| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,155,880 | C→T | L206L (CTC→CTT) | mdtB → | multidrug efflux pump RND permease subunit MdtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,155,880 | 0 | C | T | 98.7% | 221.4 / NA | 76 | L206L (CTC→CTT) | mdtB | multidrug efflux pump RND permease subunit MdtB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (39/36); minor base G (0/1); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCAACTTGTTGCCGAGCGATCTGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAGAA > NC_000913/2155635‑2156123 | cacaaatttttgccgagcatactcccTAACCCCCCCGG‑TTTACAGCAAAGTGACCCC‑GG‑CAGATCCGCCGATCATGCCGCCCGCCGTCCCCCC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGcc < 1:57346/227‑1 (MQ=255) cAACTTGTTGCCGAGCGATCTGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCAACTA‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTAGCGTCAAACTTAACGCTCAGGCGCTTGACGCCCTTGGCCTgc > 1:418177/1‑250 (MQ=255) accTTGTTGCCGAGGGTTCTGCC‑AACCCCCC‑GGGTTTACACAAAAGTGAACCC‑GG‑CAAACCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGAc < 1:105924/249‑1 (MQ=255) cTTGTTGCCGAGCGATCTGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGAcc > 1:298375/1‑250 (MQ=255) tgttgCCGAGCGATCTGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTAACCTC‑AACCGCCATGCAGAGGACGCCAGAGGAAGATATGGTGGCAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGGGAAGCTTTCCGCCGGTCAGCGTCCGGCTGGTCGCGTCAAACTTAAGACTCAGGCGAGTGCCGCCCATGGCCTGAcccgc > 1:195027/1‑248 (MQ=255) gtgccggggcatccccccacccccGCC‑GG‑TTAACAG‑AAAGGGAACCCCGG‑AAGACCCGCCGATCATGCCGCGCGCCGTCACCTC‑ACCCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGc < 1:305010/229‑1 (MQ=255) cGAGCGATCTGCCTAACCCGCC‑GG‑CTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAAcc > 2:251423/1‑251 (MQ=255) cgcccTACCCCGCC‑GG‑TTTACAGCAAAGCGACCCC‑GG‑CAGACGCGCCGCTCATGACCCCCCCCCACCCCCA‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCAc < 2:8153/248‑1 (MQ=255) tGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCAcc > 2:91794/1‑251 (MQ=255) g‑TTTACAGCAAAGTGAACCC‑GG‑CAGAACCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGCCGCAAGTGGAAGATATGGTGCAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGAACAGCGAACCCGTGCGCACCGCCATTACCGgcgc > 1:192979/1‑251 (MQ=255) tttACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCt > 1:361983/1‑251 (MQ=255) ttacaaaaaagtaaCCC‑GGGCAGCTCCGCCGTTCATGCCCCTCCCCGTCCCCTA‑ACCCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCt < 1:434532/238‑1 (MQ=255) cAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGCAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTACCGtt > 2:282734/1‑250 (MQ=255) gTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTc > 1:247730/1‑251 (MQ=255) gAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCgg > 1:34829/1‑251 (MQ=255) cggtcccgccgATCATGCCGCTCGCCG‑CCCCTCCAACCGTCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTCCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGt < 1:71608/246‑1 (MQ=255) gccgATCATGCAGCTCGCCGTCCACTC‑AACCGCCATGCCGATACCGACAGTGGAAGATGTGGTGGAAACCAGCGTCGCCCAGAAAA‑TCTAGCAGATTTCAGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGCTTGCAGCCCTTGGCCTGACACGCGAAACCGTGCGCACCGCCATTCCCGGCGCTCACGTTCACTCGGCACAAGGCAGCCTCg > 2:393158/1‑251 (MQ=255) gATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACg > 1:15975/1‑251 (MQ=255) aTGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc > 2:262003/1‑243 (MQ=255) gACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGGAGCCTCGACGGCCCtt > 2:74846/1‑251 (MQ=255) gTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGCCCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGAAAAAGGTAGCCTCGACGGCCCTTCCCGCGCggc > 2:162945/1‑250 (MQ=255) gTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGt > 1:405104/1‑251 (MQ=255) gTCACCTC‑AACAGCCAAGCCGATGACGCAAGTGGAAGATCTGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCAGGCGGCGGCCTGATGCCGCTTTCCGGAGGTCAACGTCCGGCTGTTCGCGTCAAAATTAACGCACAGGCGCATGCCGCCCTTGGCCCGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGTTAACGTTAACTAGCCAAAAGGTAGCCTCGACGGCCATTCCCGTGCGGt > 2:146628/1‑251 (MQ=255) cccccccaacccGCCATGCCGATGACGCAAGGGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGt < 2:149634/241‑1 (MQ=255) cACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGGAGCCTCGACGGCCCTTCCCGTGCGGTcc > 2:372147/1‑250 (MQ=255) aCCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCAGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGAAGCCTCGACGGCCCTTCCCGAGCGGTCAc > 1:418718/1‑251 (MQ=255) ccGCCATGCCGATGACGGAAGTGGAAGATAGGGTGTAAACCCGCGTCGCGCAGAAAA‑TCCCGCAGATGTCCGGCGTCGGCCTGGTGACGGTTTCCGGCGGTCAGCGTCCGGCGGTTCGAGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCTCGACCAGGGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTGAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTcc < 1:402980/251‑1 (MQ=255) ccATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGCAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCcgcg > 1:278210/1‑251 (MQ=255) cATGCCGGTGACCCAAGGGGAAGATGGGGGTGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGTTTCCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCGGTGCGCTTCAAACTAAACGCTCAGTCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGGGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGa < 2:405104/251‑1 (MQ=255) ggCCGATGACCCAAGTGGAAGATATGGTGGAACCCCGCTCCGCGCAGAAAA‑TCTCGCAGATTCCCGGCGCCGTCCTGTTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAAc < 2:15831/250‑1 (MQ=255) cGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAc > 1:294079/1‑251 (MQ=255) aCGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAcc > 1:32037/1‑247 (MQ=255) aggggagattatGGTGGAAACCCGCTTCTCG‑AGAAAAACCGCGCAGAGTTCCGGGGGTGGCATGGTGACGCTGTCCGCGGGCCAGCGCCCGGCGGTTCGCGTCAAACTTAACGCTCAGGCGATGGCCGCCCTTGGCCTGACCATCTAAACCTTGCGCCCCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCGCGCCGGCCCTTCCCTTGCGGTCACGCTTTCCGCGAGCGGCCAGATGct < 2:33182/240‑2 (MQ=255) ggAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc > 2:131180/1‑199 (MQ=255) ggAAGATAGGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc < 1:131180/199‑1 (MQ=255) accccGCGTCGCTCAAAAAT‑TCCCGCAGAGTCCCGGCGCCGGCCGGGGGACGCTTTCCGGCGGTCAGCGTCCGGCTGTGCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGcc < 2:103954/249‑1 (MQ=255) cccGCGGCGCGCAGAAAA‑GCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCGTTCCGGCGGCCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAg < 1:227405/251‑1 (MQ=255) ccGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGc > 1:121269/1‑251 (MQ=255) ggTCGCGCAGAAAA‑GCTCGCAGATTGCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTaa < 1:257411/250‑1 (MQ=255) cgcAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAatcatc < 1:372147/251‑1 (MQ=255) gcAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCg > 1:297947/1‑251 (MQ=255) aaaa‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCCTCGCCt > 2:112292/1‑250 (MQ=255) aaaaccgcGCAGATTTCCGGCGCCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTa < 1:8115/244‑1 (MQ=255) aa‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTAcc > 2:372796/1‑251 (MQ=255) ctcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCCAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGCGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTaaccg > 2:411778/1‑246 (MQ=255) cAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTCACTCGGCAAAAGGTAGCCTCAACGGCCCTTCCCGTGCGGTCAAGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGAATCGCCAGCTAATCATCGCCTACCAGAACgg > 1:401448/1‑251 (MQ=255) aTTTCCGGCGTCCGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGCATCGCCAGCTAATCATCGCCTACCAGAACGgcgc > 2:222050/1‑251 (MQ=255) ttgccGGCGTCGGCCTGGGGACGGTTTCCGGGGGCCAGCGCCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACTCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTAGCAGAACGgcgc < 2:63943/247‑1 (MQ=255) ttCCGGGGTCGGCCTGGGGACGCTTCCCGGCGGTCAGCGGCCGGCTGTTCGCGTCAAACTGAGCGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAGCCGTGCTCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCGCGACGGCCCGTCCCGTGCGGTCACGCTGTCGGCGAACGACCAGAGGCAAGCCGCCGAGGAGTATCACCAGGTAATCATCGCGTACCAGAGGGgcgcg < 2:67768/250‑1 (MQ=255) ttCCGGCGTCGGCCTGGTGACCCTTCCCGGCGGTCAGCGGCCGTCTGTTCGCGTCAAACTTACCGCTCAGGCGATTGCCGCCTTTGGCCTGACCGGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTGCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcg < 2:377044/250‑1 (MQ=255) cccGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAACCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGcc < 1:282734/250‑1 (MQ=255) ggTCGGCCTGGTACCGCTTTCCGGCGGCCAGCGTCCGGGTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCGACCAGAACGGCGCGCCAATTc < 2:28802/250‑1 (MQ=255) cGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCACTTCGTc > 1:56288/1‑251 (MQ=255) ggCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCACACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGCAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCCATCCGCCGAAGAGTATc > 1:71617/1‑208 (MQ=255) gCCTGGGGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACGTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTg < 1:287411/251‑1 (MQ=255) ccgcttgccggctgtatgtgcccGGCTGTCCGCGCCAATCTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCGGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCTTCTGGGCGATGt < 2:356184/230‑1 (MQ=255) ggcggTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGACCGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGt > 2:312899/1‑251 (MQ=255) ggcggTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGt > 1:368902/1‑251 (MQ=255) ggTCGGCGTCCGGCTGTTCGCGCCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTaga < 2:247730/251‑1 (MQ=255) ggTCCGCGTCCGGCTGTTCGCGACAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTaga < 2:124821/251‑1 (MQ=255) ggTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCCCCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTaga < 2:110783/251‑1 (MQ=255) cgccTGTTCGCGTCAAACTTAACTCCCGGGCGATTGCCGCCTTTGGCCGGACCAGCGAACCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCTGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGGCGCAACTGTAGAGCAAGGTGCa < 2:362079/248‑1 (MQ=255) ggCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAg < 1:24740/251‑1 (MQ=255) cgTCAACCTTAACGCACAGGCGATGGCCGCTCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCt < 1:134396/251‑1 (MQ=255) aaaCTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCt < 2:102931/251‑1 (MQ=255) aaaCTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGGGCAGAAAACAGCTGGcc > 2:241541/1‑250 (MQ=255) aCTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCg > 1:94879/1‑251 (MQ=255) aCTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCg < 1:183792/251‑1 (MQ=255) cTTAACGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGCAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGGAGCCTCGACAGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACAAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCCACTGTAGAGCAAGGTGCAGAAAAAAGCTGGCACgg > 2:264844/1‑251 (MQ=255) taccGCTCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCGTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCgg < 2:325817/246‑1 (MQ=255) gcccagtcgagtGCCGCCCTTGGCCTGACCAGCCAACCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTg < 2:368159/240‑1 (MQ=255) tCAGGCGATTGCCGCCCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAAAAGCTGGCCCGGCGCGTggg > 2:94922/1‑251 (MQ=255) cGATTGCCGCCCTTGGCCTGCCCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGAAGCCTCGACGGACCTTCCCGCGCGGTCACGCTTACCGCGAACGACCAGATGCAATCCGCCGAAGAGTATAGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGAGCGATGTCGCAACTGTAGAGCAAGGAGCAGAAAACAGCTGGCTCGGCACGTGGGCGatc > 1:169567/1‑249 (MQ=255) gATTGCCGCCCTGGGCCGGACCAGCGAACCCGTGCCCCCCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTATAGCAAGGTGCAGAAAACAGCGGGCTCGGCGCGTGGGCGAACa < 2:56288/251‑1 (MQ=255) gccgccCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAg < 2:32037/250‑1 (MQ=255) ccgccCTTGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAGaa < 1:221477/251‑1 (MQ=255) | ACCAACTTGTTGCCGAGCGATCTGCCTAACCCGCC‑GG‑TTTACAGCAAAGTGAACCC‑GG‑CAGATCCGCCGATCATGACGCTCGCCGTCACCTC‑AACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAA‑TCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAGAA > NC_000913/2155635‑2156123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |