mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 70,659 | G→A | W91* (TGG→TGA) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 83,882 | G→A | intergenic (‑174/‑486) | leuL ← / → leuO | leu operon leader peptide/DNA‑binding transcriptional dual regulator LeuO |
| RA | 100,946 | T→C | M61T (ATG→ACG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 244,775 | G→A | G150D (GGC→GAC) | yafJ → | putative glutamine amidotransferase YafJ |
| RA | 245,662 | G→A | I48I (ATC→ATT) | dpaA ← | peptidoglycan meso‑diaminopimelic acid protein amidase A |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| RA | 248,203 | G→A | intergenic (+69/‑2695) | rayT → / → dinB | REP‑associated tyrosine transposase/DNA polymerase IV |
| RA | 250,009 | G→A | intergenic (+1875/‑889) | rayT → / → dinB | REP‑associated tyrosine transposase/DNA polymerase IV |
| RA | 251,629 | C→T | G244G (GGC→GGT) | dinB → | DNA polymerase IV |
| MC JC | 256,108 | Δ115,274 bp | [gpt]–[mhpC] | 117 genes [gpt], frsA, crl, insB9, insA9, crl, phoE, proB, proA, thrW, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, yafZ, ykfA, perR, insN, insI1, insN, eyeA, ykfC, insH1, mmuP, mmuM, afuC, insB2, insA2, yagB, yagA, yagE, yagF, yagG, yagH, xynR, argF, argL, ykgS, insB3, insA3, yagJ, yagK, yagL, yagM, ykgV, yagN, intF, yagP, paoD, paoC, paoB, paoA, yagU, ykgJ, ecpE, ecpD, ecpC, ecpB, ecpA, matA, ykgL, ykgO, ykgM, ykgR, insE1, insF1, rclC, rclB, rclA, rclR, ykgE, ykgF, ykgG, ykgH, betA, betB, betI, betT, yahV, pdeL, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, [mhpC] |
|
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| JC JC | 607,765 | IS150 (+) +3 bp | noncoding (26‑28/60 nt) | sokE ← | small RNA SokE |
| RA | 696,470 | C→T | noncoding (35/75 nt) | glnX ← | tRNA‑Gln |
| RA | 809,217 | 2 bp→AG | coding (40‑41/1290 nt) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 968,837 | G→A | D158N (GAT→AAT) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | 1,016,006 | G→A | I155I (ATC→ATT) | fabA ← | beta‑hydroxyacyl‑acyl carrier protein dehydratase/isomerase |
| JC JC | 1,051,342 | IS5 (+) +4 bp | intergenic (‑167/‑116) | cspH ← / → cspG | CspA family protein CspH/cold shock protein CspG |
| RA | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| RA | 1,069,743 | C→T | A33T (GCA→ACA) | rutG ← | pyrimidine:H(+) symporter |
| RA | 1,093,346 | (T)6→5 | coding (471/1359 nt) | dgcT → | putative diguanylate cyclase DgcT |
| RA | 1,098,620 | T→A | V245V (GTT→GTA) | ghrA → | glyoxylate/hydroxypyruvate reductase A |
| RA | 1,111,727 | 2 bp→TT | coding (865‑866/2544 nt) | opgH → | osmoregulated periplasmic glucans biosynthesis protein H |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,277 | C→T | N385N (AAC→AAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,280 | G→C | A386A (GCG→GCC) | icd → | isocitrate dehydrogenase |
| RA | 1,196,283 | A→G | K387K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,292 | C→T | T390T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,304 | G→A | E394E (GAG→GAA) | icd → | isocitrate dehydrogenase |
| RA | 1,196,316 | T→A | D398E (GAT→GAA) | icd → | isocitrate dehydrogenase |
| RA | 1,196,325 | A→G | K401K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| JC JC | 1,291,105 | IS1 (–) +9 bp | coding (864‑872/1014 nt) | rssB → | regulator of RpoS |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,357,202 | C→T | intergenic (‑92/+221) | sapA ← / ← ymjA | putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,398,925 | C→T | G201D (GGT→GAT) | fnr ← | DNA‑binding transcriptional dual regulator FNR |
| MC JC | 1,411,925 | Δ23,060 bp | [ttcA]–ynaM | 34 genes [ttcA], intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM |
|
| MC JC | 1,506,416 | Δ45 bp | coding (245‑289/537 nt) | sutR → | DNA‑binding transcriptional dual regulator SutR |
| RA | 1,539,947 | C→G | A882P (GCG→CCG) | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,680,548 | C→T | S331F (TCC→TTC) | ydgI → | putative arginine:ornithine antiporter |
| RA | 1,728,754 | C→T | A136A (GCC→GCT) | rnt → | ribonuclease T |
| RA | 1,829,887 | G→A | A293A (GCC→GCT) | astA ← | arginine N‑succinyltransferase |
| RA | 1,855,402 | C→T | A190A (GCG→GCA) | ydjG ← | NADH‑dependent methylglyoxal reductase |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| MC JC | 1,978,503 | Δ776 bp | insB5–insA5 | insB5, insA5 | |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,042,171 | G→A | intergenic (+146/‑197) | zinT → / → yodB | metal‑binding protein ZinT/putative cytochrome b561 YodB |
| RA | 2,044,642 | T→C | intergenic (+18/‑296) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| RA | 2,111,259 | Δ1 bp | coding (718/900 nt) | rfbD ← | dTDP‑4‑dehydrorhamnose reductase |
| RA | 2,325,037 | C→T | P94P (CCC→CCT) | atoE → | short chain fatty acid transporter |
| RA | 2,339,161 | T→C | D87G (GAC→GGC) | gyrA ← | DNA gyrase subunit A |
| JC JC | 2,468,298 | IS3 (+) +3 bp | coding (85‑87/921 nt) | yfdH → | bactoprenol glucosyl transferase |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| RA | 2,744,030 | T→C | Y136H (TAT→CAT) | yfiB → | lipoprotein YfiB |
| JC JC | 2,819,278 | IS5 (+) +4 bp | intergenic (‑132/+100) | csrA ← / ← alaS | carbon storage regulator/alanine‑‑tRNA ligase/DNA‑binding transcriptional repressor |
| RA | 2,866,609 | C→A | E315* (GAA→TAA) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,867,454 | 2 bp→AA | coding (97‑98/993 nt) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,939,297 | G→T | G137V (GGG→GTG) | fucU → | L‑fucose mutarotase |
| RA | 3,131,139 | T→A | L309Q (CTG→CAG) | insH9 → | IS5 family transposase and trans‑activator |
| RA | 3,152,494 | G→T | A87S (GCG→TCG) | metC → | cystathionine beta‑lyase/L‑cysteine desulfhydrase/alanine racemase |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,258,484 | T→C | Q389R (CAA→CGA) | tdcG ← | L‑serine deaminase III |
| RA | 3,329,743 | G→T | D261Y (GAT→TAT) | dacB → | peptidoglycan DD‑endopeptidase DacB |
| JC JC | 3,350,556 | IS1 (–) +8 bp | intergenic (‑97/‑14) | elbB ← / → arcZ | low activity glyoxalase ElbB/small regulatory RNA ArcZ |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,436,697 | G→A | E60E (GAG→GAA) | trkA → | NAD‑binding component of Trk potassium transporters |
| RA | 3,444,905 | C→T | G109S (GGT→AGT) | rpsE ← | 30S ribosomal subunit protein S5 |
| RA | 3,465,502 | G→A | E141K (GAG→AAG) | gspM → | Type II secretion system protein GspM |
| RA | 3,474,424 | T→G | K43N (AAA→AAC) | rpsL ← | 30S ribosomal subunit protein S12 |
| MC JC | 3,485,658 | Δ5,170 bp | [yhfA]–[pabA] | [yhfA], crp, yhfK, argD, yrfJ, [pabA] | |
| RA | 3,511,362 | C→T | G21S (GGC→AGC) | yhfY ← | PRD domain‑containing protein YhfY |
| RA | 3,560,443 | C→G | intergenic (+577/+179) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| MC JC | 3,653,231 | Δ10,571 bp | IS5‑mediated | yhiS–mdtF | yhiS, slp, dctR, yhiD, hdeB, hdeA, hdeD, arrS, gadE, gadF, mdtE, mdtF |
| RA | 3,707,878 | A→G | intergenic (‑173/+738) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,707,883 | G→A | intergenic (‑178/+733) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,815,264 | C→T | E169K (GAA→AAA) | pyrE ← | orotate phosphoribosyltransferase |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| JC JC | 3,888,869 | IS1 (+) +9 bp | coding (140‑148/1416 nt) | tnaA → | tryptophanase |
| RA | 3,979,080 | C→T | R160R (CGC→CGT) | wzyE → | enterobacterial common antigen polymerase |
| RA | 3,979,723 | C→T | P375S (CCT→TCT) | wzyE → | enterobacterial common antigen polymerase |
| RA | 4,043,852 | G→A | W145* (TGG→TGA) | dsbA → | thiol:disulfide oxidoreductase DsbA |
| RA | 4,043,901 | G→A | A162T (GCT→ACT) | dsbA → | thiol:disulfide oxidoreductase DsbA |
| RA | 4,046,594 | G→A | N3N (AAC→AAT) | yihG ← | 1‑acylglycerol‑3‑phosphate O‑acyltransferase YihG |
| RA | 4,047,415 | G→A | T150T (ACG→ACA) | polA → | DNA polymerase I |
| RA | 4,051,809 | G→A | E155K (GAA→AAA) | yihI → | Der GTPase‑activating protein YihI |
| RA | 4,054,219 | G→A | P354S (CCA→TCA) | glnG ← | DNA‑binding transcriptional dual regulator NtrC |
| RA | 4,061,021 | G→A | S192N (AGC→AAC) | yihL → | putative DNA‑binding transcriptional regulator YihL |
| RA | 4,065,117 | G→A | T217M (ACG→ATG) | yihO ← | putative sulfoquinovose transporter |
| RA | 4,073,952 | G→A | A72T (GCA→ACA) | yihV → | 6‑deoxy‑6‑sulfofructose kinase |
| RA | 4,080,078 | G→A | intergenic (+109/+221) | yiiF → / ← fdhE | protein YiiF/formate dehydrogenase formation protein |
| RA | 4,097,875 | T→C | I47T (ATT→ACT) | rhaS → | DNA‑binding transcriptional activator RhaS |
| RA | 4,098,150 | G→A | D139N (GAT→AAT) | rhaS → | DNA‑binding transcriptional activator RhaS |
| RA | 4,100,227 | G→A | S100L (TCG→TTG) | rhaT ← | rhamnose/lyxose:H(+) symporter |
| RA | 4,101,785 | G→A | A32A (GCG→GCA) | kdgT → | 2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter |
| RA | 4,105,917 | G→A | G33D (GGT→GAT) | cpxP → | periplasmic protein CpxP |
| RA | 4,117,807 | G→A | A95V (GCC→GTC) | glpF ← | glycerol facilitator |
| RA | 4,122,023 | G→A | L89L (CTG→TTG) | hslV ← | peptidase component of the HslVU protease |
| RA | 4,123,470 | G→T | C329* (TGC→TGA) | cytR ← | DNA‑binding transcriptional repressor CytR |
| RA | 4,124,375 | G→A | R28* (CGA→TGA) | cytR ← | DNA‑binding transcriptional repressor CytR |
| RA | 4,128,813 | Δ2 bp | coding (142‑143/1161 nt) | metB → | O‑succinylhomoserine(thiol)‑lyase/O‑ succinylhomoserine lyase |
| RA | 4,137,772 | G→A | intergenic (‑115/+160) | yijF ← / ← gldA | DUF1287 domain‑containing protein YijF/L‑1,2‑propanediol dehydrogenase/glycerol dehydrogenase |
| RA | 4,153,441 | G→A | intergenic (‑343/+255) | ppc ← / ← argE | phosphoenolpyruvate carboxylase/acetylornithine deacetylase |
| RA | 4,154,691 | G→A | Q53* (CAG→TAG) | argE ← | acetylornithine deacetylase |
| RA | 4,182,782 | A→T | Q513L (CAG→CTG) | rpoB → | RNA polymerase subunit beta |
| RA | 4,189,636 | G→A | intergenic (+63/‑150) | rpoC → / → yjaZ | RNA polymerase subunit beta'/protein YjaZ |
| RA | 4,192,667 | G→A | I57I (ATC→ATT) | thiS ← | sulfur carrier protein ThiS |
| RA | 4,204,555 | G→A | A412A (GCG→GCA) | zraR → | DNA‑binding transcriptional activator ZraR |
| RA | 4,212,973 | Δ1 bp | intergenic (+27/‑67) | rrlE → / → rrfE | 23S ribosomal RNA/5S ribosomal RNA |
| RA | 4,220,685 | A→G | F601F (TTT→TTC) | arpA ← | regulator of acetyl CoA synthetase |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,264,192 | C→T | E14K (GAA→AAA) | qorA ← | putative quinone oxidoreductase 1 |
| RA | 4,287,464 | T→A | intergenic (‑93/‑147) | acs ← / → ytcB | acetyl‑CoA synthetase (AMP‑forming)/protein YtcB |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,405,043 | G→A | E119E (GAG→GAA) | purA → | adenylosuccinate synthetase |
| RA | 4,415,505 | C→T | L411L (CTG→TTG) | aidB → | putative acyl‑CoA dehydrogenase AidB |
| RA | 4,418,060 | C→T | D132N (GAT→AAT) | ulaR ← | DNA‑binding transcriptional repressor UlaR |
| RA | 4,423,110 | G→A | D89N (GAC→AAC) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| RA | 4,444,187 | G→A | V26M (GTG→ATG) | tamB → | translocation and assembly module subunit TamB |
| RA | 4,455,812 | G→A | G10S (GGC→AGC) | mpl → | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase |
| RA | 4,457,427 | G→A | Q147* (CAA→TAA) | yjgA ← | putative ribosome biogenesis factor YjgA |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,532,409 | T→G | intergenic (‑758/+28) | sgcX ← / ← yjhP | putative endoglucanase with Zn‑dependent exopeptidase domain/putative methyltransferase YjhP |
| JC JC | 4,542,250 | IS1 (+) +9 bp | coding (214‑222/597 nt) | fimE → | regulator for fimA |
| RA | 4,546,601 | C→T | I502I (ATC→ATT) | fimD → | type I fimbriae usher protein |
| RA | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| RA | 4,638,240 | G→A | L21L (TTG→TTA) | creD → | putative inner membrane protein CreD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196352 | 1211461 | 15110 | 7 [5] | [6] 7 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 1292514 | 1292677 | 164 | 7 [5] | [6] 7 | hns | DNA‑binding transcriptional dual regulator H‑NS |
| * | * | ÷ | NC_000913 | 2172548 | 2175524 | 2977 | 33 [0] | [0] 37 | [gatD]–[gatZ] | [gatD],gatB,gatA,[gatZ] |
| * | * | ÷ | NC_000913 | 4035390–4035733 | 4036886–4035736 | 4–1497 | 7 [6] | [5] 7 | [rrsA] | [rrsA] |
| * | * | ÷ | NC_000913 | 4088916 | 4088995 | 80 | 7 [6] | [6] 7 | frvR | putative DNA‑binding transcriptional regulator FrvR |
| * | * | ÷ | NC_000913 | 4166485–4168220 | 4168509 | 290–2025 | 7 [6] | [6] 8 | rrsB–gltT | rrsB,gltT |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 20 (0.540) | 20/482 | 0.9 | 100% | intergenic (+253/‑69) | ychE/insH21 | MarC family putative inner membrane protein YchE/IS5 family transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 37 (0.980) | 34/490 | 0.2 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2175525 = | 0 (0.000) | coding (797/1263 nt) | gatZ | putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 32 (0.850) | 29/490 | 0.4 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2172547 | 0 (0.000) | coding (327/1041 nt) | gatD | galactitol‑1‑phosphate 5‑dehydrogenase | |||||
| * | ? | NC_000913 | 2818197 = | 32 (0.850) | 17 (0.660) | 16/332 | 0.6 | 46.1% | intergenic (‑62/+1) | argZ/argY | tRNA‑Arg/tRNA‑Arg |
| ? | NC_000913 | = 2818471 | 18 (0.700) | intergenic (‑197/+2) | argY/argV | tRNA‑Arg/tRNA‑Arg | |||||
| * | ? | NC_000913 | 3013860 = | 9 (0.240) | 28 (0.750) | 27/486 | 0.4 | 75.7% | coding (380/1626 nt) | yqeB | XdhC‑CoxI family protein YqeB |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 3013862 | 9 (0.240) | 31 (0.820) | 30/488 | 0.3 | 77.6% | coding (378/1626 nt) | yqeB | XdhC‑CoxI family protein YqeB |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 4542682 = | 9 (0.240) | 13 (0.360) | 13/472 | 1.6 | 59.5% | intergenic (+49/‑433) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | 4542996 = | 9 (0.250) | intergenic (+363/‑119) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||
| * | ? | NC_000913 | = 4542690 | 8 (0.210) | 7 (0.190) | 7/472 | 2.7 | 45.6% | intergenic (+57/‑425) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | = 4542986 | 9 (0.250) | intergenic (+353/‑129) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||