Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,789,755 C→T M109I (ATG→ATA waaH ← UDP‑glucuronate:LPS(HepIII) glycosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,789,7550CT98.0% 166.7 / NA 51M109I (ATG→ATAwaaHUDP‑glucuronate:LPS(HepIII) glycosyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (20/30);  minor base G (0/1);  total (20/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

CCTGATGATGTAATCCGGCAATAAATTTAATGTTATTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCCATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAAT  >  NC_000913/3789511‑3789997
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
ccTGATGATGTAATCCGGCAATAAATTTAATGTTATTTTTAACAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGtc                                                                                                                                                                                                                                              <  1:290308/251‑1 (MQ=255)
      gatgTAATCCGGCAATAAATTTAATGTTATTTTTAACAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGc                                                                                                                                                                                                                                        >  2:312700/1‑251 (MQ=255)
                      aaaTTTAATGTTATTTTTCACAATAACAGCGCGGCGATAAACCCCCAGCCAGACAACGTGATGCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGTATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCTCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTGTCGTACAtggtgt                                                                                                                                                                                                                        <  2:287523/251‑2 (MQ=255)
                            aaTGTTATTTTTAACAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGa                                                                                                                                                                                                                  <  1:353798/251‑1 (MQ=255)
                                ttATTTTTAACAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTc                                                                                                                                                                                                              >  2:321699/1‑251 (MQ=255)
                                          cAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGc                                                                                                                                                                                                     >  2:330027/1‑250 (MQ=255)
                                          cAATAACATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGATAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGc                                                                                                                                                                                                     >  1:143355/1‑250 (MQ=255)
                                              aaCATCGCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCg                                                                                                                                                                                                 >  1:373896/1‑250 (MQ=255)
                                                 atcgcGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACa                                                                                                                                                                                              >  1:224724/5‑250 (MQ=255)
                                                        cGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGAc                                                                                                                                                                                      <  1:28225/251‑1 (MQ=255)
                                                         gATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGAc                                                                                                                                                                                      >  2:365559/1‑250 (MQ=255)
                                                             aaCCCCCATCCAGACAACGGGAGTCCAACGGCTCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGTTCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTGCACGAAAACACCAGGCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTGACGCTATGGTCATCAGCGTTTCGTGCGGGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATAtt                                                                                                                                                                                 <  1:227458/251‑1 (MQ=255)
                                                                  ccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGccc                                                                                                                                                                            <  2:118638/251‑1 (MQ=255)
                                                                      ccAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAACAGCGACATATTTGCCCGTTg                                                                                                                                                                        >  1:73411/1‑251 (MQ=255)
                                                                                   gTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGGCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATccc                                                                                                                                                           <  2:380229/251‑1 (MQ=255)
                                                                                                aagaaAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGcc                                                                                                                                                                      >  2:137534/1‑227 (MQ=255)
                                                                                                aagaaAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGcc                                                                                                                                                                      <  1:137534/227‑1 (MQ=255)
                                                                                                  gaaAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACat                                                                                                                                                                                    >  2:203213/1‑211 (MQ=255)
                                                                                                  gaaAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACat                                                                                                                                                                                    <  1:203213/211‑1 (MQ=255)
                                                                                                        cccATCCGCAGCCAGTCCGGGCCGGTTAATACAACGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAACGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCCTCGACAAATGCGCAATATTTGCCCGTTGCCACTTCAATCCCACGATTAAGCGCCACAGATgc                                                                                                                                      >  2:248013/1‑251 (MQ=255)
                                                                                                                        ccGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTg                                                                                                                       <  1:430624/250‑1 (MQ=255)
                                                                                                                         cGGGCCGGTTAATACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGAt                                                                                                                     <  2:129354/251‑1 (MQ=255)
                                                                                                                                 ttAATACACCGGTTGAGCGCAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGcaacaa                                                                                                              >  2:43393/1‑250 (MQ=255)
                                                                                                                                   aaTACACCGGTTGAGCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAaac                                                                                                            <  1:312700/250‑1 (MQ=255)
                                                                                                                                               gAGCGAAGGCGAGCGCTGGGGATGGATTGCCAGGTTTCTCCCGTGGCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTACCGCGATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATGTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGAt                                                                                                <  2:312172/250‑1 (MQ=255)
                                                                                                                                                 gCGAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGt                                                                                             <  1:319465/251‑1 (MQ=255)
                                                                                                                                                 gCGAAGGAGATCGCTTGGGATGGATGGCCAGGTTTCTCCCGGTTCACGAAAACTCCAGTCAGCGGTGCACTTCGCCACGGTGAGGTCGTCCCCTAACGCTATGGTCAGCAGCGTTTCGGACATGGTGGGATAGACTTCATCGTCACCATCGACAAAAGCGACATATTTGCCCTGTGCCACTGCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGTAACTAACGTACTTGCGGATatt                                                                                             <  2:334069/251‑3 (MQ=255)
                                                                                                                                                   gAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTg                                                                                                                                                                        <  2:328294/174‑1 (MQ=255)
                                                                                                                                                   gAAGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTg                                                                                                                                                                        >  1:328294/1‑174 (MQ=255)
                                                                                                                                                     aGGCGATCGCTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCTTTGCACTGCTCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCAGTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTc                                                                                         <  2:314166/251‑1 (MQ=255)
                                                                                                                                                              ctGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAAtg                                                                                >  2:161990/2‑250 (MQ=255)
                                                                                                                                                                          tGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGGCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGAGAGTTTTCTGCTTAATGCTTTGCTAttt                                                                     <  2:143355/250‑1 (MQ=255)
                                                                                                                                                                             cAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAAAGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAAc                                                                 >  2:294716/1‑251 (MQ=255)
                                                                                                                                                                                    ctcCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAAtt                                                           >  1:124371/1‑250 (MQ=255)
                                                                                                                                                                                        cGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTGTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCg                                                      <  2:100223/251‑1 (MQ=255)
                                                                                                                                                                                           ttCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGtt                                                    <  1:330027/250‑1 (MQ=255)
                                                                                                                                                                                             cACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGaa                                                 <  1:368637/251‑1 (MQ=255)
                                                                                                                                                                                                gAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCa                                              <  2:373896/251‑1 (MQ=255)
                                                                                                                                                                                                  aaaCACCAGTCAGCGTTGCACTGCGCCACGTCGAGTTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTGCTGCGTAATGCTGTGCTATTTCAACAGAATTATCCGTTGAACCATc                                            <  1:394528/251‑1 (MQ=255)
                                                                                                                                                                                                      acCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGc                                                                                                    >  1:435354/1‑191 (MQ=255)
                                                                                                                                                                                                      acCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTta                                        <  1:365559/251‑1 (MQ=255)
                                                                                                                                                                                                      acCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCGGATGCAACAAACGAACGTGc                                                                                                    <  2:435354/191‑1 (MQ=255)
                                                                                                                                                                                                        cAGTCAGCGTTGCACTGCGCCCCGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGGTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTtaat                                      <  1:338971/251‑1 (MQ=255)
                                                                                                                                                                                                             aGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTtaataata                                  >  1:78490/1‑250 (MQ=255)
                                                                                                                                                                                                              gCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTTAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGGTGAACCATCGTTaataataat                                <  2:292960/251‑1 (MQ=255)
                                                                                                                                                                                                                gTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATg                               >  1:136722/1‑250 (MQ=255)
                                                                                                                                                                                                                   gCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTTATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTGTGCTATTTCAACAGAAGTATCCGTTGAACCATCGTTAATAATAATGAtt                            <  2:24115/250‑1 (MQ=255)
                                                                                                                                                                                                                   gCACTGCGCCACGTCGAGGTCGTCCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAAGAATGAttt                           <  1:114158/251‑1 (MQ=255)
                                                                                                                                                                                                                                    ggTCGTCCTCGAACGCTATGGTCAGCAGCGTTGCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGtt          <  2:157897/251‑1 (MQ=255)
                                                                                                                                                                                                                                     gtcgtcCTCTAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCTCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTTAACCATCGTGAATAATAATGATTTCCAGAGCAGTCCAGGttt         <  2:73411/251‑1 (MQ=255)
                                                                                                                                                                                                                                            tctAACGCTATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATGCTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAAt  >  2:280128/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
CCTGATGATGTAATCCGGCAATAAATTTAATGTTATTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCGCCACGTCGAGGTCGTCCTCTAACGCCATGGTCATCAGCGTTTCGTACATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAAT  >  NC_000913/3789511‑3789997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: