| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,794,325 | C→T | Y113Y (TAC→TAT) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,794,325 | 0 | C | T | 98.2% | 177.5 / NA | 55 | Y113Y (TAC→TAT) | rfaD | ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (25/29); minor base G (1/0); total (26/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACGGCACCAAGTTTGTGAACCTGGTGGATCTGAATATCGCAGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCAGCTTAA > NC_000913/3794089‑3794564 | gACGGCACCAAGTTTGTGAACCTGGTGGATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGcggc < 1:171138/251‑4 (MQ=255) ggCACCAAGTTTGTGAACCTGGTGGATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCAc > 2:330023/1‑251 (MQ=255) cACCAAGTTTGTGAACCTGGTGGATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTGCCACGAAGGCGCATGCTCTTCCACCAGCGAGGGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCGGTTCCTGTATGCAGCGTCCGCGGCCACCt < 1:146211/251‑1 (MQ=255) aaGTTTGTGAACCTGGTGGATATGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCAACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGAGCGAAATCCCGTTCATGTAGGCATCTTACGCGGCCACCTAcgg > 1:165330/1‑251 (MQ=255) tgtgAACCTGGTGGATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGAc > 1:256254/1‑251 (MQ=255) ccTGGTGGATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCAccc > 1:71251/1‑250 (MQ=255) ggtggATCTGGATATCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCg > 1:108466/1‑251 (MQ=255) ggatatCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTAt < 2:103130/247‑1 (MQ=255) ggatatCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGGCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCGCCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTAGCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAACCCCGTTCCTGGATGCATCTTACGCGGCCACCTACGGCGGACGCATCTCCGCCtt < 2:385571/244‑1 (MQ=255) ggatatCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGAAGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATTGCAAGTATATGATGGATAACAACTATCATTACTCCAAAGAGCTATTGCACTACTGTCTGGAGCGCGAAATACCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCAGACGCACCTCCGACTTTATTg > 1:81556/3‑251 (MQ=255) tatCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGCCGCACCCCCGGCttt > 2:207623/1‑244 (MQ=255) tatCGCGGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACttt < 1:207623/244‑1 (MQ=255) aaatGGATAAGGAAGACGTCCTGATCCAGATTAGGGCTGGCGAAGAGTGCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTACACGACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGt < 2:81556/247‑1 (MQ=255) gAAGATTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAACGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGACAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTACTGCACTACTGTCTGGAGCGCGAACTCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCCACTTTATTGAATTCCGCGAGTAAGAAAAACCGtt > 1:51677/1‑251 (MQ=255) tGATCCAGATTATGGCTGGCGAAGAGTTCGGCGCTGTCGAAGCGCTTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTTTTTAATCCCGCGGTTACGAACAACCGTTGAACGTCTAc > 2:138722/1‑251 (MQ=255) gATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACg < 2:384328/251‑1 (MQ=255) gATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGGGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGAATTTTTTTAATCCCGCGGGGACGCAAAAACGTTTAACGTCTACGGTTACt > 2:239518/1‑251 (MQ=255) tATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGCCTTTATTGAATCCCGCGCGTACGAAAAACCGTTTAACGTCTACGGTTACTCa > 2:251807/1‑250 (MQ=255) aTGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCaaa < 1:301444/251‑1 (MQ=255) gctggcGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATACCAACTATAAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGTATCCCGCGAGGACGAAAAACCGATGAACGTATACGGGTACTCAAAAtt > 1:282498/1‑251 (MQ=255) gcGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTg < 2:238543/251‑1 (MQ=255) gcGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTg < 1:435384/251‑1 (MQ=255) cGAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGt < 1:251807/250‑1 (MQ=255) gAAGCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATCCTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGCCTTTATTTAATCCCGCGAGTACGAAAAACCGGTGAACGTCCCCGGTTACTCAAAATTCCTGTTTGCTGAATATGTTCGTc > 2:385/1‑250 (MQ=255) gCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAt > 2:144672/1‑251 (MQ=255) gCGATTTTCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAt < 1:289460/251‑1 (MQ=255) tttCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGCTGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGCTGAATATGTTCGTCAAATcctgc > 2:63012/1‑251 (MQ=255) tttCCACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctg < 2:14012/250‑1 (MQ=255) ccACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTTGAGCGCGAAATCCCGTTCCTGGATGCATCTTCCGCGGTCACCTACGGCGGACGCCCCTCCGACTTTAGTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTTCGGGTACGCAAAAGTCCTGTTTCATGAATATGTTCGTCAAATcctgcct < 2:189585/250‑1 (MQ=255) ccACGAAGGCGCATGCTCTTCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTGTGATGAATATGTTCGTCAAAGcctgcctg < 2:306845/251‑1 (MQ=255) tCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAAGCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATGCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACGCGCAGAttg < 2:220194/250‑1 (MQ=255) tCCACCACCGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTGATTGAATCCCGCTAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAAGGCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAt < 1:34762/248‑1 (MQ=255) ccaccGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGc > 1:253481/1‑251 (MQ=255) cGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGCAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGCCGCACCTCCGACTTTCTTGAATCCCGCGCGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGGCAAATCCTGCCTGAAGAGCACTCGCAGATTGTTCGCTTcc > 2:353709/1‑251 (MQ=255) cGAGTGGGATGGCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTcc < 1:315143/251‑1 (MQ=255) ggCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCa > 2:14614/1‑250 (MQ=255) ggCAAGTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCa > 1:380609/1‑250 (MQ=255) gTATATGATGGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGttt < 1:394800/251‑1 (MQ=255) atctgatgGATAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAAGCCCGTTCCTGTATGCATCTTCCGCGGCCTCCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGATCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTa < 2:245934/247‑1 (MQ=255) aTAACAACTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTTAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACTTTTATGGACCGCGt < 1:59596/251‑1 (MQ=255) acTATCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGc < 1:209972/251‑1 (MQ=255) aTCAATACTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAGCCTGCCTGAAGCGAACTCGCAGAGTGTGGGCTGCCGGTAGTTCAACGTTTATGGACCGCGTGAAGGcc < 2:280302/249‑1 (MQ=255) aCTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATc > 1:22142/1‑103 (MQ=255) aCTCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATc < 2:22142/103‑1 (MQ=255) tCCAAAGAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCCTCTTCCGCGGCCCCCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGACAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGgc > 2:334961/1‑249 (MQ=255) aagAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCAtt < 2:14095/249‑2 (MQ=255) aagAGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATg > 2:313833/3‑251 (MQ=255) aGCTGCTGCACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTcc < 1:222783/201‑1 (MQ=255) gctgcACTACTGTCTGGAGCGCGAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCg > 2:166901/1‑251 (MQ=255) actGTCTGGAGCGCGAAATAACGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGCGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGCCAAATCCTGCCTGAAGCGCAATCGCAGATTGTTGGCTTCCGTTCTTTACACGTATATGGACAGCGTGAAGGCCATAAAGGCAGCATGGCGTGCGGCGCTTTc > 2:93519/1‑251 (MQ=255) tgtctggagagcgacaTCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTcc > 1:139639/16‑250 (MQ=255) ggAGCGCGAAATCCCGTTCCTGGATGCATCTTCAGCGGACACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGGTACTCAAACTTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTTGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATTGCGAGCGTCGCTTTCCAtctc > 2:296847/1‑250 (MQ=255) gcgcgAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAaca < 1:239518/247‑1 (MQ=255) gAAATCCCGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGGCAAAGCCTGCGTGAAGCGAGCTCGCATATTGTTGGCTTGCGTTAGTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCa < 1:252257/251‑1 (MQ=255) ccGTTCCTGTATGCATCTTCCGCGGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCAGCTTaa < 1:63012/251‑1 (MQ=255) | GACGGCACCAAGTTTGTGAACCTGGTGGATCTGAATATCGCAGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCAGCTTAA > NC_000913/3794089‑3794564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |