGAGGGAATACAGACGCGGCGTCAGCGGGCGcagcag < 2:223052/251‑1 (MQ=255) gCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCCGCGGGCgcagc > 1:398971/1‑247 (MQ=255) gggCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCTCCACACCAACGGTTACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGattaat < 1:97593/251‑1 (MQ=255) gggCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGatta < 1:245701/249‑1 (MQ=255) ggCCAATCATAATCACCGGGGTTTCTGGAGTGGCTGGCAGGCGGAAGTTATCTGTATGTTCGATAAATACCCGGCCTTCGCCCTCTTCGTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTGCCGCCTGCGAAGAGGCGATGGCATACAGACGCGGCGTCAGCGGGCGCAGCAGattaatt < 2:310416/251‑1 (MQ=255) ccAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGattaatt > 2:113145/1‑249 (MQ=255) aagcgtAATCACCGGGGTTTCGGGATTGGCTGGCAGGCGGAAGTTATCGGTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTGCCACGCGGTCAGCGAAGAAGCTGGAGGCCCCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTGCTCTACTTCCGCCTGCGAGGAGGGGATGGAATACAGACGCGGCGTCAGCGGGCGCAGAACAGTAATTAgcg < 2:57053/246‑1 (MQ=255) aaTCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAgcg < 1:63908/251‑1 (MQ=255) ccGGGGTTTCTGGAGTGGCTGGAATGGGGAAGTTATCGGTATGTTCGATAAATACGCGGACTTCGCCCTCGTCTCCCACGCGGTCAGCGAAGAAGCGGGAGGCACCACAGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGACTGCGAGGAGGCGATGGAAGACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCa < 2:417926/251‑1 (MQ=255) gTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGTAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCtg < 2:397646/251‑1 (MQ=255) ctggcAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGaa > 1:23935/1‑250 (MQ=255) tggcAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAAc > 1:413949/1‑251 (MQ=255) gCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCAcc > 2:104693/1‑250 (MQ=255) ggAAGTTATCGTTATGTTCGATAAATACGCGGACTGCGCCCTCTTCTTCCACGCGGTAAGCGAAGAAGCTGGCGGCACCACCGGCACGGGCGCGGCCTTCCACGACGTAACGCACCACACCAAAGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGACGATGGCATACAGACGCGGCGTCATCGGGCGCAGCAGATTAATTAGCGCTTCGGCCTCATGCTCTGCCGGGGAGCAACGCCCCATg > 2:322632/1‑251 (MQ=255) gAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGt > 2:250615/1‑251 (MQ=255) aaGTTATCGTTATGTTCGATAAATACGCGGACTTCGCGCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCGCCGGCACGGGCGCGGCCTTCCACGTCGTAACGCCCCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTTCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTc < 2:357996/251‑1 (MQ=255) gTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGACGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGCGAAACGCCCCATGTcac > 2:338824/1‑250 (MQ=255) tATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGCTGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTcaac > 2:3988/1‑250 (MQ=255) atttgtATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGCCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACTGTGACGTGTACTTCGTTCTCGACTTCCGCCGGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATGAATTATCGCTTCGGCATCAATCTGTGCCGGTGAGAAACGATCCATGTcaaca < 2:198074/245‑1 (MQ=255) gTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCa > 1:332876/1‑92 (MQ=255) gTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCa < 2:332876/92‑1 (MQ=255) tATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGc > 1:167868/1‑251 (MQ=255) aTGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGcg < 1:44887/251‑1 (MQ=255) aTGTTCGAGAAATACGCGGACGTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCAGGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCGGTTCCGGGGATAAACGCACCATGTCAACAATCGGc < 2:314045/250‑1 (MQ=255) cggtAAATACGCGGGCTTCGCCCTCTTCTTCCACGCGGTCAGCGACGAAGCTGGAGGCACCACCGGCACGGACGCGGCCTTCCACGTCGTAACGCACCACACCAACGGCGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAAACGCGGCGTCAACGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCGCCATGTCAACAATCGGCgtcgtc > 2:357622/4‑251 (MQ=255) cGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCgtcgtc > 1:385856/1‑251 (MQ=255) cGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGAGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGCGAAACGCACCATATCACCACTCGGCgtcgtc > 1:373235/1‑251 (MQ=255) gATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGtcgtcg < 1:109082/251‑1 (MQ=255) gATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCAACACCGGCACGGGCGCGGAATTCCACGTCGTAACGCAACACAACAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGAAGATTAATTAGCGCATCGGCATCAAGCTGTGCCGGGGAGAAACGCACAATGTCAACAATCGGcgtcgt > 1:249804/1‑249 (MQ=255) aTAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTcgc < 1:113145/251‑1 (MQ=255) aTAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTAAGGCATCAAGCTGTGCCGGGGAGAAACGCAACAGGTCAACAATCGGCGTCGTcgc > 1:17378/1‑251 (MQ=255) aaTACGCGGACTTCGCCCTCTTCTTCCACGCTGTCAGCGAAGACGCTGGAGGCACCACCGACACGTGAGCGGCCTGCCACGTCGTAACGCACCACACCAACGGTGCCGTGTACTTCGTCCTCGACTTCCTCCTCCGAGGCGGCGCTGGAATACAGACGCAGCCTCATCGCGCGCAGCGCATTAATTAGCGCTTCGCCATCAAGCTGTGCCGGGGAGAAACGCACCATCTCAACAATCGGCGTCGTCgcggc > 1:385565/1‑251 (MQ=255) aTACGCGGACTTCGACCTATTCTTCCCCGCGGTCAGCGAAGAAGCTGGAGGCCCCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGcc > 1:104838/1‑131 (MQ=255) aCGCGGACTTCACCATCTTCTTCCACCCGGTCAGCGCAGACGCTCGAGGCAACACCGGCACGGGCGCGGCCCTCCACGCCGTAACGCACCACACCCACGGTGCCGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACCGACGCGGCGTCAGCGGGCGCAGCAGATGCATTAGCGCTTCGGCATCAAGCTATGCCGGGCAGAAACGCACCATGTCAACAATCGGCGACGTCGCGGCGt > 2:270908/1‑250 (MQ=255) cgcgGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGCCTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTa > 1:437747/1‑250 (MQ=255) cgGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGCGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATg > 2:261864/1‑251 (MQ=255) gtcTTCTCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCGTCCCCGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCCCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGTCGTAATGCt < 2:414666/249‑1 (MQ=255) cGCCCTCTTCCTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTaa < 1:418575/250‑1 (MQ=255) gCCCTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACt < 1:10626/251‑1 (MQ=255) cccTCTTCTTCCACGCGGTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACtt < 1:75883/251‑1 (MQ=255) ccTCTTCTTCCACGCGGTCAGCGAAGAAGATGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAAAAATCGGCGTCGTCGCGGCGTAATGCTGTAAcgtc > 2:438604/1‑248 (MQ=255) tcctcgcgGTCAGCGAAGAAGCTGGAGGCACCACCGGCGCGGGCGCGGCCTTCCACGGCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATATAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTAt < 2:92209/246‑1 (MQ=255) ggTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTATCGCccacc > 2:93416/1‑251 (MQ=255) gTCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTATCGCccacc > 2:337534/1‑250 (MQ=255) tCAGCGAAGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTATCGCccacc > 2:426950/1‑249 (MQ=255) | GTAGCGCTGCCACTCCACCTGGTACAGGAAGTCTTCCGTAAAGTGCGGATTACCAAAGAACAGCCAGTTTTTACCTGGCGCTTCGTCGGCGGCGCGTTGCTGCATAAAGGCGCGGAACGGCGCAATACCGGTGCCTGGGCCAATCATAATCACCGGGGTTTCTGGATTGGCTGGCAGGCGGAAGTTATCGTTATGTTCGATAAATACGCGGACTTCGCCCTCTTCTTCCACGCGGTCAGCGAGGAAGCTGGAGGCACCACCGGCACGGGCGCGGCCTTCCACGTCGTAACGCACCACACCAACGGTGACGTGTACTTCGTTCTCGACTTCCGCCTGCGAGGAGGCGATGGAATACAGACGCGGCGTCAGCGGGCGCAGCAGATTAATTAGCGCTTCGGCATCAAGCTGTGCCGGGGAGAAACGCACCATGTCAACAATCGGCGTCGTCGCGGCGTAATGCTGTAACTTCGCTTTATCGCCCACC > NC_000913/2890384‑2890867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |