mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 5,666 | C→T | intergenic (+136/+17) | yaaX → / ← yaaA | DUF2502 domain‑containing protein YaaX/DNA binding and peroxide stress response protein YaaA |
| RA | 44,202 | C→T | A8V (GCC→GTC) | fixC → | putative oxidoreductase FixC |
| RA | 46,673 | C→T | S289S (AGC→AGT) | yaaU → | putative transporter YaaU |
| JC JC | 59,123 | IS150 (+) +3 bp | coding (3‑5/159 nt) | yabQ → | protein YabQ |
| RA | 92,790 | C→T | P460S (CCG→TCG) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 143,021 | A→G | G81G (GGA→GGG) | yadG → | putative ABC transporter ATP‑binding protein YadG |
| JC JC | 214,173 | IS2 (–) +5 bp | intergenic (‑48/‑114) | yaeP ← / → yaeQ | PF06786 family protein YaeP/uncharacterized protein YaeQ |
| RA | 238,884 | G→A | intergenic (‑148/+535) | ykfM ← / ← yafV | uncharacterized protein YkfM/2‑oxoglutaramate amidase |
| RA | 239,930 | G→A | S87F (TCT→TTT) | yafV ← | 2‑oxoglutaramate amidase |
| RA | 243,084 | G→A | R74C (CGC→TGC) | fadE ← | acyl‑CoA dehydrogenase |
| RA | 245,766 | G→A | P14S (CCG→TCG) | dpaA ← | peptidoglycan meso‑diaminopimelic acid protein amidase A |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| RA | 251,604 | G→A | S236N (AGC→AAC) | dinB → | DNA polymerase IV |
| RA | 252,349 | G→A | E17K (GAA→AAA) | yafO → | ribosome‑dependent mRNA interferase toxin YafO |
| RA | 253,835 | G→A | intergenic (+674/+424) | yafP → / ← pepD | putative N‑acetyltransferase YafP/peptidase D |
| RA | 266,523 | G→A | L11L (CTG→TTG) | yafY ← | inner membrane lipoprotein YafY |
| RA | 267,149 | G→A | intergenic (‑596/+35) | yafY ← / ← yafZ | inner membrane lipoprotein YafY/DUF932 domain‑containing protein YafZ |
| RA | 268,709 | G→A | R84R (CGC→CGT) | ykfA ← | putative GTP‑binding protein YkfA |
| RA | 273,167 | G→A | R107R (CGG→CGA) | ykfC → | PF00078 domain‑containing protein YkfC |
| RA | 273,450 | G→A | A202T (GCG→ACG) | ykfC → | PF00078 domain‑containing protein YkfC |
| RA | 273,734 | G→A | Q296Q (CAG→CAA) | ykfC → | PF00078 domain‑containing protein YkfC |
| RA | 274,939 | G→A | A48V (GCT→GTT) | insH1 ← | IS5 family transposase and trans‑activator |
| RA | 274,985 | G→A | P33S (CCA→TCA) | insH1 ← | IS5 family transposase and trans‑activator |
| RA | 275,668 | G→A | G115E (GGA→GAA) | mmuP → | S‑methyl‑L‑methionine transporter |
| RA | 277,277 | G→A | R188H (CGT→CAT) | mmuM → | homocysteine S‑methyltransferase |
| RA | 281,053 | T→C | T311A (ACG→GCG) | yagA ← | integrase core domain‑containing protein YagA |
| RA | 281,778 | G→A | S69F (TCC→TTC) | yagA ← | integrase core domain‑containing protein YagA |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 285,966 | G→A | G191D (GGC→GAC) | yagG → | putative D‑xylonate transporter YagG |
| RA | 287,324 | G→A | G179D (GGC→GAC) | yagH → | putative xylosidase/arabinosidase |
| RA | 287,348 | G→A | G187D (GGC→GAC) | yagH → | putative xylosidase/arabinosidase |
| RA | 287,946 | G→A | W386* (TGG→TGA) | yagH → | putative xylosidase/arabinosidase |
| RA | 288,641 | G→A | A174A (GCC→GCT) | xynR ← | DNA‑binding transcriptional repressor XynR |
| RA | 305,439 | G→A | S460F (TCC→TTC) | ecpD ← | fimbrial adhesin EcpD |
| RA | 305,990 | G→A | I276I (ATC→ATT) | ecpD ← | fimbrial adhesin EcpD |
| RA | 308,924 | G→A | R137C (CGC→TGC) | ecpC ← | putative fimbrial usher protein EcpC |
| RA | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| RA | 314,622 | G→A | intergenic (‑1380/‑669) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| RA | 316,519 | G→A | intergenic (+66/+1207) | insF1 → / ← rclC | IS3 element protein InsF/DUF417 domain‑containing inner membrane protein RclC |
| RA | 316,837 | G→A | intergenic (+384/+889) | insF1 → / ← rclC | IS3 element protein InsF/DUF417 domain‑containing inner membrane protein RclC |
| RA | 320,300 | G→A | S25N (AGT→AAT) | rclR → | DNA‑binding transcriptional activator RclR |
| RA | 328,598 | C→T | V46I (GTC→ATC) | betB ← | betaine aldehyde dehydrogenase |
| RA | 339,376 | G→A | G351E (GGG→GAG) | yahG → | DUF1116 domain‑containing protein YahG |
| RA | 339,935 | C→T | A56V (GCC→GTC) | yahH → | putative uncharacterized protein YahH |
| RA | 339,941 | C→T | T58I (ACT→ATT) | yahH → | putative uncharacterized protein YahH |
| RA | 339,958 | G→A | D64N (GAC→AAC) | yahH → | putative uncharacterized protein YahH |
| RA | 343,442 | G→A | G187R (GGA→AGA) | yahK → | aldehyde reductase, NADPH‑dependent |
| RA | 347,833 | G→A | A204V (GCC→GTC) | prpR ← | DNA‑binding transcriptional dual regulator PrpR |
| RA | 352,850 | G→A | G49S (GGC→AGC) | prpE → | propionyl‑CoA synthetase |
| RA | 353,100 | G→A | G132D (GGC→GAC) | prpE → | propionyl‑CoA synthetase |
| RA | 355,006 | G→A | G29R (GGA→AGA) | codB → | cytosine transporter |
| RA | 355,064 | G→A | S48N (AGC→AAC) | codB → | cytosine transporter |
| RA | 355,229 | G→A | G103E (GGA→GAA) | codB → | cytosine transporter |
| RA | 357,285 | G→A | G372E (GGA→GAA) | codA → | cytosine/isoguanine deaminase |
| RA | 358,368 | G→A | P108L (CCC→CTC) | cynR ← | DNA‑binding transcriptional dual regulator CynR |
| RA | 360,082 | G→A | G31R (GGA→AGA) | cynX → | cyanate transporter |
| RA | 360,536 | C→T | S182F (TCC→TTC) | cynX → | cyanate transporter |
| RA | 360,786 | G→A | M265I (ATG→ATA) | cynX → | cyanate transporter |
| RA | 361,489 | G→A | N124N (AAC→AAT) | lacA ← | galactoside O‑acetyltransferase |
| RA | 364,433 | G→A | Q625* (CAG→TAG) | lacZ ← | beta‑galactosidase |
| RA | 365,146 | G→A | A387V (GCC→GTC) | lacZ ← | beta‑galactosidase |
| RA | 365,222 | G→A | P362S (CCT→TCT) | lacZ ← | beta‑galactosidase |
| RA | 365,959 | G→A | P116L (CCC→CTC) | lacZ ← | beta‑galactosidase |
| RA | 366,121 | G→A | A62V (GCC→GTC) | lacZ ← | beta‑galactosidase |
| RA | 372,529 | G→A | V139M (GTG→ATG) | mhpD → | 2‑hydroxypentadienoate hydratase |
| RA | 373,341 | G→A | A141T (GCG→ACG) | mhpF → | acetaldehyde dehydrogenase (acetylating) MhpF |
| RA | 373,985 | C→T | R40C (CGC→TGC) | mhpE → | 4‑hydroxy‑2‑oxovalerate aldolase |
| RA | 374,227 | C→T | A120A (GCC→GCT) | mhpE → | 4‑hydroxy‑2‑oxovalerate aldolase |
| RA | 380,022 | (G)10→9 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| RA | 382,571 | G→A | E300K (GAA→AAA) | insD1 → | IS2 element protein |
| RA | 382,943 | G→A | C331C (TGC→TGT) | yaiP ← | putative glucosyltransferase |
| RA | 384,839 | G→A | intergenic (‑223/‑393) | yaiS ← / → tauA | putative deacetylase YaiS/taurine ABC transporter periplasmic binding protein |
| RA | 386,290 | G→A | E28E (GAG→GAA) | tauB → | taurine ABC transporter ATP binding subunit |
| RA | 387,624 | G→A | E218E (GAG→GAA) | tauC → | taurine ABC transporter membrane subunit |
| RA | 398,073 | G→A | G68R (GGG→AGG) | yaiW → | surface‑exposed outer membrane lipoprotein |
| RA | 398,494 | G→A | G208D (GGC→GAC) | yaiW → | surface‑exposed outer membrane lipoprotein |
| RA | 400,495 | G→A | V143V (GTC→GTT) | ddlA ← | D‑alanine‑‑D‑alanine ligase A |
| RA | 403,108 | G→A | L454L (CTG→CTA) | phoA → | alkaline phosphatase |
| RA | 431,516 | A→C | Y166* (TAT→TAG) | tsx ← | nucleoside‑specific channel‑forming protein Tsx |
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| JC JC | 480,334 | IS5 (+) +4 bp | coding (372‑375/375 nt) | tomB ← | Hha toxicity modulator TomB |
| JC JC | 552,785 | IS150 (+) +3 bp | coding (314‑316/510 nt) | purE ← | N(5)‑carboxyaminoimidazole ribonucleotide mutase |
| JC JC | 607,765 | IS150 (+) +3 bp | noncoding (26‑28/60 nt) | sokE ← | small RNA SokE |
| RA | 640,502 | C→A | L250L (CTC→CTA) | ahpF → | alkyl hydroperoxide reductase, AhpF component |
| RA | 690,948 | G→A | V279V (GTC→GTT) | ybeX ← | CorC‑HlyC family protein YbeX |
| RA | 692,073 | C→T | R90H (CGT→CAT) | ybeY ← | endoribonuclease YbeY |
| MC JC | 696,507 | Δ112 bp | glnV | glnV | |
| RA | 700,038 | G→A | H97Y (CAT→TAT) | umpH ← | UMP phosphatase |
| RA | 809,217 | 2 bp→AG | coding (40‑41/1290 nt) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 848,590 | G→A | P108S (CCG→TCG) | dps ← | DNA protection during starvation protein |
| RA | 968,837 | G→A | D158N (GAT→AAT) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | 1,018,193 | C→T | S36N (AGT→AAT) | ycbZ ← | putative ATP‑dependent protease YcbZ |
| RA | 1,022,002 | C→T | E628K (GAG→AAG) | yccS ← | putative transporter YccS |
| RA | 1,023,148 | C→T | D246N (GAT→AAT) | yccS ← | putative transporter YccS |
| RA | 1,034,465 | C→T | R404R (CGC→CGT) | hyaB → | hydrogenase 1 large subunit |
| RA | 1,035,862 | C→T | A31A (GCC→GCT) | hyaD → | putative hydrogenase 1 maturation protease HyaD |
| RA | 1,036,085 | C→T | L106L (CTG→TTG) | hyaD → | putative hydrogenase 1 maturation protease HyaD |
| RA | 1,037,810 | C→T | P24L (CCC→CTC) | appC → | cytochrome bd‑II subunit 1 |
| RA | 1,040,126 | G→T | L277L (CTG→CTT) | appB → | cytochrome bd‑II subunit 2 |
| RA | 1,043,376 | C→T | V279M (GTG→ATG) | etk ← | protein‑tyrosine kinase Etk |
| RA | 1,048,985 | C→T | L116L (CTG→CTA) | gfcB ← | lipoprotein GfcB |
| RA | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| RA | 1,070,014 | A→G | L114P (CTG→CCG) | rutF ← | FMN reductase RutF |
| RA | 1,078,641 | A→C | F81C (TTT→TGT) | putA ← | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| MC JC | 1,095,503 | Δ10,047 bp | IS3‑mediated | ycdU–[ymdA] | ycdU, serX, ghrA, ycdX, ycdY, ycdZ, csgG, csgF, csgE, csgD, csgB, csgA, csgC, [ymdA] |
| RA | 1,111,727 | 2 bp→TT | coding (865‑866/2544 nt) | opgH → | osmoregulated periplasmic glucans biosynthesis protein H |
| JC JC | 1,141,668 | IS150 (+) +3 bp | coding (2698‑2700/3186 nt) | rne ← | ribonuclease E |
| JC JC | 1,145,135 | IS3 (+) +3 bp | coding (196‑198/960 nt) | rluC → | 23S rRNA pseudouridine(955/2504/2580) synthase |
| RA | 1,150,616 | C→T | L297L (CTG→TTG) | fabD → | [acyl‑carrier‑protein] S‑malonyltransferase |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,277 | C→T | N385N (AAC→AAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,280 | G→C | A386A (GCG→GCC) | icd → | isocitrate dehydrogenase |
| RA | 1,196,283 | A→G | K387K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| JC JC | 1,232,148 | IS2 (–) +5 bp | coding (963‑967/1269 nt) | umuC → | DNA polymerase V catalytic protein |
| RA | 1,265,552 | G→A | G181S (GGT→AGT) | prfA → | peptide chain release factor RF1 |
| RA | 1,276,230 | C→T | P463P (CCG→CCA) | narX ← | sensor histidine kinase NarX |
| MC JC | 1,299,499 | Δ1,199 bp | insH21 | insH21 | |
| JC JC | 1,301,713 | IS30 (–) +2 bp | coding (532‑533/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| RA | 1,315,384 | G→A | Y129Y (TAC→TAT) | yciF ← | DUF892 domain‑containing protein YciF |
| RA | 1,317,129 | G→A | Q32* (CAG→TAG) | trpA ← | tryptophan synthase subunit alpha |
| RA | 1,322,325 | G→A | L208F (CTC→TTC) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,356,932 | G→A | T60I (ACC→ATC) | sapA ← | putative periplasmic binding protein SapA |
| RA | 1,357,202 | C→T | intergenic (‑92/+221) | sapA ← / ← ymjA | putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,362,062 | C→A | T51K (ACG→AAG) | puuR → | DNA‑binding transcriptional repressor PuuR |
| RA | 1,366,433 | G→A | G295D (GGC→GAC) | puuE → | 4‑aminobutyrate aminotransferase PuuE |
| MC JC | 1,397,239 | Δ7,448 bp | IS5‑mediated | ynaJ–abgA | ynaJ, uspE, fnr, ogt, abgT, abgB, abgA |
| JC JC | 1,477,100 | IS5 (+) +4 bp | coding (1957‑1960/2307 nt) | ydbD → | DUF2773 domain‑containing protein YdbD |
| RA | 1,487,229 | G→A | intergenic (+266/‑6) | hrpA → / → ydcF | ATP‑dependent 3'‑>5' RNA helicase HrpA/DUF218 domain‑containing protein YdcF |
| RA | 1,501,192 | C→T | P207L (CCT→CTT) | tehA → | tellurite resistance protein |
| RA | 1,506,659 | G→A | G163E (GGG→GAG) | sutR → | DNA‑binding transcriptional dual regulator SutR |
| RA | 1,530,720 | G→A | intergenic (‑216/‑1096) | yncO ← / → ydcC | protein YncO/H repeat‑associated putative transposase YdcC |
| RA | 1,542,535 | G→A | A19V (GCC→GTC) | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,547,403 | G→A | M1M (ATG→ATA) † | fdnG → | formate dehydrogenase N subunit alpha |
| RA | 1,549,651 | G→A | A751T (GCT→ACT) | fdnG → | formate dehydrogenase N subunit alpha |
| RA | 1,557,486 | G→A | L185L (CTG→TTG) | ddpF ← | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| RA | 1,563,622 | G→A | S704S (TCC→TCT) | dosP ← | oxygen‑sensing c‑di‑GMP phosphodiesterase DosP |
| RA | 1,566,073 | G→A | V356V (GTC→GTT) | dosC ← | diguanylate cyclase DosC |
| RA | 1,573,791 | G→A | A471V (GCA→GTA) | pqqL ← | periplasmic metalloprotease |
| RA | 1,582,610 | G→T | intergenic (‑86/+316) | ydeN ← / ← ydeO | putative sulfatase YdeN/DNA‑binding transcriptional dual regulator YdeO |
| JC JC | 1,590,147 | IS2 (+) +5 bp | intergenic (‑146/+703) | ydeT ← / ← hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA |
| RA | 1,596,941 | G→A | intergenic (‑4499/+1676) | hipB ← / ← lsrK | antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase |
| RA | 1,598,846 | G→A | A455V (GCC→GTC) | lsrK ← | autoinducer‑2 kinase |
| RA | 1,606,337 | G→A | E80K (GAA→AAA) | lsrF → | 3‑hydroxy‑2,4‑pentadione 5‑phosphate thiolase |
| RA | 1,607,592 | G→A | A83T (GCA→ACA) | tam → | trans‑aconitate 2‑methyltransferase |
| RA | 1,610,076 | T→G | D202A (GAT→GCT) | uxaB ← | tagaturonate reductase |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,684,231 | G→A | intergenic (+48/‑28) | rstB → / → tus | sensory histidine kinase RstB/DNA replication terminus site‑binding protein |
| RA | 1,721,136 | C→T | L38F (CTT→TTT) | ydhI → | DUF1656 domain‑containing protein YdhI |
| JC JC | 1,772,062 | IS5 (+) +4 bp | coding (992‑995/1215 nt) | ydiM → | putative exporter YdiM |
| RA | 1,776,715 | A→T | S377C (AGT→TGT) | ydiF → | putative acetate‑CoA transferase YdiF |
| RA | 1,803,487 | G→A | intergenic (‑917/‑1678) | thrS ← / → yniD | threonine‑‑tRNA ligase/uncharacterized protein YniD |
| RA | 1,817,420 | G→A | L361L (CTG→TTG) | chbF ← | monoacetylchitobiose‑6‑phosphate hydrolase |
| RA | 1,824,540 | C→T | G133D (GGC→GAC) | ves ← | HutD family protein Ves |
| JC JC | 1,844,254 | IS150 (+) +3 bp | coding (616‑618/1041 nt) | ynjI ← | DUF1266 domain‑containing protein YnjI |
| RA | 1,854,789 | G→A | V22V (GTC→GTT) | ydjF ← | putative DNA‑binding transcriptional regulator YdjF |
| RA | 1,856,844 | C→T | D29N (GAT→AAT) | ydjH ← | L‑glycero‑L‑galacto‑octuluronate kinase |
| JC | 1,867,696 | Δ7 bp | coding (789‑795/1935 nt) | yeaG → | protein kinase YeaG |
| RA | 1,892,332 | G→A | P302S (CCG→TCG) | yoaA ← | putative ATP‑dependent 5' to 3' DNA helicase |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,899,122 | G→A | G232G (GGG→GGA) | pdeD → | putative c‑di‑GMP phosphodiesterase PdeD |
| RA | 1,902,255 | G→A | G70R (GGA→AGA) | manX → | mannose‑specific PTS enzyme IIAB component |
| RA | 1,907,092 | G→A | intergenic (‑32/+134) | rlmA ← / ← cspC | 23S rRNA m(1)G745 methyltransferase/transcription antiterminator and regulator of mRNA stability CspC |
| JC JC | 1,907,451 | IS2 (+) +5 bp | coding (137‑141/144 nt) | yobF ← | DUF2527 domain‑containing protein YobF |
| RA | 1,919,413 | G→A | G635E (GGG→GAG) | letB → | lipophilic envelope spanning tunnel |
| RA | 1,926,726 | G→A | D203N (GAC→AAC) | exoX → | exonuclease X |
| RA | 1,942,638 | G→A | intergenic (‑55/‑24) | znuA ← / → znuC | Zn(2(+)) ABC transporter periplasmic binding protein/Zn(2(+)) ABC transporter ATP binding subunit |
| RA | 1,958,858 | G→A | L137F (CTT→TTT) | cutC ← | PF03932 family protein CutC |
| RA | 1,980,754 | G→A | H287Y (CAT→TAT) | otsA ← | trehalose‑6‑phosphate synthase |
| RA | 1,987,499 | C→A | intergenic (+71/+8) | ftnB → / ← yecJ | putative ferritin‑like protein/DUF2766 domain‑containing protein YecJ |
| RA | 1,993,134 | G→A | P525S (CCC→TCC) | uvrC ← | UvrABC excision nuclease subunit C |
| RA | 2,001,282 | G→A | L170L (CTA→TTA) | fliA ← | RNA polymerase sigma factor FliA |
| RA | 2,007,206 | G→A | A351T (GCG→ACG) | amyA → | alpha‑amylase |
| RA | 2,014,838 | G→A | R537H (CGC→CAC) | fliF → | flagellar basal‑body MS‑ring and collar protein |
| RA | 2,029,111 | G→A | P86S (CCG→TCG) | yedI ← | DUF808 domain‑containing inner membrane protein YedI |
| RA | 2,029,147 | G→A | L74L (CTG→TTG) | yedI ← | DUF808 domain‑containing inner membrane protein YedI |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,105,022 | G→A | V21V (GTC→GTT) | wbbJ ← | putative lipopolysaccharide biosynthesis O‑acetyl transferase WbbJ |
| RA | 2,109,858 | G→A | S94F (TCC→TTC) | rfbC ← | dTDP‑4‑dehydrorhamnose 3,5‑epimerase |
| RA | 2,134,777 | G→A | A292A (GCC→GCT) | wzc ← | protein‑tyrosine kinase Wzc |
| RA | 2,136,412 | G→A | L278L (CTG→TTG) | wza ← | outer membrane polysaccharide export protein Wza |
| RA | 2,139,657 | G→A | intergenic (+172/+102) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,164,376 | G→A | S34N (AGC→AAC) | baeR → | DNA‑binding transcriptional activator BaeR |
| RA | 2,175,290 | G→A | S344S (AGC→AGT) | gatZ ← | putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone |
| RA | 2,182,956 | G→A | R232R (CGC→CGT) | yegX ← | putative glycosyl hydrolase YegX |
| RA | 2,184,992 | C→T | G104S (GGT→AGT) | thiM ← | hydroxyethylthiazole kinase |
| RA | 2,188,087 | T→C | T110A (ACG→GCG) | yehA ← | putative fimbrial adhesin YehA |
| RA | 2,195,035 | G→A | A246T (GCG→ACG) | metG → | methionine‑‑tRNA ligase |
| RA | 2,280,101 | C→T | C128Y (TGC→TAC) | rsuA ← | 16S rRNA pseudouridine(516) synthase |
| RA | 2,285,197 | C→T | R274R (CGC→CGT) | lapC → | lipopolysaccharide signal transducer LapC |
| RA | 2,297,690 | C→T | L190L (CTG→CTA) | napC ← | periplasmic nitrate reductase cytochrome c protein |
| JC JC | 2,324,384 | IS150 (+) +3 bp | coding (276‑278/651 nt) | atoA → | acetyl‑CoA:acetoacetyl‑CoA transferase subunit beta |
| RA | 2,384,808 | C→T | K305K (AAG→AAA) | yfbK ← | IPR002035/DUF3520 domain‑containing protein YfbK |
| RA | 2,410,419 | G→A | L312L (CTG→TTG) | yfbS ← | putative transporter YfbS |
| RA | 2,444,493 | C→T | D87N (GAT→AAT) | epmC ← | EF‑P‑Lys34 hydroxylase |
| RA | 2,476,547 | C→T | intergenic (+37/+147) | torI → / ← dsdC | prophage CPS‑53 recombination directionality factor and response regulator inhibitor/DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,482,255 | G→A | T362I (ACC→ATC) | emrK ← | tripartite efflux pump membrane fusion protein EmrK |
| RA | 2,484,827 | C→T | L152F (CTT→TTT) | evgS → | sensor histidine kinase EvgS |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,572,542 | G→A | P322S (CCG→TCG) | eutD ← | phosphate acetyltransferase EutD |
| RA | 2,582,490 | C→T | L96L (TTG→TTA) | ypfG ← | DUF1176 domain‑containing protein YpfG |
| RA | 2,623,776 | G→A | E245K (GAG→AAG) | ppk → | polyphosphate kinase |
| RA | 2,730,889 | G→A | noncoding (269/1542 nt) | rrsG ← | 16S ribosomal RNA |
| JC JC | 2,739,490 | IS150 (+) +3 bp | coding (578‑580/1122 nt) | tyrA ← | fused chorismate mutase/prephenate dehydrogenase |
| RA | 2,747,449 | C→T | S116N (AGC→AAC) | ffh ← | signal recognition particle protein component |
| RA | 2,774,947 | G→A | G544S (GGT→AGT) | yfjW → | uncharacterized protein YfjW |
| JC JC | 2,913,392 | IS2 (–) +5 bp | coding (256‑260/2235 nt) | relA ← | GDP/GTP pyrophosphokinase |
| RA | 2,926,292 | C→T | intergenic (+96/‑16) | queF → / → ppnN | 7‑cyano‑7‑deazaguanine reductase/nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,933,793 | G→A | intergenic (‑105/‑442) | fucA ← / → fucP | L‑fuculose‑phosphate aldolase/L‑fucose:H(+) symporter |
| RA | 2,937,348 | T→C | Y589H (TAC→CAC) | fucI → | L‑fucose isomerase |
| RA | 2,938,770 | T→C | F435L (TTC→CTC) | fucK → | L‑fuculokinase |
| RA | 2,941,835 | G→A | Q245* (CAA→TAA) | gcvA ← | DNA‑binding transcriptional dual regulator GcvA |
| RA | 2,990,760 | G→A | intergenic (‑400/‑508) | yqeK ← / → ygeG | protein YqeK/TPR repeat‑containing putative chaperone YgeG |
| RA | 2,991,238 | G→T | intergenic (‑878/‑30) | yqeK ← / → ygeG | protein YqeK/TPR repeat‑containing putative chaperone YgeG |
| JC JC | 3,013,819 | IS150 (+) +3 bp | coding (419‑421/1626 nt) | yqeB ← | XdhC‑CoxI family protein YqeB |
| RA | 3,088,010 | 2 bp→TT | intergenic (+150/‑273) | metK → / → galP | methionine adenosyltransferase/galactose:H(+) symporter |
| RA | 3,103,765 | G→A | P251P (CCG→CCA) | mutY → | adenine DNA glycosylase |
| RA | 3,108,369 | C→T | D263N (GAC→AAC) | speC ← | constitutive ornithine decarboxylase |
| RA | 3,110,945 | C→T | S61N (AGC→AAC) | yghD ← | putative type II secretion system M‑type protein YghD |
| RA | 3,111,094 | C→T | Q11Q (CAG→CAA) | yghD ← | putative type II secretion system M‑type protein YghD |
| RA | 3,112,212 | G→A | Q280* (CAG→TAG) | yghF ← | putative type II secretion system C‑type protein YghF |
| RA | 3,113,320 | C→T | G53E (GGA→GAA) | yghG ← | lipoprotein YghG |
| RA | 3,114,408 | C→T | intergenic (‑56/+142) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,115,217 | C→T | W1299* (TGG→TAG) | yghJ ← | putative lipoprotein YghJ |
| RA | 3,115,379 | C→T | G1245D (GGT→GAT) | yghJ ← | putative lipoprotein YghJ |
| RA | 3,121,292 | C→T | intergenic (‑13/+342) | glcA ← / ← glcB | glycolate/lactate:H(+) symporter GlcA/malate synthase G |
| RA | 3,121,816 | C→T | A664T (GCG→ACG) | glcB ← | malate synthase G |
| RA | 3,124,703 | C→T | A253T (GCG→ACG) | glcF ← | glycolate dehydrogenase, putative iron‑sulfur subunit |
| MC JC | 3,131,341 | Δ18,049 bp | IS5‑mediated | [yghQ]–[yqhA] | 19 genes [yghQ], yghR, yghS, yghT, pitB, gss, yghU, hybG, hybF, hybE, hybD, hybC, hybB, hybA, hybO, yghW, yqhI, gpr, [yqhA] |
| RA | 3,157,803 | G→A | A52T (GCG→ACG) | yqhG → | DUF3828 domain‑containing protein YqhG |
| RA | 3,163,470 | G→A | I4I (ATC→ATT) | plsC ← | 1‑acylglycerol‑3‑phosphate O‑acyltransferase PlsC |
| RA | 3,166,108 | G→A | intergenic (‑135/+3) | parC ← / ← ygiS | DNA topoisomerase IV subunit A/putative deoxycholate binding periplasmic protein |
| RA | 3,166,913 | G→A | A269V (GCG→GTG) | ygiS ← | putative deoxycholate binding periplasmic protein |
| RA | 3,167,825 | G→A | intergenic (‑107/+26) | ygiS ← / ← mqsA | putative deoxycholate binding periplasmic protein/antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA |
| RA | 3,168,872 | G→A | R120R (CGC→CGT) | ygiV ← | DNA‑binding transcriptional repressor YgiV |
| RA | 3,180,826 | G→A | E136K (GAA→AAA) | ygiC → | putative acid‑‑amine ligase YgiC |
| RA | 3,190,080 | G→A | G67D (GGC→GAC) | yqiH → | putative fimbrial chaperone YqiH |
| RA | 3,196,842 | G→A | L934L (CTG→TTG) | glnE ← | fused glutamine synthetase deadenylase/glutamine synthetase adenylyltransferase |
| RA | 3,212,352 | G→A | G416S (GGC→AGC) | dnaG → | DNA primase |
| RA | 3,215,625 | G→A | noncoding (28/76 nt) | ileX → | tRNA‑Ile |
| RA | 3,222,872 | G→A | W80* (TGG→TGA) | ebgA → | evolved beta‑D‑galactosidase subunit alpha |
| RA | 3,278,700 | G→A | intergenic (‑35/‑214) | agaR ← / → kbaZ | DNA‑binding transcriptional repressor AgaR/putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| RA | 3,280,814 | G→A | intergenic (+124/‑1162) | agaV → / → agaS | N‑acetyl‑D‑galactosamine specific PTS enzyme IIB component/putative galactosamine‑6‑phosphate deaminase/isomerase |
| RA | 3,284,611 | G→A | V148I (GTC→ATC) | agaB → | galactosamine‑specific PTS enzyme IIB component |
| RA | 3,294,210 | G→A | V271I (GTA→ATA) | lpoA → | outer membrane lipoprotein ‑ activator of MrcA activity |
| RA | 3,295,067 | G→A | M556I (ATG→ATA) | lpoA → | outer membrane lipoprotein ‑ activator of MrcA activity |
| RA | 3,295,290 | G→A | A631T (GCA→ACA) | lpoA → | outer membrane lipoprotein ‑ activator of MrcA activity |
| RA | 3,300,725 | G→A | P12S (CCG→TCG) | yhbS ← | putative N‑acetyltransferase YhbS |
| RA | 3,307,890 | G→A | A15V (GCC→GTC) | yrbN ← | uncharacterized protein YrbN |
| RA | 3,318,274 | G→A | noncoding (16/77 nt) | metY ← | tRNA‑Met |
| RA | 3,323,624 | G→A | S149S (AGC→AGT) | glmM ← | phosphoglucosamine mutase |
| RA | 3,327,196 | G→A | P157S (CCA→TCA) | rlmE ← | 23S rRNA 2'‑O‑ribose U2552 methyltransferase |
| JC JC | 3,335,208 | IS150 (+) +4 bp | intergenic (+21/+24) | sfsB → / ← murA | putative transcriptional regulator SfsB/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| RA | 3,336,411 | 2 bp→AT | coding (83‑84/1260 nt) | murA ← | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| RA | 3,347,801 | G→A | W229* (TGG→TGA) | rapZ → | RNase adaptor protein RapZ |
| RA | 3,348,518 | G→A | E23K (GAA→AAA) | yrbL → | protein kinase‑like domain‑containing protein YrbL |
| RA | 3,349,836 | C→T | L208L (CTG→CTA) | elbB ← | low activity glyoxalase ElbB |
| RA | 3,351,713 | G→A | S438F (TCT→TTT) | arcB ← | sensor histidine kinase ArcB |
| RA | 3,372,107 | C→T | G156G (GGG→GGA) | nanT ← | N‑acetylneuraminate:H(+) symporter |
| RA | 3,378,455 | C→T | G66D (GGC→GAC) | rplM ← | 50S ribosomal subunit protein L13 |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,414,646 | C→T | F261F (TTC→TTT) | acrE → | multidrug efflux pump membrane fusion lipoprotein AcrE |
| JC JC | 3,429,229 | IS2 (+) +5 bp | intergenic (‑467/‑3) | rrsD ← / → yrdA | 16S ribosomal RNA/hexapeptide repeat‑containing protein YrdA |
| RA | 3,436,697 | G→A | E60E (GAG→GAA) | trkA → | NAD‑binding component of Trk potassium transporters |
| RA | 3,439,561 | G→A | intergenic (‑52/+55) | yhdN ← / ← rplQ | DUF1992 domain‑containing protein YhdN/50S ribosomal subunit protein L17 |
| RA | 3,451,505 | G→A | T60T (ACC→ACT) | rplW ← | 50S ribosomal subunit protein L23 |
| RA | 3,458,230 | G→A | R618R (CGG→CGA) | gspD → | Type II secretion system protein GspD |
| RA | 3,459,867 | G→A | G17G (GGG→GGA) | gspF → | Type II secretion system protein GspF |
| RA | 3,463,308 | G→A | A129T (GCG→ACG) | gspK → | Type II secretion system protein GspK |
| RA | 3,474,425 | T→C | K43R (AAA→AGA) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,481,492 | G→A | W68* (TGG→TGA) | yheS → | putative ATP‑binding protein YheS |
| RA | 3,482,886 | C→T | P533L (CCA→CTA) | yheS → | putative ATP‑binding protein YheS |
| RA | 3,490,560 | G→A | G90G (GGC→GGT) | pabA ← | aminodeoxychorismate synthase subunit 2 |
| RA | 3,507,161 | C→T | G59D (GGT→GAT) | yhfT ← | uncharacterized protein YhfT |
| RA | 3,537,383 | C→T | intergenic (+95/‑2) | greB → / → yhgF | transcription elongation factor GreB/putative RNA‑binding protein YhgF |
| JC JC | 3,543,555 | IS150 (–) +3 bp | coding (389‑391/879 nt) | rpnA → | recombination‑promoting nuclease RpnA |
| RA | 3,545,630 | C→T | R3C (CGT→TGT) | nfuA → | iron‑sulfur cluster carrier protein NfuA |
| RA | 3,549,802 | C→T | G90D (GGC→GAC) | malQ ← | 4‑alpha‑glucanotransferase |
| RA | 3,551,420 | C→T | A352T (GCG→ACG) | malP ← | maltodextrin phosphorylase |
| RA | 3,551,909 | C→T | D189N (GAC→AAC) | malP ← | maltodextrin phosphorylase |
| RA | 3,554,195 | C→T | L371L (CTG→TTG) | malT → | DNA‑binding transcriptional activator MalT |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,577,715 | C→T | intergenic (‑123/+16) | gntK ← / ← gntR | D‑gluconate kinase, thermostable/DNA‑binding transcriptional repressor GntR |
| RA | 3,579,434 | C→T | G71D (GGT→GAT) | yhhW ← | quercetin 2,3‑dioxygenase |
| RA | 3,589,300 | C→T | G243D (GGC→GAC) | ugpE ← | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpE |
| RA | 3,589,321 | C→T | G236E (GGG→GAG) | ugpE ← | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpE |
| RA | 3,594,331 | C→T | E384K (GAA→AAA) | livM ← | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM |
| RA | 3,605,559 | C→T | A18T (GCC→ACC) | yhhM ← | DUF2500 domain‑containing protein YhhM |
| RA | 3,607,928 | C→T | P493L (CCC→CTC) | zntA → | Zn(2(+))/Cd(2(+))/Pb(2(+)) exporting P‑type ATPase |
| RA | 3,609,228 | C→T | F4F (TTC→TTT) | yhhQ → | queuosine precursor transporter |
| RA | 3,613,891 | C→T | S75S (AGC→AGT) | nikA → | Ni(2(+)) ABC transporter periplasmic binding protein |
| RA | 3,618,704 | C→T | A39A (GCC→GCT) | nikR → | DNA‑binding transcriptional repressor NikR |
| RA | 3,622,465 | C→T | P1092S (CCG→TCG) | rhsB → | rhs element protein RhsB |
| RA | 3,624,014 | C→T | intergenic (+232/‑364) | yhhH → / → yhhI | PF15631 family protein YhhH/putative transposase |
| RA | 3,628,866 | C→T | E225K (GAA→AAA) | rbbA ← | ribosome‑associated ATPase |
| RA | 3,629,921 | C→T | E228K (GAG→AAG) | yhiI ← | putative membrane fusion protein YhiI |
| RA | 3,630,852 | C→T | intergenic (‑74/+116) | yhiY ← / ← yhiJ | protein YhiY/DUF4049 domain‑containing protein YhiJ |
| RA | 3,639,252 | C→T | intergenic (+111/+133) | pitA → / ← uspB | metal phosphate:H(+) symporter PitA/universal stress protein B |
| RA | 3,643,643 | C→T | A514T (GCG→ACG) | prlC ← | oligopeptidase A |
| RA | 3,650,351 | C→T | P39S (CCA→TCA) | arsC → | arsenate reductase |
| RA | 3,655,280 | C→T | G208E (GGG→GAG) | yhiD ← | inner membrane protein YhiD |
| RA | 3,662,374 | G→A | S654N (AGC→AAC) | mdtF → | multidrug efflux pump RND permease MdtF |
| RA | 3,662,815 | C→T | A801V (GCC→GTC) | mdtF → | multidrug efflux pump RND permease MdtF |
| RA | 3,672,877 | C→T | A155V (GCC→GTC) | rcdB → | putative DNA‑binding transcriptional regulator YhjC |
| RA | 3,682,515 | C→T | M311I (ATG→ATA) | dctA ← | C4 dicarboxylate/orotate:H(+) symporter |
| RA | 3,682,654 | C→T | G265E (GGG→GAG) | dctA ← | C4 dicarboxylate/orotate:H(+) symporter |
| RA | 3,686,110 | C→T | G1022S (GGC→AGC) | bcsC ← | cellulose synthase outer membrane channel |
| RA | 3,702,034 | G→A | L279F (CTC→TTC) | dppF ← | dipeptide ABC transporter ATP binding subunit DppF |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| MC JC | 3,708,467 | Δ168 bp | [proK] | [proK] | |
| RA | 3,710,343 | C→T | G45S (GGC→AGC) | eptB ← | phosphoethanolamine transferase EptB |
| RA | 3,711,347 | C→T | V221I (GTA→ATA) | yhjX ← | putative transporter YhjX |
| RA | 3,721,115 | G→A | D146N (GAT→AAT) | insJ → | insertion element IS150 protein InsA |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,734,518 | C→T | R267C (CGC→TGC) | xylH → | xylose ABC transporter membrane subunit |
| RA | 3,736,852 | C→T | G109D (GGC→GAC) | bax ← | putative glycoside hydrolase Bax |
| RA | 3,737,907 | C→T | F137F (TTC→TTT) | malS → | alpha‑amylase |
| RA | 3,739,921 | C→T | P73S (CCA→TCA) | avtA → | valine‑‑pyruvate aminotransferase |
| RA | 3,740,157 | C→T | V151V (GTC→GTT) | avtA → | valine‑‑pyruvate aminotransferase |
| RA | 3,754,134 | C→T | A99T (GCC→ACC) | yiaW ← | DUF3302 domain‑containing protein YiaW |
| RA | 3,757,058 | G→A | A257V (GCT→GTT) | yiaY ← | L‑threonine dehydrogenase |
| RA | 3,759,817 | G→A | T15T (ACC→ACT) | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,761,230 | G→A | S7F (TCC→TTC) | selA ← | selenocysteine synthase |
| RA | 3,761,858 | G→A | P33L (CCC→CTC) | yibF ← | glutathione transferase‑like protein YibF |
| RA | 3,762,109 | C→T | intergenic (‑154/‑74) | yibF ← / → rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| RA | 3,767,891 | C→T | intergenic (+712/‑286) | yibA → / → yibG | putative lyase containing HEAT‑repeat/tetratricopeptide‑like domain‑containing protein YibG |
| RA | 3,770,330 | G→A | Y350Y (TAC→TAT) | yibH ← | inner membrane protein YibH |
| RA | 3,771,979 | G→T | intergenic (‑235/‑302) | yibI ← / → mtlA | DUF3302 domain‑containing protein YibI/mannitol‑specific PTS enzyme IICBA component |
| RA | 3,778,588 | C→T | T397I (ACC→ATC) | lldP → | lactate/glycolate:H(+) symporter LldP |
| RA | 3,778,752 | C→T | L452L (CTG→TTG) | lldP → | lactate/glycolate:H(+) symporter LldP |
| RA | 3,781,861 | G→A | T234T (ACC→ACT) | cysE ← | serine acetyltransferase |
| RA | 3,793,266 | G→A | P140S (CCT→TCT) | htrL ← | protein HtrL |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| JC | 3,822,651 | (CAGGAT)1→2 | coding (252/2109 nt) | spoT → | bifunctional (p)ppGpp synthase/hydrolase SpoT |
| RA | 3,823,016 | G→T | R206L (CGC→CTC) | spoT → | bifunctional (p)ppGpp synthase/hydrolase SpoT |
| RA | 3,823,162 | C→T | H255Y (CAC→TAC) | spoT → | bifunctional (p)ppGpp synthase/hydrolase SpoT |
| RA | 3,854,009 | G→A | A30T (GCT→ACT) | emrD → | multidrug efflux pump EmrD |
| RA | 3,864,357 | G→A | L153L (CTG→CTA) | yidP → | putative DNA‑binding transcriptional regulator YidP |
| RA | 3,865,764 | C→T | G170G (GGG→GGA) | yidE ← | putative transport protein YidE |
| RA | 3,869,637 | C→A | L87L (CTC→CTA) | cbrA → | colicin M resistance protein |
| RA | 3,871,363 | G→A | P123L (CCG→CTG) | dgoT ← | D‑galactonate:H(+) symporter |
| RA | 3,873,892 | G→A | L195F (CTT→TTT) | dgoK ← | 2‑dehydro‑3‑deoxygalactonokinase |
| RA | 3,875,237 | G→A | intergenic (‑77/‑201) | dgoR ← / → yidX | DNA‑binding transcriptional regulator DgoR/putative lipoprotein YidX |
| RA | 3,876,817 | G→A | P46S (CCG→TCG) | yidA ← | sugar phosphatase YidA |
| RA | 3,878,267 | G→A | A618V (GCT→GTT) | gyrB ← | DNA gyrase subunit B |
| RA | 3,878,536 | G→A | Y528Y (TAC→TAT) | gyrB ← | DNA gyrase subunit B |
| RA | 3,879,061 | C→T | M353I (ATG→ATA) | gyrB ← | DNA gyrase subunit B |
| RA | 3,883,818 | G→A | intergenic (‑89/‑208) | dnaA ← / → ysdD | chromosomal replication initiator protein DnaA/protein YsdD |
| RA | 3,896,736 | G→A | intergenic (‑127/‑38) | adeP ← / → yieH | adenine:H(+) symporter/6‑phosphogluconate phosphatase |
| RA | 3,898,481 | G→A | D154N (GAT→AAT) | cbrC → | PF03691 family colicin E2 tolerance protein CbrC |
| RA | 3,901,757 | C→T | G155D (GGT→GAT) | bglH ← | carbohydrate‑specific outer membrane porin, cryptic |
| RA | 3,902,025 | G→A | R66C (CGT→TGT) | bglH ← | carbohydrate‑specific outer membrane porin, cryptic |
| RA | 3,908,073 | C→T | Q98Q (CAG→CAA) | pstB ← | phosphate ABC transporter ATP binding subunit |
| RA | 3,911,379 | C→T | Q49Q (CAG→CAA) | pstS ← | phosphate ABC transporter periplasmic binding protein |
| RA | 3,912,074 | G→A | S532F (TCC→TTC) | glmS ← | L‑glutamine‑‑D‑fructose‑6‑phosphate aminotransferase |
| RA | 3,913,223 | G→A | A149V (GCT→GTT) | glmS ← | L‑glutamine‑‑D‑fructose‑6‑phosphate aminotransferase |
| RA | 3,915,731 | G→A | A81V (GCC→GTC) | atpC ← | ATP synthase F1 complex subunit epsilon |
| RA | 3,922,501 | G→A | intergenic (‑61/+556) | atpI ← / ← rsmG | ATP synthase accessory factor AtpI/16S rRNA m(7)G527 methyltransferase |
| RA | 3,933,173 | G→A | V620I (GTC→ATC) | kup → | K(+):H(+) symporter Kup |
| RA | 3,941,924 | G→A | noncoding (117/1542 nt) | rrsC → | 16S ribosomal RNA |
| RA | 3,949,381 | C→T | E197K (GAA→AAA) | yifB ← | putative magnesium chelatase YifB |
| RA | 3,951,292 | C→T | intergenic (+735/‑909) | ilvX → / → ilvM | uncharacterized protein IlvX/acetolactate synthase II subunit IlvM |
| RA | 3,954,288 | C→T | L271L (CTG→TTG) | ilvD → | dihydroxy‑acid dehydratase |
| RA | 3,955,095 | C→T | L540L (CTG→TTG) | ilvD → | dihydroxy‑acid dehydratase |
| RA | 3,960,251 | C→T | intergenic (‑438/‑426) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep |
| RA | 3,983,395 | C→T | G146G (GGC→GGT) | aslB → | putative anaerobic sulfatase maturation enzyme AslB |
| RA | 3,989,779 | C→T | S17N (AGC→AAC) | hemD ← | uroporphyrinogen‑III synthase |
| RA | 3,993,531 | T→C | R793R (CGT→CGC) | cyaA → | adenylate cyclase |
| RA | 3,996,049 | T→A | L156* (TTG→TAG) | yigA → | DUF484 domain‑containing protein YigA |
| RA | 4,001,659 | C→T | F78F (TTC→TTT) | corA → | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| RA | 4,006,024 | C→T | S54F (TCC→TTC) | recQ → | ATP‑dependent DNA helicase RecQ |
| RA | 4,011,802 | C→T | P243S (CCG→TCG) | bioP → | biotin transporter |
| RA | 4,013,019 | C→T | intergenic (‑203/‑34) | metR ← / → metE | DNA‑binding transcriptional dual regulator MetR/cobalamin‑independent homocysteine transmethylase |
| RA | 4,032,682 | C→T | S64F (TCT→TTT) | yigZ → | IMPACT family member YigZ |
| RA | 4,036,933 | C→T | noncoding (1403/1542 nt) | rrsA → | 16S ribosomal RNA |
| RA | 4,037,229 | C→T | intergenic (+12/‑31) | ileT → / → alaT | tRNA‑Ile/tRNA‑Ala |
| RA | 4,037,875 | C→T | noncoding (357/2905 nt) | rrlA → | 23S ribosomal RNA |
| RA | 4,044,246 | C→T | I16I (ATC→ATT) | yihF → | DUF945 domain‑containing protein YihF |
| RA | 4,054,463 | C→T | V272V (GTG→GTA) | glnG ← | DNA‑binding transcriptional dual regulator NtrC |
| RA | 4,056,080 | C→T | G87E (GGG→GAG) | glnL ← | protein histidine kinase NtrB |
| RA | 4,067,529 | C→T | G583D (GGC→GAC) | yihQ ← | sulfoquinovosidase |
| RA | 4,068,181 | C→T | E366K (GAG→AAG) | yihQ ← | sulfoquinovosidase |
| RA | 4,070,844 | C→T | E305K (GAA→AAA) | yihS ← | sulfoquinovose isomerase |
| RA | 4,083,333 | C→T | Q830Q (CAG→CAA) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,084,903 | T→G | N307T (AAC→ACC) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,092,703 | A→G | F41L (TTC→CTC) | frvA ← | putative PTS enzyme IIA component FrvA |
| RA | 4,093,564 | C→T | V237I (GTA→ATA) | rhaD ← | rhamnulose‑1‑phosphate aldolase |
| RA | 4,094,457 | C→T | intergenic (‑185/+266) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,096,043 | C→T | S469N (AGT→AAT) | rhaB ← | rhamnulokinase |
| RA | 4,101,726 | G→A | G13R (GGG→AGG) | kdgT → | 2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter |
| RA | 4,113,851 | G→A | H208Y (CAT→TAT) | fpr ← | flavodoxin/ferredoxin‑NADP(+) reductase |
| RA | 4,117,947 | C→T | W48* (TGG→TGA) | glpF ← | glycerol facilitator |
| RA | 4,121,166 | C→T | E194E (GAG→GAA) | hslU ← | ATPase component of the HslVU protease |
| RA | 4,123,923 | +A | coding (534/1026 nt) | cytR ← | DNA‑binding transcriptional repressor CytR |
| RA | 4,125,151 | C→T | V554I (GTT→ATT) | priA ← | primosomal protein N' |
| RA | 4,133,661 | C→T | intergenic (+155/‑174) | metF → / → katG | 5,10‑methylenetetrahydrofolate reductase/catalase/hydroperoxidase HPI |
| RA | 4,143,134 | C→T | A202V (GCC→GTC) | frwC → | putative PTS enzyme IIC component FrwC |
| RA | 4,143,377 | C→T | S283L (TCA→TTA) | frwC → | putative PTS enzyme IIC component FrwC |
| RA | 4,147,160 | C→T | T8I (ACC→ATC) | frwD → | putative PTS enzyme IIB component FrwD |
| RA | 4,147,572 | C→T | S249N (AGC→AAC) | yijO ← | putative DNA‑binding transcriptional regulator YijO |
| RA | 4,161,248 | G→T | G61V (GGC→GTC) | fabR → | DNA‑binding transcriptional repressor FabR |
| RA | 4,164,123 | C→G | A162G (GCA→GGA) | btuB → | cobalamin outer membrane transporter |
| RA | 4,164,339 | G→A | W234* (TGG→TAG) | btuB → | cobalamin outer membrane transporter |
| RA | 4,164,868 | G→A | G410G (GGG→GGA) | btuB → | cobalamin outer membrane transporter |
| RA | 4,165,852 | C→T | S142F (TCT→TTT) | murI → | glutamate racemase |
| RA | 4,181,775 | C→T | I177I (ATC→ATT) | rpoB → | RNA polymerase subunit beta |
| RA | 4,188,732 | C→T | S1128F (TCC→TTC) | rpoC → | RNA polymerase subunit beta' |
| RA | 4,205,696 | C→T | G79D (GGC→GAC) | purD ← | phosphoribosylamine‑‑glycine ligase |
| RA | 4,212,931 | C→T | noncoding (2889/2904 nt) | rrlE → | 23S ribosomal RNA |
| RA | 4,214,745 | C→T | P156S (CCT→TCT) | metA → | homoserine O‑succinyltransferase |
| RA | 4,215,142 | G→A | W288* (TGG→TAG) | metA → | homoserine O‑succinyltransferase |
| RA | 4,215,347 | T→A | intergenic (+138/‑131) | metA → / → aceB | homoserine O‑succinyltransferase/malate synthase A |
| RA | 4,216,997 | C→T | A507V (GCC→GTC) | aceB → | malate synthase A |
| RA | 4,222,297 | C→T | S64N (AGC→AAC) | arpA ← | regulator of acetyl CoA synthetase |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,227,956 | C→T | L76L (CTG→TTG) | yjbB → | putative inorganic phosphate export protein YjbB |
| RA | 4,240,892 | C→T | A455T (GCA→ACA) | xylE ← | D‑xylose:H(+) symporter |
| RA | 4,243,309 | C→T | A70T (GCT→ACT) | malG ← | maltose ABC transporter membrane subunit MalG |
| RA | 4,244,133 | C→T | A315T (GCG→ACG) | malF ← | maltose ABC transporter membrane subunit MalF |
| RA | 4,246,490 | C→T | intergenic (‑71/‑294) | malE ← / → malK | maltose ABC transporter periplasmic binding protein/maltose ABC transporter ATP binding subunit |
| RA | 4,267,249 | C→T | L46L (CTG→TTG) | tyrB → | tyrosine aminotransferase |
| RA | 4,278,534 | C→T | S19L (TCA→TTA) | ghxP → | guanine/hypoxanthine transporter GhxP |
| RA | 4,282,332 | (A)5→6 | coding (744/1293 nt) | yjcF ← | pentapeptide repeat‑containing protein YjcF |
| RA | 4,293,781 | 2 bp→AT | coding (239‑240/597 nt) | nrfG → | putative formate‑dependent nitrite reductase complex subunit NrfG |
| RA | 4,295,008 | C→T | S176S (TCC→TCT) | gltP → | glutamate/aspartate : H(+) symporter GltP |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,302,088 | G→A | P331S (CCA→TCA) | mdtO ← | putative multidrug efflux pump subunit MdtO |
| RA | 4,313,171 | C→T | intergenic (‑180/‑179) | alsR ← / → rpiB | DNA‑binding transcriptional repressor AlsR/allose‑6‑phosphate isomerase/ribose‑5‑phosphate isomerase B |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,358,109 | A→G | F170S (TTC→TCC) | cadA ← | lysine decarboxylase 1 |
| JC JC | 4,365,462 | IS150 (–) +3 bp | intergenic (‑106/+8) | cutA ← / ← dcuA | copper binding protein CutA/C4‑dicarboxylate transporter DcuA |
| JC JC | 4,370,658 | IS150 (+) +3 bp | intergenic (‑246/‑28) | yjeH ← / → groS | L‑methionine/branched chain amino acid exporter/cochaperonin GroES |
| JC JC | 4,385,870 | IS2 (–) +5 bp | coding (167‑171/315 nt) | yjeO → | DUF2645 domain‑containing inner membrane protein YjeO |
| RA | 4,392,997 | G→A | V357V (GTC→GTT) | queG ← | epoxyqueuosine reductase |
| RA | 4,393,552 | G→A | F172F (TTC→TTT) | queG ← | epoxyqueuosine reductase |
| RA | 4,396,373 | C→T | T103T (ACC→ACT) | amiB → | N‑acetylmuramoyl‑L‑alanine amidase B |
| RA | 4,396,772 | T→C | F236F (TTT→TTC) | amiB → | N‑acetylmuramoyl‑L‑alanine amidase B |
| RA | 4,399,936 | G→A | E229K (GAA→AAA) | miaA → | tRNA dimethylallyltransferase |
| RA | 4,423,829 | G→A | G44S (GGC→AGC) | ulaF → | L‑ribulose‑5‑phosphate 4‑epimerase UlaF |
| RA | 4,425,688 | C→A | H57N (CAC→AAC) | priB → | primosomal replication protein N |
| RA | 4,425,696 | C→A | N59K (AAC→AAA) | priB → | primosomal replication protein N |
| JC JC | 4,430,711 | IS150 (–) +3 bp | coding (848‑850/1413 nt) | cycA → | D‑serine/alanine/glycine/:H(+)symporter |
| RA | 4,447,294 | G→A | G1061G (GGG→GGA) | tamB → | translocation and assembly module subunit TamB |
| RA | 4,460,950 | C→T | G571S (GGT→AGT) | nrdD ← | anaerobic ribonucleoside‑triphosphate reductase |
| RA | 4,465,585 | G→A | S199F (TCT→TTT) | treB ← | trehalose‑specific PTS enzyme IIBC component |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,475,255 | T→C | C132R (TGC→CGC) | tabA → | DUF386 domain‑containing toxin‑antitoxin biofilm protein TabA |
| RA | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| RA | 4,481,826 | G→A | S671L (TCG→TTG) | valS ← | valine‑‑tRNA ligase |
| RA | 4,486,098 | G→A | *19* (TGA→TAA) | ytgB → | protein YtgB |
| RA | 4,488,217 | G→A | L300L (CTG→CTA) | lptG → | lipopolysaccharide transport system protein LptG |
| RA | 4,496,431 | A→G | noncoding (27/85 nt) | leuX → | tRNA‑Leu |
| RA | 4,496,440 | A→T | noncoding (36/85 nt) | leuX → | tRNA‑Leu |
| RA | 4,498,003 | G→A | intergenic (+1514/‑269) | leuX → / → insC6 | tRNA‑Leu/IS2 insertion element repressor InsA |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,512,541 | C→T | G290E (GGG→GAG) | fecC ← | ferric citrate ABC transporter membrane subunit FecC |
| RA | 4,512,767 | C→T | A215T (GCG→ACG) | fecC ← | ferric citrate ABC transporter membrane subunit FecC |
| RA | 4,523,244 | C→T | G284D (GGC→GAC) | yjhG ← | D‑xylonate dehydratase |
| RA | 4,525,237 | G→A | A189A (GCC→GCT) | yjhI ← | putative DNA‑binding transcriptional regulator YjhI |
| RA | 4,531,425 | C→T | R76H (CGC→CAC) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| RA | 4,532,409 | T→G | intergenic (‑758/+28) | sgcX ← / ← yjhP | putative endoglucanase with Zn‑dependent exopeptidase domain/putative methyltransferase YjhP |
| RA | 4,536,062 | G→A | intergenic (‑2009/‑535) | topAI ← / → ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| RA | 4,536,716 | C→T | W293* (TGG→TGA) | nanS ← | N‑acetyl‑9‑O‑acetylneuraminate esterase |
| JC JC | 4,542,448 | IS5 (–) +4 bp | coding (412‑415/597 nt) | fimE → | regulator for fimA |
| RA | 4,546,601 | C→T | I502I (ATC→ATT) | fimD → | type I fimbriae usher protein |
| RA | 4,553,339 | C→T | L147L (CTG→TTG) | uxuB → | D‑mannonate oxidoreductase |
| RA | 4,560,446 | C→T | G79S (GGC→AGC) | yjiH ← | uncharacterized protein YjiH |
| RA | 4,571,116 | C→T | E153E (GAG→GAA) | yjiR ← | fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
| RA | 4,577,627 | C→T | S111N (AGC→AAC) | mcrC ← | Type IV methyl‑directed restriction enzyme EcoKMcrBC subunit |
| RA | 4,578,534 | C→T | E268E (GAG→GAA) E268E (GAG→GAA) |
mcrB ← mcrB ← |
5‑methylcytosine‑specific restriction enzyme subunit McrB 5‑methylcytosine‑specific restriction enzyme subunit McrB |
| RA | 4,584,958 | C→T | A602T (GCC→ACC) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| RA | 4,589,433 | C→T | G616D (GGC→GAC) | btsT ← | pyruvate:H(+) symporter |
| RA | 4,593,756 | C→T | G323R (GGG→AGG) | lgoT ← | galactonate:H(+) symporter |
| RA | 4,599,184 | C→T | G86G (GGG→GGA) | opgB ← | phosphoglycerol transferase I |
| RA | 4,609,336 | (C)7→8 | intergenic (+13/‑78) | yjjG → / → prfC | pyrimidine 5'‑nucleotidase YjjG/peptide chain release factor RF3 |
| RA | 4,611,061 | C→T | intergenic (+58/‑335) | prfC → / → osmY | peptide chain release factor RF3/periplasmic chaperone OsmY |
| RA | 4,614,387 | C→T | intergenic (+127/+293) | yjjV → / ← yjjW | putative metal‑dependent hydrolase YjjV/putative glycyl‑radical enzyme activating enzyme YjjW |
| RA | 4,614,722 | C→T | V274V (GTG→GTA) | yjjW ← | putative glycyl‑radical enzyme activating enzyme YjjW |
| RA | 4,632,342 | C→T | S537F (TCT→TTT) | slt → | soluble lytic murein transglycosylase |
| RA | 4,636,541 | C→T | L179L (CTG→TTG) | creB → | DNA‑binding transcriptional regulator CreB |
| RA | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| RA | 4,638,240 | G→A | L21L (TTG→TTA) | creD → | putative inner membrane protein CreD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257823 | 258675–257909 | 87–853 | 125 [0] | [0] 81 | crl–insA9 | crl,insB9,insA9 |
| * | * | ÷ | NC_000913 | 1196292 | 1211446 | 15155 | 25 [24] | [24] 25 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 1492145 | 1492210 | 66 | 63 [0] | [0] 94 | [sokB] | [sokB] |
| * | * | ÷ | NC_000913 | 1978495 | 1979270 | 776 | 85 [0] | [0] 125 | insB5–insA5 | insB5,insA5 |
| * | * | ÷ | NC_000913 | 2170380–2171427 | 2175000 | 3574–4621 | 26 [22] | [0] 84 | [insE5]–[gatA] | [insE5],insF5,gatR,gatD,gatB,[gatA] |
| * | * | ÷ | NC_000913 | 2755537 | 2755747 | 211 | 26 [23] | [24] 26 | [ssrA] | [ssrA] |
| * | * | ÷ | NC_000913 | 3223868 | 3262483 | 38616 | 93 [0] | [0] 110 | [ebgA]–[tdcD] | [ebgA],ebgC,ygjI,ygjJ,ygjK,fadH,higA,higB,rlmG,ygjP,ygjQ,ygjR,alx,sstT,ygjV,uxaA,uxaC,exuT,exuR,yqiM,yqjA,mzrA,yqjC,yqjD,yqjE,yqjK,yqjF,yqjG,yhaH,yhaI,yhaJ,yhaK,yhaL,cyuA,cyuP,tdcG,tdcF,tdcE,[tdcD] |
| * | * | ÷ | NC_000913 | 3423829–3424235 | 3424482–3424239 | 5–654 | 25 [24] | [23] 25 | [rrlD] | [rrlD] |
| * | * | ÷ | NC_000913 | 4035370–4036866 | 4036866 | 1–1497 | 26 [24] | [23] 26 | [rrsA] | [rrsA] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257822 | 0 (0.000) | 124 (1.390) | 82/598 | 0.0 | 100% | intergenic (+51/‑7) | frsA/crl | fermentation‑respiration switch protein/RNA polymerase holoenzyme assembly factor Crl |
| ? | NC_000913 | = 382590 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 258676 = | 0 (0.000) | 47 (0.720) +81 bp |
40/436 | 0.3 | 100% | pseudogene (1/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl |
| ? | NC_000913 | = 1469241 | NA (NA) | intergenic (‑92/‑5) | insC2/ydbA | IS2 insertion element repressor InsA/putative outer membrane protein, N‑terminal fragment | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 85 (0.950) | 58/598 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1978494 | 0 (0.000) | intergenic (‑297/+24) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB | |||||
| * | ? | NC_000913 | = 1492144 | 0 (0.000) | 63 (0.710) | 44/592 | 0.7 | 100% | noncoding (26/57 nt) | sokB | putative small regulatory RNA antitoxin SokB |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 1492211 = | 0 (0.000) | 94 (1.060) | 62/594 | 0.2 | 100% | intergenic (+36/‑259) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 1979271 = | 0 (0.000) | 125 (1.400) | 89/598 | 0.0 | 100% | intergenic (‑56/‑482) | insA5/uspC | IS1 family protein InsA/universal stress protein C |
| ? | NC_000913 | = 2102947 | NA (NA) | pseudogene (443/446 nt) | wbbL | interrupted rhamnosyltransferase WbbL | |||||
| * | ? | NC_000913 | = 2170611 | NA (NA) | 84 (0.950) | 61/594 | 0.2 | 100% | noncoding (441/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | 2175001 = | 0 (0.000) | coding (49/453 nt) | gatA | galactitol‑specific PTS enzyme IIA component | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 110 (1.240) | 76/596 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3262484 = | 0 (0.000) | coding (1177/1209 nt) | tdcD | propionate kinase | |||||
| * | ? | NC_000913 | 3130146 = | NA (NA) | 93 (1.040) | 65/598 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3223867 | 0 (0.000) | coding (1235/3093 nt) | ebgA | evolved beta‑D‑galactosidase subunit alpha | |||||
| * | ? | NC_000913 | 4542682 = | 99 (1.110) | 37 (0.430) | 33/580 | 1.3 | 26.1% | intergenic (+49/‑433) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | 4542996 = | 114 (1.320) | intergenic (+363/‑119) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||