| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,815,024 | A→G | E177E (GAA→GAG) | slmA → | nucleoid occlusion factor SlmA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,815,024 | 0 | A | G | 98.3% | 189.0 / NA | 58 | E177E (GAA→GAG) | slmA | nucleoid occlusion factor SlmA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (33/24); minor base T (0/1); total (33/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
GGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGCCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAATTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGTAATCACGCTCAACTTCCT > NC_000913/3814782‑3815266 | ggTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGAGCTAATGCTTGAACAGGATCGCCTGCTAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCATGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCCCCGATGAAACCATGCTGGCAAGCCAGATCCTGGCCTTCTGTGACGGTATGCTGTCAAGGCTTGTCGGCAGCGAGTTTAAAt > 2:349945/1‑250 (MQ=255)ggTTTTAGCGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGCAACGTTTTGTCCGCAGCGAGTTTAAAt > 2:89646/1‑250 (MQ=255) ggttaGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGcc < 2:73202/246‑1 (MQ=255) gCCTGACCCGCCTCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGAc < 2:210157/251‑1 (MQ=255) gCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGAc > 2:136684/1‑251 (MQ=255) tGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGTTCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGcc > 2:37471/1‑251 (MQ=255) gACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGccc > 1:60905/1‑251 (MQ=255) ccGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCt < 1:131724/251‑1 (MQ=255) atCACTGGGCATGCTCTCATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACAAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGTGTGAAGGTTACACCACCCATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATGTTGACGCTCGCTgggctct < 2:8480/250‑6 (MQ=255) aTGCGCTAAGGTGTGAACAGGAGCGCCTGCAAGGGCGCACCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGca < 1:192907/251‑1 (MQ=255) gcgcTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAACCCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGcat < 2:129774/250‑2 (MQ=255) tttGAACAGGATAGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGCAAAGAGACTGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGt > 2:438994/1‑250 (MQ=255) aCAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGGGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATg < 2:141238/251‑1 (MQ=255) aGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGAc < 1:237028/251‑1 (MQ=255) gATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGACACCCTGCTGGCAAGCCAGATCATGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCAGACGGATGATTTTGACGCCCGCTGGCCGCTACTTGCGGCA‑C‑AGTTGCAGTAATATGACGc > 1:167443/1‑251 (MQ=255) aTCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGcc < 1:136684/251‑1 (MQ=255) cGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGGAGGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGAGTTTGTCGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCg < 1:438583/250‑1 (MQ=255) tgcaaggcgacattaaacAGCTGGTCGTGCGAATTGAAGCGCAGCAGCGTCAGCGACTGCGTGCTAAGAGAATGCGTGAGGGAGAAGGTTAAACCACCGATGAAAACCTGCTGGCAAGCCAGATCATGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATCCCGCCCGACGGGTGATTTTAACGCCAGCGGGCCGCTAATTGCGGCA‑C‑AGTTGCAGGAATCTGACGACGGATg > 2:258773/18‑250 (MQ=255) aaGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACtt > 2:342714/1‑251 (MQ=255) gcgcATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTc > 1:324606/1‑250 (MQ=255) gcATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTCAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGCTGCAGTAATATGACGCCGGATGACTTTTCATc > 2:173224/1‑251 (MQ=255) cAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGc > 2:343719/1‑251 (MQ=255) aGCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGtt < 1:199840/251‑1 (MQ=255) gCTGTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGttt < 1:28531/251‑1 (MQ=255) gTTCGAGCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCtt > 1:104468/1‑251 (MQ=255) gCGTATTGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGTGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACg < 2:110170/251‑1 (MQ=255) cGTATTGAAGCACAGCTGCGTCAGCAATTGCGTAAAAAGAGAATGCGTGAGGGCGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGTCATTCTGTGAAGGTCTGCTGTCCCGTTTTGTCCGCAGCGAGTTTAAATACCGCACGACGGATGATTTTGACGCCGGCTGGCCGCTAATT‑CAGCAAC‑AGTTACGGTATTATGACGCCGGCTGACTTTACATCCGGCGAGATTCTTTAAACGc > 2:309218/1‑251 (MQ=255) ttGAAGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCaa > 1:149585/1‑250 (MQ=255) gAAGCGCAGCTGCGTCAGGTATTGCGTGAGAAGAGTATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGAGCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTAGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCAGGCGAGTTTCTTTAACCGCCAAAcc > 2:359182/1‑250 (MQ=255) aaGCGCAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAActc > 1:117114/1‑251 (MQ=255) aaGCGCAGCAGCGTCAGGTATTGCGTGAAAAGAGCATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCAGGCGCGTTTCTTTAAACGCCAAActc > 1:82002/1‑251 (MQ=255) gcgcAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCtt < 2:93076/251‑1 (MQ=255) gcAGCTGCGTCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTcg > 1:341093/1‑251 (MQ=255) gtcAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTa > 2:119399/3‑126 (MQ=255) gtcAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTa < 1:119399/124‑1 (MQ=255) taaGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGCGTTTCTTTAAACGCCAAACTCTTCGCGATAGGcc > 2:44011/3‑251 (MQ=255) aTTGCGTGTAACGAGCATGAGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGACGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCC‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCAGGCGAGTTTCTTTAACCGCCAAACTCTTCGCGATAGGCCTTAAcc > 2:361218/1‑251 (MQ=255) aaaGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGa < 1:148000/251‑1 (MQ=255) gagaATGCGTGAGGGTGAAGGTTACACCACCAATGAAACCCTGCAGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGcc < 1:436601/144‑1 (MQ=255) gagaATGCGTGAGGGTGAAGGGTACACCACCGATGAAACACTGCTGGAAAGCCAGAGCCTGGCCTTCTGTGCAGGTATGCTGTCACGTTTTGACCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGcc > 2:436601/1‑144 (MQ=255) aTGCGCGAGGGAGAAGGTTACACAACCGATGAAACCCTACTGGCAAGCCAGATCCTGGCCTTCTGTGACGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGCTTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTACTATGACGCCGGATGACTTTTCATCCGGCGGGTTTCTTTAAACGCCACACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCg > 2:278269/1‑251 (MQ=255) ggTGAAGGTTACACCACCGATGAAACCCTGCTGGCACGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCg > 2:107006/1‑251 (MQ=255) gAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCt > 2:329448/1‑251 (MQ=255) gccccacgGATGAAACCCGTCTGGCAAGCCAGATTTTGGCCTGCTGTGAAGGTATGCTGAAACGTTTTGTCCGCAGCGAGTTTAAAGACCGCCCGACGGATGTTTTGGACGCCCGCTGGCCGTGAATTGCGGAA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCAGCCGGCGAGTTTCTTTAAACGCCAATCATTTCGCGATGGGCCTTAACCGCCGCCACATGTTCCGCCATTTCCGGCTTCTCtt < 1:243065/247‑1 (MQ=255) cctccaccGATGAAACCCTGCTGGCAAGTCATATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCACCGATTTTAAATACCGCCCGACGGATGATTTTGACGCCCGTTGGTCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATTACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGTGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTc < 1:390118/248‑1 (MQ=255) tgctgGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCAt > 2:58841/1‑151 (MQ=255) tgctgGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCAt < 1:58841/151‑1 (MQ=255) aGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGACAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGtgat > 1:217460/1‑251 (MQ=255) gATCCTTGCCTCCTGTGGAGTTATGGTGGCACGTTGTGTCCGCAGCGAGTGTAAATCCCGCCCGACGGATGATTTTGACCCCCGCTAGCCCCTAATTCGGGCA‑CCAGT‑GCAGTAAAATAACGCCGGATGCCTTTTCACCCGGCGAGTCTCGTTAAGCTCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTGCCGTCATTTCCGGCTTCTCCACCAGCTAAGCAACCAGGTGTTTCAGGGtgatg < 2:25448/251‑1 (MQ=255) ggtcTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATCCCGCCCGACGGATGATTTTGCCGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCATTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATagag < 2:241204/248‑1 (MQ=255) ttCTGTGAAGGTATGATGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTCCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATc > 2:36393/1‑250 (MQ=255) gAAGGTATGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGc > 1:223301/1‑251 (MQ=255) atgcgggctcGTTTTGCCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAAGTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACGCTTCTCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGt < 1:438994/242‑1 (MQ=255) aTGCTGTCACGTTTTGTCCGCAGCGAGTTTAAATACCGCCCGAGGGATGATTTTGACGCCCGCTGGCCGCTGATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAACCTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGt < 2:256655/251‑1 (MQ=255) tttGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGTAATCACGCTCa > 2:136077/1‑250 (MQ=255) tGTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGCGCTGATAGAGATCACTTTGCAGTTGTAATCACGCTCAACt > 2:9660/1‑251 (MQ=255) gTCCGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCCGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGTAATCACGCTCAACtt > 1:408637/1‑251 (MQ=255) cGCAGCGAGTTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGTAATCACGCTCAACTTCCt < 1:343719/251‑1 (MQ=255) | GGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGCCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAATTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCA‑C‑AGTTGCAGTAATATGACGCCGGATGACTTTTCATCCGGCGAGTTTCTTTAAACGCCAAACTCTTCGCGATAGGCCTTAACCGCCGCCAGATGTTCCGCCATTTCCGGCTTCTCTTCCAGGTAAGCAATCAGGTCTTTCAGGGTGATGATAGAGATCACTTTGCAGTTGTAATCACGCTCAACTTCCT > NC_000913/3814782‑3815266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |