breseq  version 0.39.0   mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal read alignment evidence
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,173,363	0	C	.	79.0%	43.5 / 13.3	19	intergenic (‑490/+919)	gatD/gatB	galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component
*	NC_000913	2,173,364	0	C	.	79.0%	44.1 / 12.6	19	intergenic (‑491/+918)	gatD/gatB	galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component
*	NC_000913	3,875,532	0	A	T	33.3%	23.8 / 14.9	27	H32L (CAT→CTT)	yidX	putative lipoprotein YidX
*	NC_000913	2,171,384	0	A	C	32.3%	41.5 / 26.4	31	K285Q (AAG→CAG)	insF5	IS3 element protein InsF
*	NC_000913	995,498	0	A	G	32.2%	95.1 / 11.8	59	F164S (TTC→TCC)	ssuD	FMNH2‑dependent alkanesulfonate monooxygenase
*	NC_000913	3,520,751	0	G	T	27.5%	51.5 / 10.2	41	T90K (ACA→AAA)	hofP	DNA utilization protein HofP
*	NC_000913	4,161,142	0	C	A	26.5%	39.4 / 10.4	34	Q26K (CAA→AAA)	fabR	DNA‑binding transcriptional repressor FabR
*	NC_000913	2,950,173	0	A	G	24.2%	135.8 / 10.1	67	E311G (GAG→GGG)	argA	N‑acetylglutamate synthase
*	NC_000913	1,466,276	0	T	C	22.2%	87.3 / 11.2	54	pseudogene (885/2518 nt)	ydbA	putative outer membrane protein, N‑terminal fragment