mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 64,536 | C→T | V415V (GTG→GTA) | polB ← | DNA polymerase II |
| RA | 64,539 | T→C | S414S (TCA→TCG) | polB ← | DNA polymerase II |
| RA | 64,593 | C→T | P396P (CCG→CCA) | polB ← | DNA polymerase II |
| RA | 64,610 | G→A | L391F (CTC→TTC) | polB ← | DNA polymerase II |
| RA | 64,635 | A→G | H382H (CAT→CAC) | polB ← | DNA polymerase II |
| RA | 64,641 | T→A | R380R (CGA→CGT) | polB ← | DNA polymerase II |
| RA | 64,644 | C→A | P379P (CCG→CCT) | polB ← | DNA polymerase II |
| RA | 64,665 | T→C | A372A (GCA→GCG) | polB ← | DNA polymerase II |
| RA | 64,677 | A→T | G368G (GGT→GGA) | polB ← | DNA polymerase II |
| RA | 64,680 | G→C | G367G (GGC→GGG) | polB ← | DNA polymerase II |
| RA | 64,686 | T→G | R365R (CGA→CGC) | polB ← | DNA polymerase II |
| RA | 64,692 | C→T | V363V (GTG→GTA) | polB ← | DNA polymerase II |
| RA | 64,713 | T→C | A356A (GCA→GCG) | polB ← | DNA polymerase II |
| RA | 64,716 | C→T | R355R (CGG→CGA) | polB ← | DNA polymerase II |
| RA | 64,749 | G→A | H344H (CAC→CAT) | polB ← | DNA polymerase II |
| RA | 64,755 | G→A | I342I (ATC→ATT) | polB ← | DNA polymerase II |
| RA | 64,794 | T→C | A329A (GCA→GCG) | polB ← | DNA polymerase II |
| RA | 64,883 | G→A | L300L (CTA→TTA) | polB ← | DNA polymerase II |
| RA | 64,896 | A→G | T295T (ACT→ACC) | polB ← | DNA polymerase II |
| RA | 65,028 | G→A | S251S (AGC→AGT) | polB ← | DNA polymerase II |
| RA | 65,031 | A→G | N250N (AAT→AAC) | polB ← | DNA polymerase II |
| RA | 65,043 | A→C | L246L (CTT→CTG) | polB ← | DNA polymerase II |
| RA | 65,046 | A→C | R245R (CGT→CGG) | polB ← | DNA polymerase II |
| RA | 65,057 | G→T | L242I (CTT→ATT) | polB ← | DNA polymerase II |
| RA | 65,169 | C→T | L204L (TTG→CTA) | polB ← | DNA polymerase II |
| RA | 65,171 | A→G | L204L (TTG→CTA) | polB ← | DNA polymerase II |
| RA | 65,202 | G→A | F193F (TTC→TTT) | polB ← | DNA polymerase II |
| RA | 65,208 | A→G | L191L (CTT→CTC) | polB ← | DNA polymerase II |
| RA | 65,213 | A→C | S190A (TCG→GCG) | polB ← | DNA polymerase II |
| RA | 65,232 | C→T | P183P (CCG→CCA) | polB ← | DNA polymerase II |
| RA | 65,316 | T→A | I155I (ATA→ATT) | polB ← | DNA polymerase II |
| RA | 65,381 | T→C | T134A (ACT→GCT) | polB ← | DNA polymerase II |
| RA | 65,454 | A→G | R109R (CGT→CGC) | polB ← | DNA polymerase II |
| RA | 65,594 | A→C | F63V (TTT→GTT) | polB ← | DNA polymerase II |
| RA | 65,668 | G→A | P38L (CCG→CTG) | polB ← | DNA polymerase II |
| RA | 65,785 | A→T | intergenic (‑5/+70) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 65,788 | A→T | intergenic (‑8/+67) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 65,811 | G→T | intergenic (‑31/+44) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 65,905 | C→T | D216N (GAT→AAT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,032 | C→T | P173P (CCG→CCA) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,041 | G→A | S170S (TCC→TCT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,053 | A→G | V166V (GTT→GTC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,092 | A→G | F153F (TTT→TTC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,134 | G→A | G139G (GGC→GGT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,227 | A→G | G108G (GGT→GGC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,245 | G→A | T102T (ACC→ACT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,263 | C→T | T96T (ACG→ACA) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,266 | A→G | H95H (CAT→CAC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,287 | G→C | P88P (CCC→CCG) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,308 | C→T | R81R (CGG→CGA) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,323 | G→A | D76D (GAC→GAT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,343 | T→C | T70A (ACG→GCG) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,403 | C→T | V50I (GTC→ATC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,494 | G→A | H19H (CAC→CAT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,518 | T→C | E11E (GAA→GAG) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 66,686 | C→G | intergenic (‑136/+149) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,688 | G→A | intergenic (‑138/+147) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,784 | A→T | intergenic (‑234/+51) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,819 | T→C | intergenic (‑269/+16) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,823 | G→T | intergenic (‑273/+12) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,830 | G→A | intergenic (‑280/+5) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| RA | 66,847 | C→T | G497G (GGG→GGA) | araA ← | L‑arabinose isomerase |
| RA | 66,898 | T→G | T480T (ACA→ACC) | araA ← | L‑arabinose isomerase |
| RA | 66,901 | G→A | D479D (GAC→GAT) | araA ← | L‑arabinose isomerase |
| RA | 66,946 | T→C | Q464Q (CAA→CAG) | araA ← | L‑arabinose isomerase |
| RA | 66,970 | T→C | A456A (GCA→GCG) | araA ← | L‑arabinose isomerase |
| RA | 67,111 | G→A | C409C (TGC→TGT) | araA ← | L‑arabinose isomerase |
| RA | 67,123 | T→C | L405L (CTA→CTG) | araA ← | L‑arabinose isomerase |
| RA | 67,152 | A→G | L396L (TTG→CTG) | araA ← | L‑arabinose isomerase |
| RA | 67,171 | G→A | G389G (GGC→GGT) | araA ← | L‑arabinose isomerase |
| RA | 67,195 | G→T | R381R (CGC→CGA) | araA ← | L‑arabinose isomerase |
| RA | 67,259 | G→A | A360V (GCA→GTA) | araA ← | L‑arabinose isomerase |
| RA | 67,264 | G→A | I358I (ATC→ATT) | araA ← | L‑arabinose isomerase |
| RA | 67,405 | A→G | T311T (ACT→ACC) | araA ← | L‑arabinose isomerase |
| RA | 67,471 | A→T | P289P (CCT→CCA) | araA ← | L‑arabinose isomerase |
| RA | 67,596 | T→C | K248E (AAA→GAA) | araA ← | L‑arabinose isomerase |
| RA | 67,612 | G→T | A242A (GCC→GCA) | araA ← | L‑arabinose isomerase |
| RA | 67,759 | G→A | G193G (GGC→GGT) | araA ← | L‑arabinose isomerase |
| RA | 67,798 | T→A | R180R (CGA→CGT) | araA ← | L‑arabinose isomerase |
| RA | 67,834 | G→A | V168V (GTC→GTT) | araA ← | L‑arabinose isomerase |
| RA | 67,900 | C→G | V146V (GTG→GTC) | araA ← | L‑arabinose isomerase |
| RA | 68,236 | G→A | V34V (GTC→GTT) | araA ← | L‑arabinose isomerase |
| RA | 68,468 | C→T | E527E (GAG→GAA) | araB ← | ribulokinase |
| RA | 68,476 | A→G | C525R (TGC→CGC) | araB ← | ribulokinase |
| RA | 68,519 | A→G | A510A (GCT→GCC) | araB ← | ribulokinase |
| RA | 68,678 | T→C | A457A (GCA→GCG) | araB ← | ribulokinase |
| RA | 68,693 | A→G | V452V (GTT→GTC) | araB ← | ribulokinase |
| RA | 68,837 | C→T | P404P (CCG→CCA) | araB ← | ribulokinase |
| RA | 68,840 | T→C | T403S (ACA→TCG) | araB ← | ribulokinase |
| RA | 68,842 | T→A | T403S (ACA→TCG) | araB ← | ribulokinase |
| RA | 68,846 | G→A | R401R (CGC→CGT) | araB ← | ribulokinase |
| RA | 68,849 | G→A | G400G (GGC→GGT) | araB ← | ribulokinase |
| RA | 68,956 | T→C | T365A (ACG→GCG) | araB ← | ribulokinase |
| RA | 69,001 | C→T | G350S (GGC→AGC) | araB ← | ribulokinase |
| RA | 69,014 | A→G | F345F (TTT→TTC) | araB ← | ribulokinase |
| RA | 69,323 | A→G | T242T (ACT→ACC) | araB ← | ribulokinase |
| RA | 69,400 | G→A | L217L (CTG→TTG) | araB ← | ribulokinase |
| RA | 69,605 | A→G | G148G (GGT→GGC) | araB ← | ribulokinase |
| RA | 69,611 | G→A | Y146Y (TAC→TAT) | araB ← | ribulokinase |
| RA | 69,629 | G→A | N140N (AAC→AAT) | araB ← | ribulokinase |
| RA | 69,752 | T→A | G99G (GGA→GGT) | araB ← | ribulokinase |
| RA | 69,935 | C→T | Q38Q (CAG→CAA) | araB ← | ribulokinase |
| RA | 69,981 | G→C | T23S (ACC→AGC) | araB ← | ribulokinase |
| RA | 69,983 | A→G | A22A (GCT→GCC) | araB ← | ribulokinase |
| RA | 70,289 | G→T | intergenic (‑241/‑98) | araB ← / → araC | ribulokinase/DNA‑binding transcriptional dual regulator AraC |
| RA | 70,371 | T→C | intergenic (‑323/‑16) | araB ← / → araC | ribulokinase/DNA‑binding transcriptional dual regulator AraC |
| RA | 70,434 | C→T | N16N (AAC→AAT) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 70,581 | C→T | V65V (GTC→GTT) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 70,740 | T→G | G118G (GGT→GGG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,079 | C→T | R231R (CGC→CGT) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,082 | T→C | I232I (ATT→ATC) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,085 | T→C | S233S (AGT→AGC) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,109 | T→C | T241T (ACT→ACC) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,175 | A→G | R263R (CGA→CGG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,214 | T→C | F276F (TTT→TTC) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 71,386 | C→T | S12S (TCC→TCT) | yabI → | DedA family protein YabI |
| RA | 71,543 | A→G | I65V (ATT→GTC) | yabI → | DedA family protein YabI |
| RA | 71,545 | T→C | I65V (ATT→GTC) | yabI → | DedA family protein YabI |
| RA | 71,548 | C→T | G66G (GGC→GGT) | yabI → | DedA family protein YabI |
| RA | 71,551 | 2 bp→TC | coding (201‑202/765 nt) | yabI → | DedA family protein YabI |
| RA | 71,555 | A→C | M69L (ATG→CTG) | yabI → | DedA family protein YabI |
| RA | 71,569 | T→C | I73I (ATT→ATC) | yabI → | DedA family protein YabI |
| RA | 71,572 | T→C | S74S (TCT→TCC) | yabI → | DedA family protein YabI |
| RA | 71,584 | T→C | G78G (GGT→GGC) | yabI → | DedA family protein YabI |
| RA | 71,639 | C→T | L97L (CTA→TTA) | yabI → | DedA family protein YabI |
| RA | 71,644 | T→C | L98L (CTT→CTC) | yabI → | DedA family protein YabI |
| RA | 71,701 | T→C | R117R (CGT→CGC) | yabI → | DedA family protein YabI |
| RA | 71,764 | T→A | A138A (GCT→GCA) | yabI → | DedA family protein YabI |
| RA | 71,770 | T→C | F140F (TTT→TTC) | yabI → | DedA family protein YabI |
| RA | 71,806 | G→A | P152P (CCG→CCA) | yabI → | DedA family protein YabI |
| RA | 71,824 | A→T | P158P (CCA→CCT) | yabI → | DedA family protein YabI |
| RA | 71,857 | T→A | P169P (CCT→CCA) | yabI → | DedA family protein YabI |
| RA | 71,875 | T→C | G175G (GGT→GGC) | yabI → | DedA family protein YabI |
| RA | 71,899 | A→G | A183A (GCA→GCG) | yabI → | DedA family protein YabI |
| RA | 71,902 | A→G | T184T (ACA→ACG) | yabI → | DedA family protein YabI |
| RA | 71,908 | G→A | V186V (GTG→GTA) | yabI → | DedA family protein YabI |
| RA | 71,912 | T→G | L188V (TTG→GTG) | yabI → | DedA family protein YabI |
| RA | 71,962 | G→A | A204A (GCG→GCA) | yabI → | DedA family protein YabI |
| RA | 71,965 | T→C | T205T (ACT→ACC) | yabI → | DedA family protein YabI |
| RA | 71,968 | C→T | D206D (GAC→GAT) | yabI → | DedA family protein YabI |
| RA | 71,974 | G→A | L208L (TTG→TTA) | yabI → | DedA family protein YabI |
| RA | 71,989 | C→G | S213S (TCC→TCG) | yabI → | DedA family protein YabI |
| RA | 71,995 | T→C | G215G (GGT→GGC) | yabI → | DedA family protein YabI |
| RA | 72,117 | A→G | intergenic (+2/+112) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,121 | A→T | intergenic (+6/+108) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,151 | 2 bp→GA | intergenic (+36/+77) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,183 | 2 bp→GT | intergenic (+68/+45) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,202 | C→T | intergenic (+87/+27) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,217 | C→T | intergenic (+102/+12) | yabI → / ← thiQ | DedA family protein YabI/thiamine ABC transporter ATP binding subunit |
| RA | 72,253 | C→T | S225S (TCG→TCA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,290 | A→T | M213K (ATG→AAG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,322 | T→C | V202V (GTA→GTG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,325 | T→C | V201V (GTA→GTG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,349 | C→G | A193A (GCG→GCC) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,361 | G→A | S189S (AGC→AGT) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,367 | C→T | S187S (TCG→TCA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,381 | G→A | L183L (CTA→TTA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,423 | A→G | L169L (TTG→CTG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,493 | T→C | V145V (GTA→GTG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,517 | T→G | R137R (CGA→CGC) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,547 | C→A | P127P (CCG→CCT) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,605 | C→T | G108E (GGG→GAG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,614 | A→G | V105A (GTA→GCA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,661 | T→C | A89A (GCA→GCG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,676 | G→A | S84S (AGC→AGT) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,691 | C→T | E79E (GAG→GAA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,731 | A→G | M66T (ATG→ACG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,733 | A→C | T65T (ACT→ACG) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,736 | T→G | T64T (ACA→ACC) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,745 | T→A | V61V (GTA→GTT) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,751 | A→G | D59D (GAT→GAC) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,799 | A→G | N43N (AAT→AAC) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,820 | C→T | A36A (GCG→GCA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,862 | C→T | V22V (GTG→GTA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,892 | G→T | H12Q (CAC→CAA) | thiQ ← | thiamine ABC transporter ATP binding subunit |
| RA | 72,928 | T→C | N532D (AAT→GAT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 72,974 | C→T | L516L (CTG→CTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,001 | A→G | G507G (GGT→GGC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,052 | G→A | T490T (ACC→ACT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,115 | T→G | A469A (GCA→GCC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,121 | G→A | A467A (GCC→GCT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,163 | C→G | V453V (GTG→GTC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,178 | T→C | S448S (TCA→TCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,193 | C→G | G443G (GGG→GGC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,208 | T→C | L438L (TTA→TTG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,214 | G→A | S436S (AGC→AGT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,253 | C→T | V423V (GTG→GTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,319 | T→C | P401P (CCA→CCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,328 | G→A | I398I (ATC→ATT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,331 | A→G | T397T (ACT→ACC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,413 | A→G | V370A (GTG→GCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,445 | C→A | L359L (CTG→CTT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,582 | C→G | V314L (GTA→CTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,604 | T→C | L306L (TTA→TTG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,712 | G→T | P270P (CCC→CCA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,744 | A→G | L260L (TTG→CTG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,753 | G→A | L257L (CTG→TTG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,763 | G→A | C253C (TGC→TGT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,777 | G→T | L249I (CTC→ATC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,790 | T→C | A244A (GCA→GCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,853 | C→T | A223A (GCG→GCA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,868 | C→G | G218G (GGG→GGC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,919 | C→T | A201A (GCG→GCA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 73,984 | 2 bp→CG | coding (537‑538/1611 nt) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,009 | T→C | Q171Q (CAA→CAG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,015 | C→T | Q169Q (CAG→CAA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,027 | G→A | I165I (ATC→ATT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,069 | C→T | L151L (CTG→CTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,081 | C→T | V147V (GTG→GTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,084 | A→G | H146H (CAT→CAC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,087 | G→C | A145A (GCC→GCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,204 | G→A | V106V (GTC→GTT) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,209 | A→G | L105L (TTG→CTG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,222 | C→T | L100L (TTG→TTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,234 | A→G | C96C (TGT→TGC) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,308 | T→C | I72V (ATA→GTA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 74,321 | T→C | A67A (GCA→GCG) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 75,707 | C→T | L531L (CTG→CTA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,752 | 2 bp→G | coding (1547‑1548/1656 nt) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,758 | 1 bp→GC | coding (1542/1656 nt) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,767 | C→T | A511A (GCG→GCA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,806 | A→G | N498N (AAT→AAC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,812 | C→T | E496E (GAG→GAA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,830 | A→G | A490A (GCT→GCC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,833 | A→G | A489A (GCT→GCC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,851 | A→G | I483I (ATT→ATC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,854 | G→C | P482P (CCC→CCG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,860 | G→A | C480C (TGC→TGT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,863 | A→G | H479H (CAT→CAC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,869 | T→G | L477L (CTA→CTC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,875 | T→C | P475P (CCA→CCG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,881 | T→C | E473E (GAA→GAG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,887 | T→C | L471L (TTA→TTG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,890 | A→G | H470H (CAT→CAC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,893 | T→C | A469A (GCA→GCG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,899 | A→C | V467V (GTT→GTG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,901 | 2 bp→GC | coding (1398‑1399/1656 nt) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,905 | G→A | F465F (TTC→TTT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,908 | G→A | D464D (GAC→GAT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,920 | G→C | T460T (ACC→ACG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,938 | T→A | L454L (CTA→CTT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,950 | A→G | S450S (AGT→AGC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,953 | T→C | E449E (GAA→GAG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,966 | 2 bp→TC | coding (1333‑1334/1656 nt) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 75,984 | 2 bp→CT | coding (1315‑1316/1656 nt) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,000 | T→C | K434E (AAA→GAA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,082 | T→C | L406L (CTA→CTG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,086 | G→A | T405I (ACC→ATC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,283 | C→T | L339L (CTG→CTA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,334 | G→A | G322G (GGC→GGT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,358 | C→A | G314G (GGG→GGT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,364 | G→A | A312A (GCC→GCT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,478 | A→G | I274I (ATT→ATC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,576 | G→A | L242L (CTG→TTG) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,700 | A→G | D200D (GAT→GAC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,727 | G→A | H191H (CAC→CAT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,775 | A→T | I175I (ATT→ATA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 76,862 | G→A | I146I (ATC→ATT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 77,021 | C→T | L93L (CTG→CTA) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 77,027 | A→G | D91D (GAT→GAC) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 77,117 | G→A | R61R (CGC→CGT) | sgrR ← | DNA‑binding transcriptional dual regulator SgrR |
| RA | 77,478 | G→A | noncoding (112/227 nt) E31K (GAA→AAA) |
sgrS → sgrT → |
small regulatory RNA SgrS PtsG glucose transporter inhibitor |
| RA | 77,776 | C→A | G52G (GGC→GGA) | setA → | sugar exporter SetA |
| RA | 78,406 | A→T | G262G (GGA→GGT) | setA → | sugar exporter SetA |
| RA | 78,520 | C→A | F300L (TTC→TTA) | setA → | sugar exporter SetA |
| RA | 78,524 | A→C | N302H (AAT→CAT) | setA → | sugar exporter SetA |
| RA | 78,533 | A→C | M305L (ATG→CTG) | setA → | sugar exporter SetA |
| RA | 78,576 | G→A | G319D (GGC→GAC) | setA → | sugar exporter SetA |
| RA | 78,714 | G→A | S365N (AGT→AAT) | setA → | sugar exporter SetA |
| RA | 78,761 | G→A | V381I (GTC→ATC) | setA → | sugar exporter SetA |
| RA | 79,040 | A→G | A138A (GCT→GCC) | leuD ← | 3‑isopropylmalate dehydratase subunit LeuD |
| RA | 80,079 | C→T | W262* (TGG→TGA) | leuC ← | 3‑isopropylmalate dehydratase subunit LeuC |
| RA | 80,529 | C→G | G112G (GGG→GGC) | leuC ← | 3‑isopropylmalate dehydratase subunit LeuC |
| RA | 80,934 | C→T | G342D (GGC→GAC) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 82,633 | T→G | I299I (ATA→ATC) | leuA ← | 2‑isopropylmalate synthase |
| RA | 82,894 | T→G | G212G (GGA→GGC) | leuA ← | 2‑isopropylmalate synthase |
| RA | 82,909 | C→T | L207L (TTG→TTA) | leuA ← | 2‑isopropylmalate synthase |
| RA | 82,933 | G→A | I199I (ATC→ATT) | leuA ← | 2‑isopropylmalate synthase |
| RA | 82,957 | C→T | V191V (GTG→GTA) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,179 | C→T | E117E (GAG→GAA) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,182 | G→A | D116D (GAC→GAT) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,296 | T→C | E78E (GAA→GAG) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,317 | A→G | C71C (TGT→TGC) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,344 | G→A | A62A (GCC→GCT) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,359 | C→T | S57S (TCG→TCA) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,371 | G→A | G53G (GGC→GGT) | leuA ← | 2‑isopropylmalate synthase |
| RA | 83,383 | G→A | V49V (GTC→GTT) | leuA ← | 2‑isopropylmalate synthase |
| RA | 84,251 | G→T | intergenic (‑543/‑117) | leuL ← / → leuO | leu operon leader peptide/DNA‑binding transcriptional dual regulator LeuO |
| RA | 84,267 | G→C | intergenic (‑559/‑101) | leuL ← / → leuO | leu operon leader peptide/DNA‑binding transcriptional dual regulator LeuO |
| RA | 84,305 | 2 bp→CG | intergenic (‑597/‑62) | leuL ← / → leuO | leu operon leader peptide/DNA‑binding transcriptional dual regulator LeuO |
| RA | 84,415 | A→G | K16K (AAA→AAG) | leuO → | DNA‑binding transcriptional dual regulator LeuO |
| RA | 85,481 | T→C | R11G (AGA→GGA) | yabR ← | protein YabR |
| RA | 86,241 | A→G | V204V (GTA→GTG) | ilvI → | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| RA | 86,271 | C→T | G214G (GGC→GGT) | ilvI → | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| RA | 86,315 | C→T | T229M (ACG→ATG) | ilvI → | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| RA | 86,345 | G→C | C239S (TGC→TCC) | ilvI → | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| RA | 86,658 | A→G | P343P (CCA→CCG) | ilvI → | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| RA | 87,410 | C→T | R18R (CGC→CGT) | ilvH → | acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit |
| RA | 89,089 | C→A | intergenic (+57/‑545) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,103 | G→C | intergenic (+71/‑531) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,143 | A→G | intergenic (+111/‑491) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,145 | G→T | intergenic (+113/‑489) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,239 | G→A | intergenic (+207/‑395) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,241 | C→A | intergenic (+209/‑393) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,263 | A→G | intergenic (+231/‑371) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,316 | T→C | intergenic (+284/‑318) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,321 | A→G | intergenic (+289/‑313) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,471 | T→G | intergenic (+439/‑163) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,570 | A→C | intergenic (+538/‑64) | cra → / → mraZ | DNA‑binding transcriptional dual regulator Cra/DNA‑binding transcriptional repressor MraZ |
| RA | 89,699 | T→C | Y22Y (TAT→TAC) | mraZ → | DNA‑binding transcriptional repressor MraZ |
| RA | 89,754 | T→C | Y41H (TAT→CAT) | mraZ → | DNA‑binding transcriptional repressor MraZ |
| RA | 90,432 | A→G | E113E (GAA→GAG) | rsmH → | 16S rRNA m(4)C1402 methyltransferase |
| RA | 90,435 | T→C | R114R (CGT→CGC) | rsmH → | 16S rRNA m(4)C1402 methyltransferase |
| RA | 91,904 | G→A | E164E (GAG→GAA) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 91,916 | C→T | Y168Y (TAC→TAT) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 91,922 | G→A | P170P (CCG→CCA) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 91,949 | C→T | I179I (ATC→ATT) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,096 | A→T | A228A (GCA→GCT) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,162 | C→T | N250N (AAC→AAT) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,327 | G→T | P305P (CCG→CCT) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,354 | A→G | V314V (GTA→GTG) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,687 | A→G | P425P (CCA→CCG) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,810 | T→C | T466T (ACT→ACC) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 92,843 | A→G | P477P (CCA→CCG) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| RA | 93,384 | T→C | D73D (GAT→GAC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,438 | C→T | N91N (AAC→AAT) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,501 | G→A | V112V (GTG→GTA) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,544 | T→C | L127L (TTG→CTG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,575 | T→C | I137T (ATC→ACC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,639 | A→C | T158T (ACA→ACC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,672 | G→T | L169L (CTG→CTT) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,780 | C→G | T205T (ACC→ACG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,960 | T→C | I265I (ATT→ATC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,987 | G→A | L274L (TTG→TTA) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,995 | C→A | T277N (ACC→AAC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 93,999 | A→C | E278D (GAA→GAC) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 94,065 | A→G | E300E (GAA→GAG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 94,141 | C→T | L326L (CTG→TTG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 94,153 | C→T | L330L (CTG→TTG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 95,905 | T→C | L419S (TTA→TCA) | murF → | D‑alanyl‑D‑alanine‑adding enzyme |
| RA | 100,956 | T→A | G64G (GGT→GGA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,055 | C→A | A97A (GCC→GCA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,139 | C→A | A125A (GCC→GCA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,430 | G→T | P222P (CCG→CCT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,496 | G→A | G244G (GGG→GGA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,688 | C→A | G308G (GGC→GGA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,694 | C→T | D310D (GAC→GAT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,709 | G→A | L315L (TTG→TTA) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,712 | G→T | R316R (CGG→CGT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,718 | T→G | L318L (CTT→CTG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,721 | A→G | E319E (GAA→GAG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,739 | T→G | G325G (GGT→GGG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,802 | A→G | A346A (GCA→GCG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,806 | C→T | L348L (CTG→TTG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,850 | C→T | T362T (ACC→ACT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 101,865 | C→T | R367R (CGC→CGT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 102,090 | T→C | D442D (GAT→GAC) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 102,093 | G→T | P443P (CCG→CCT) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 102,098 | G→A | R445Q (CGG→CAG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 102,168 | T→C | I468I (ATT→ATC) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 102,262 | T→C | G10G (GGT→GGC) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,268 | C→T | T12T (ACC→ACT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,319 | A→G | G29G (GGA→GGG) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,340 | C→T | D36D (GAC→GAT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,394 | C→T | G54G (GGC→GGT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,454 | G→C | G74G (GGG→GGC) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,487 | A→C | G85G (GGA→GGC) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,538 | T→G | L102L (CTT→CTG) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,541 | A→G | L103L (CTA→CTG) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 102,813 | G→A | G194D (GGT→GAT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 103,184 | C→T | N10N (AAC→AAT) | ftsQ → | cell division protein FtsQ |
| RA | 103,361 | A→G | T69T (ACA→ACG) | ftsQ → | cell division protein FtsQ |
| RA | 103,562 | T→C | H136H (CAT→CAC) | ftsQ → | cell division protein FtsQ |
| RA | 103,583 | T→C | N143N (AAT→AAC) | ftsQ → | cell division protein FtsQ |
| RA | 103,604 | A→T | E150D (GAA→GAT) | ftsQ → | cell division protein FtsQ |
| RA | 103,655 | C→T | A167A (GCC→GCT) | ftsQ → | cell division protein FtsQ |
| RA | 104,167 | A→G | Q62Q (CAA→CAG) | ftsA → | cell division protein FtsA |
| RA | 104,242 | C→T | H87H (CAC→CAT) | ftsA → | cell division protein FtsA |
| RA | 104,293 | G→A | V104V (GTG→GTA) | ftsA → | cell division protein FtsA |
| RA | 112,836 | A→C | L128L (CTT→CTG) | coaE ← | dephospho‑CoA kinase |
| RA | 114,344 | G→A | V301I (GTT→ATT) | guaC → | GMP reductase |
| RA | 115,497 | C→T | T76T (ACG→ACA) | hofC ← | inner membrane protein HofC |
| RA | 144,375 | C→A | P225Q (CCG→CAG) | yadH → | putative ABC transporter membrane subunit YadH |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| MC JC | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| RA | 339,935 | C→T | A56V (GCC→GTC) | yahH → | putative uncharacterized protein YahH |
| RA | 339,941 | C→T | T58I (ACT→ATT) | yahH → | putative uncharacterized protein YahH |
| RA | 339,958 | G→A | D64N (GAC→AAC) | yahH → | putative uncharacterized protein YahH |
| RA | 361,896 | G→A | intergenic (‑36/+30) | lacA ← / ← lacY | galactoside O‑acetyltransferase/lactose permease |
| RA | 363,406 | 2 bp→CA | coding (2899‑2900/3075 nt) | lacZ ← | beta‑galactosidase |
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| JC JC | 578,072 | IS2 (+) +5 bp | coding (460‑464/498 nt) | rrrD → | lysozyme |
| JC JC | 607,765 | IS150 (+) +3 bp | noncoding (26‑28/60 nt) | sokE ← | small RNA SokE |
| RA | 653,880 | C→T | P549L (CCT→CTT) L7L (CTA→TTA) |
dpiB → dpiA → |
sensor histidine kinase DpiB DNA‑binding transcriptional dual regulator DpiA |
| MC JC | 686,186 | Δ1,665 bp | IS5‑mediated | [gltJ]–gltI | [gltJ], sroC, gltI |
| RA | 934,918 | C→T | A565A (GCC→GCT) | ftsK → | cell division DNA translocase FtsK |
| JC JC | 981,494 | IS150 (+) +4 bp | coding (448‑451/1848 nt) | ldtD → | L,D‑transpeptidase LdtD |
| RA | 987,152 | G→T | intergenic (‑170/+433) | ompF ← / ← asnS | outer membrane porin F/asparagine‑‑tRNA ligase |
| RA | 1,072,769 | G→A | P32L (CCA→CTA) | rutB ← | ureidoacrylate amidohydrolase |
| RA | 1,073,380 | G→A | A211V (GCT→GTT) | rutA ← | pyrimidine monooxygenase RutA |
| RA | 1,076,823 | G→A | A687V (GCG→GTG) | putA ← | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| RA | 1,077,995 | A→G | D296D (GAT→GAC) | putA ← | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| JC JC | 1,105,376 | IS2 (–) +5 bp | intergenic (+83/‑34) | csgC → / → ymdA | curlin chaperone/uncharacterized protein YmdA |
| RA | 1,111,150 | C→T | T96T (ACC→ACT) | opgH → | osmoregulated periplasmic glucans biosynthesis protein H |
| RA | 1,159,064 | G→A | S399N (AGC→AAC) | ptsG → | glucose‑specific PTS enzyme IIBC component |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,267,390 | C→T | A24V (GCA→GTA) | ychA → | transglutaminase‑like/TPR repeat‑containing protein |
| RA | 1,267,397 | C→T | R26R (CGC→CGT) | ychA → | transglutaminase‑like/TPR repeat‑containing protein |
| MC JC | 1,299,499 | Δ1,199 bp | insH21 | insH21 | |
| JC JC | 1,303,274 | IS150 (+) +3 bp | coding (376‑378/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| RA | 1,317,195 | G→A | Q10* (CAG→TAG) | trpA ← | tryptophan synthase subunit alpha |
| MC JC | 1,322,259 | Δ24 bp | coding (665‑688/1563 nt) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| MC JC | 1,371,456 | Δ24,588 bp | IS5‑mediated | [ycjM]–ynaI | 23 genes [ycjM], ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI |
| MC JC | 1,411,925 | Δ23,060 bp | [ttcA]–ynaM | 34 genes [ttcA], intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM |
|
| RA | 1,440,262 | C→T | E175K (GAA→AAA) | ydbK ← | putative pyruvate‑flavodoxin oxidoreductase |
| RA | 1,629,122 | G→A | intergenic (+84/‑93) | rspR → / → ydfZ | DNA‑binding transcriptional repressor RspR/putative selenoprotein YdfZ |
| JC JC | 1,631,478 | IS2 (+) +5 bp | coding (804‑808/1284 nt) | ydfJ ← | putative transporter YdfJ |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,667,887 | Δ1 bp | coding (678/1221 nt) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| JC JC | 1,907,392 | IS5 (+) +4 bp | coding (41‑44/210 nt) | cspC ← | transcription antiterminator and regulator of mRNA stability CspC |
| RA | 1,992,055 | G→A | noncoding (63/76 nt) | glyW ← | tRNA‑Gly |
| RA | 2,003,355 | T→G | E84D (GAA→GAC) | fliC ← | flagellar filament structural protein |
| JC JC | 2,020,325 | IS150 (+) +4 bp | coding (239‑242/1005 nt) | fliM → | flagellar motor switch protein FliM |
| RA | 2,032,423 | G→A | V219V (GTC→GTT) | yedJ ← | putative HD superfamily phosphohydrolase YedJ |
| RA | 2,090,450 | C→T | Q87* (CAG→TAG) | hisG → | ATP phosphoribosyltransferase |
| JC JC | 2,174,844 | IS5 (–) +4 bp | coding (203‑206/453 nt) | gatA ← | galactitol‑specific PTS enzyme IIA component |
| RA | 2,214,086 | C→T | A187T (GCG→ACG) | btsS ← | high‑affinity pyruvate receptor |
| RA | 2,312,867 | G→T | intergenic (‑118/‑217) | ompC ← / → micF | outer membrane porin C/small regulatory RNA MicF |
| JC JC | 2,406,780 | IS1 (–) +8 bp | intergenic (‑139/‑774) | lrhA ← / → alaA | DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA |
| RA | 2,415,148 | C→T | I134I (ATC→ATT) | pta → | phosphate acetyltransferase |
| JC JC | 2,428,738 | IS150 (+) +3 bp | coding (1499‑1501/1518 nt) | purF ← | amidophosphoribosyltransferase |
| RA | 2,557,960 | C→T | P240P (CCG→CCA) | eutB ← | ethanolamine ammonia‑lyase subunit alpha |
| RA | 2,575,086 | C→T | M124I (ATG→ATA) | eutP ← | putative ethanolamine utilization acetate kinase EutP |
| RA | 2,782,445 | C→T | V94V (GTG→GTA) | ypjA ← | adhesin‑like autotransporter YpjA |
| RA | 2,795,274 | C→T | S341F (TCC→TTC) | gabP → | 4‑aminobutanoate:H(+) symporter |
| RA | 2,796,500 | C→T | S96N (AGC→AAC) | kbp ← | K(+) binding protein |
| RA | 2,808,288 | C→T | intergenic (+164/‑1329) | proX → / → ygaZ | glycine betaine ABC transporter periplasmic binding protein ProX/L‑valine exporter, YgaZ component |
| RA | 2,867,453 | C→A | Q33Y (CAG→TAT) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,867,455 | G→A | Q33Y (CAG→TAT) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,868,129 | A→T | Y209N (TAT→AAT) | nlpD ← | murein hydrolase activator NlpD |
| MC JC | 2,965,087 | (TCCGGT)2→1 | coding (64‑69/795 nt) | thyA ← | thymidylate synthase |
| RA | 3,074,411 | C→T | A93A (GCG→GCA) | yggC ← | P‑loop NTPase domain‑containing protein YggC |
| RA | 3,169,090 | G→A | P48S (CCT→TCT) | ygiV ← | DNA‑binding transcriptional repressor YgiV |
| RA | 3,169,959 | T→C | P44P (CCT→CCC) | qseB → | DNA‑binding transcriptional activator QseB |
| RA | 3,232,504 | C→T | V280V (GTC→GTT) | fadH → | 2,4‑dienoyl‑CoA reductase |
| JC JC | 3,261,879 | IS2 (–) +5 bp | coding (536‑540/2295 nt) | tdcE ← | 2‑ketobutyrate formate‑lyase/pyruvate formate‑lyase 4 |
| RA | 3,275,149 | C→T | intergenic (‑242/‑133) | garP ← / → garD | galactarate/D‑glucarate transporter GarP/GarD |
| RA | 3,337,100 | C→T | G53R (GGG→AGG) | mlaB ← | intermembrane phospholipid transport system protein MlaB |
| RA | 3,353,333 | C→T | D240N (GAT→AAT) | yhcC ← | radical SAM family oxidoreductase YhcC |
| RA | 3,387,640 | C→T | L183L (TTG→TTA) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,413,797 | C→T | intergenic (‑332/‑67) | envR ← / → acrE | DNA‑binding transcriptional repressor EnvR/multidrug efflux pump membrane fusion lipoprotein AcrE |
| RA | 3,418,078 | C→T | L1016L (CTG→TTG) | acrF → | multidrug efflux pump RND permease AcrF |
| RA | 3,421,491 | C→T | A56V (GCA→GTA) | yhdY → | putative ABC transporter membrane subunit YhdY |
| RA | 3,474,290 | T→C | K88R (AAA→AGA) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,486,205 | C→A | T29K (ACG→AAG) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,534,456 | G→T | intergenic (+16/+60) | pck → / ← envZ | phosphoenolpyruvate carboxykinase (ATP)/sensor histidine kinase EnvZ |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,576,993 | C→T | K23K (AAG→AAA) | gntU ← | low‑affinity gluconate transporter |
| RA | 3,579,438 | C→T | E70K (GAA→AAA) | yhhW ← | quercetin 2,3‑dioxygenase |
| RA | 3,580,827 | G→A | intergenic (‑22/+95) | yhhX ← / ← ryhB | putative oxidoreductase YhhX/small regulatory RNA RyhB |
| RA | 3,592,220 | C→T | E36K (GAA→AAA) | ugpB ← | sn‑glycerol 3‑phosphate ABC transporter periplasmic binding protein |
| RA | 3,607,131 | C→T | G227G (GGC→GGT) | zntA → | Zn(2(+))/Cd(2(+))/Pb(2(+)) exporting P‑type ATPase |
| RA | 3,623,183 | C→T | P1331L (CCT→CTT) | rhsB → | rhs element protein RhsB |
| RA | 3,640,196 | C→T | P29L (CCC→CTC) | uspA → | universal stress protein A |
| RA | 3,679,490 | C→T | R24R (CGC→CGT) | kdgK → | 2‑dehydro‑3‑deoxygluconokinase |
| MC JC | 3,682,261 | Δ34 bp | coding (1154‑1187/1287 nt) | dctA ← | C4 dicarboxylate/orotate:H(+) symporter |
| RA | 3,690,153 | T→A | S37C (AGT→TGT) | bcsZ ← | endo‑1,4‑D‑glucanase |
| RA | 3,725,607 | G→A | R36C (CGT→TGT) | ysaB ← | putative lipoprotein YsaB |
| JC JC | 3,737,137 | IS2 (+) +5 bp | coding (37‑41/825 nt) | bax ← | putative glycoside hydrolase Bax |
| RA | 3,749,371 | G→A | R47H (CGT→CAT) | sgbU → | putative L‑xylulose 5‑phosphate 3‑epimerase |
| RA | 3,752,017 | G→A | R9Q (CGG→CAG) | yiaU → | putative DNA‑binding transcriptional regulator YiaU |
| RA | 3,792,377 | G→A | P59S (CCT→TCT) | kbl ← | 2‑amino‑3‑ketobutyrate CoA ligase |
| RA | 3,792,654 | G→A | intergenic (‑103/+172) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| RA | 3,816,348 | G→A | R68C (CGT→TGT) | rph ← | truncated RNase PH |
| RA | 3,833,152 | G→A | V462V (GTC→GTT) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| RA | 3,837,139 | G→A | G63R (GGA→AGA) | setC → | putative arabinose exporter |
| RA | 3,846,193 | G→A | R325R (CGC→CGT) | uhpT ← | hexose‑6‑phosphate:phosphate antiporter |
| RA | 3,857,720 | G→A | H229Y (CAC→TAC) | yidJ ← | putative sulfatase/phosphatase YidJ |
| RA | 3,863,644 | G→A | intergenic (‑41/‑255) | glvC ← / → yidP | putative PTS enzyme II component GlvC/putative DNA‑binding transcriptional regulator YidP |
| RA | 3,881,475 | G→A | L283F (CTT→TTT) | dnaN ← | beta sliding clamp |
| RA | 3,890,942 | T→C | L236P (CTG→CCG) | tnaB → | tryptophan:H(+) symporter TnaB |
| RA | 3,906,485 | C→T | G28E (GGG→GAG) | bglG ← | transcriptional antiterminator BglG |
| RA | 3,953,790 | G→A | E105K (GAG→AAG) | ilvD → | dihydroxy‑acid dehydratase |
| RA | 3,961,774 | C→T | R366R (CGC→CGT) | rep → | ATP‑dependent DNA helicase Rep |
| RA | 3,963,926 | C→T | E102K (GAA→AAA) | gpp ← | guanosine‑5'‑triphosphate,3'‑diphosphate phosphatase |
| RA | 4,017,742 | G→A | S137N (AGT→AAT) | rmuC → | putative recombination limiting protein RmuC |
| RA | 4,020,016 | C→T | A131A (GCC→GCT) noncoding (39/252 nt) |
ubiJ → esrE → |
ubiquinone biosynthesis accessory factor UbiJ small RNA EsrE |
| RA | 4,022,629 | C→T | P138S (CCG→TCG) | tatB → | twin arginine protein translocation system ‑ TatB protein |
| RA | 4,025,066 | C→T | L27F (CTC→TTC) | ubiD → | 3‑octaprenyl‑4‑hydroxybenzoate decarboxylase |
| RA | 4,029,625 | C→T | M449I (ATG→ATA) | fadB ← | multifunctional enoyl‑CoA hydratase, 3‑hydroxyacyl‑CoA epimerase, Delta(3)‑cis‑ Delta(2)‑trans‑enoyl‑CoA isomerase, L‑3‑hydroxyacyl‑CoA dehydrogenase |
| RA | 4,035,747 | C→T | noncoding (217/1542 nt) | rrsA → | 16S ribosomal RNA |
| RA | 4,051,338 | C→T | intergenic (+57/‑9) | csrC → / → yihI | small regulatory RNA CsrC/Der GTPase‑activating protein YihI |
| RA | 4,056,803 | A→G | V411A (GTT→GCT) | glnA ← | glutamine synthetase |
| RA | 4,061,577 | G→A | R138Q (CGG→CAG) | yihM → | putative TIM barrel domain‑containing protein YihM |
| RA | 4,065,058 | G→A | P237S (CCA→TCA) | yihO ← | putative sulfoquinovose transporter |
| RA | 4,065,403 | G→A | L122L (CTG→TTG) | yihO ← | putative sulfoquinovose transporter |
| RA | 4,084,081 | G→A | T581I (ACC→ATC) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,098,673 | G→A | D10N (GAT→AAT) | rhaR → | DNA‑binding transcriptional activator RhaR |
| RA | 4,112,913 | G→A | intergenic (+158/‑54) | yiiR → / → yiiS | DUF805 domain‑containing protein YiiR/DUF406 domain‑containing protein YiiS |
| RA | 4,120,106 | G→A | L82L (CTA→TTA) | menA ← | 1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase |
| MC JC | 4,124,266 | Δ103 bp | coding (89‑191/1026 nt) | cytR ← | DNA‑binding transcriptional repressor CytR |
| RA | 4,128,813 | Δ2 bp | coding (142‑143/1161 nt) | metB → | O‑succinylhomoserine(thiol)‑lyase/O‑ succinylhomoserine lyase |
| RA | 4,156,839 | G→A | intergenic (+50/‑11) | argB → / → argH | acetylglutamate kinase/argininosuccinate lyase |
| RA | 4,157,116 | Δ1 bp | coding (267/1374 nt) | argH → | argininosuccinate lyase |
| RA | 4,182,820 | C→T | H526Y (CAC→TAC) | rpoB → | RNA polymerase subunit beta |
| RA | 4,182,847 | C→T | P535S (CCA→TCA) | rpoB → | RNA polymerase subunit beta |
| RA | 4,193,471 | G→A | L36L (CTG→TTG) | thiF ← | sulfur carrier protein ThiS adenylyltransferase |
| RA | 4,198,187 | G→A | G158S (GGC→AGC) | hemE → | uroporphyrinogen decarboxylase |
| RA | 4,283,464 | G→A | P480L (CCG→CTG) | actP ← | acetate/glycolate:cation symporter |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,317,695 | G→A | I67I (ATC→ATT) | phnL ← | methylphosphonate degradation complex subunit PhnL |
| RA | 4,392,024 | G→A | A141T (GCG→ACG) | orn → | oligoribonuclease |
| JC JC | 4,430,711 | IS150 (–) +3 bp | coding (848‑850/1413 nt) | cycA → | D‑serine/alanine/glycine/:H(+)symporter |
| RA | 4,449,271 | G→A | P128S (CCT→TCT) | ppa ← | inorganic pyrophosphatase |
| RA | 4,459,147 | G→A | V397I (GTA→ATA) | tldE → | metalloprotease subunit TldE |
| RA | 4,483,436 | G→A | N134N (AAC→AAT) | valS ← | valine‑‑tRNA ligase |
| RA | 4,538,839 | G→A | G221G (GGC→GGT) | nanC ← | N‑acetylneuraminate outer membrane channel |
| RA | 4,543,590 | G→A | R159H (CGT→CAT) | fimA → | type 1 fimbriae major subunit |
| RA | 4,546,005 | A→G | I304V (ATT→GTT) | fimD → | type I fimbriae usher protein |
| RA | 4,572,893 | C→T | I160I (ATC→ATT) | yjiT → | putative uncharacterized protein YjiT |
| RA | 4,573,171 | T→C | L253P (CTG→CCG) | yjiT → | putative uncharacterized protein YjiT |
| RA | 4,606,552 | G→A | intergenic (‑151/+117) | leuQ ← / ← rsmC | tRNA‑Leu/16S rRNA m(2)G1207 methyltransferase |
| RA | 4,617,364 | G→A | L14L (TTG→TTA) | deoC → | deoxyribose‑phosphate aldolase |
| RA | 4,620,528 | G→A | W309* (TGG→TAG) | deoB → | phosphopentomutase |
| MC JC | 4,628,621 | Δ6,226 bp | ettA–[rob] | ettA, slt, trpR, yjjX, ytjC, [rob] | |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196277 | 1211480 | 15204 | 29 [23] | [27] 28 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 1492145 | 1496009 | 3865 | 81 [0] | [0] 101 | [sokB]–[ydcJ] | [sokB],trg,ydcI,[ydcJ] |
| * | * | ÷ | NC_000913 | 1978495 | 1979270 | 776 | 112 [0] | [0] 131 | insB5–insA5 | insB5,insA5 |
| * | * | ÷ | NC_000913 | 2101962–2102946 | 2174843 | 71898–72882 | 30 [27] | [3] 80 | [insH7]–[gatA] | [insH7],wbbL,wbbK,wbbJ,wbbI,wbbH,glf,rfbX,rfbC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,cpsG,cpsB,wcaI,gmm,fcl,gmd,wcaF,wcaE,wcaD,wcaC,wcaB,wcaA,wzc,wzb,wza,yegH,asmA,dcd,udk,dgcE,alkA,yegD,yegI,yegJ,pphC,yegL,sibA,ibsA,sibB,ibsB,mdtA,mdtB,mdtC,mdtD,baeS,baeR,yegP,trhP,cyaR,ogrK,yegR,yegS,gatR,insE5,insF5,gatR,gatD,gatB,[gatA] |
| * | * | ÷ | NC_000913 | 3013690 | 3013860 | 171 | 92 [0] | [1] 110 | yqeB | XdhC‑CoxI family protein YqeB |
| * | * | ÷ | NC_000913 | 3423885–3424460 | 3424460 | 1–576 | 30 [27] | [27] 28 | rrlD | 23S ribosomal RNA |
| * | * | ÷ | NC_000913 | 4574146 | 4598921 | 24776 | 115 [0] | [0] 84 | mcrC–[opgB] | mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,[opgB] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 16974 = | 27 (0.280) | 87 (0.910) | 53/598 | 0.5 | 76.3% | noncoding (23/59 nt) | sokC | small regulatory RNA antitoxin SokC |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 16976 | 30 (0.320) | 57 (0.600) | 42/592 | 1.0 | 65.6% | noncoding (25/59 nt) | sokC | small regulatory RNA antitoxin SokC |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 381260 = | NA (NA) | 103 (1.080) | 66/598 | 0.2 | NA | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 382183 | NA (NA) | noncoding (924/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 604667 | 51 (0.540) | 30 (0.320) | 26/596 | 2.4 | 37.0% | intergenic (‑4/+104) | ybdG/nfsB | miniconductance mechanosensitive channel YbdG/NAD(P)H‑dependent nitroreductase NfsB |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 1034134 = | 19 (0.200) | 61 (0.640) | 43/594 | 0.9 | 76.2% | coding (881/1794 nt) | hyaB | hydrogenase 1 large subunit |
| ? | NC_000913 | 1469296 = | NA (NA) | noncoding (1/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | = 1034135 | 19 (0.200) | 65 (0.680) | 48/598 | 0.7 | 77.4% | coding (882/1794 nt) | hyaB | hydrogenase 1 large subunit |
| ? | NC_000913 | = 1470516 | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | = 1121461 | 58 (0.610) | 26 (0.270) | 23/596 | 2.8 | 30.9% | coding (27/246 nt) | dinI | DNA damage‑inducible protein I |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 112 (1.180) | 73/598 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1978494 | 0 (0.000) | intergenic (‑297/+24) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB | |||||
| * | ? | NC_000913 | = 1492144 | 0 (0.000) | 81 (0.860) | 53/592 | 0.5 | 100% | noncoding (26/57 nt) | sokB | putative small regulatory RNA antitoxin SokB |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 1496010 = | 0 (0.000) | 101 (1.060) | 70/596 | 0.1 | 100% | coding (723/1344 nt) | ydcJ | DUF1338 domain‑containing protein YdcJ |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 1979271 = | 0 (0.000) | 131 (1.380) | 85/598 | 0.0 | 100% | intergenic (‑56/‑482) | insA5/uspC | IS1 family protein InsA/universal stress protein C |
| ? | NC_000913 | = 2102947 | NA (NA) | pseudogene (443/446 nt) | wbbL | interrupted rhamnosyltransferase WbbL | |||||
| * | ? | NC_000913 | 2068941 = | NA (NA) | 32 (0.340) | 27/598 | 2.2 | 22.9% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2476192 = | 108 (1.130) | coding (99/141 nt) | ypdJ | putative uncharacterized protein YpdJ | |||||
| * | ? | NC_000913 | = 2070271 | NA (NA) | 36 (0.380) | 25/598 | 2.5 | 24.7% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 2476196 | 110 (1.150) | coding (103/141 nt) | ypdJ | putative uncharacterized protein YpdJ | |||||
| * | ? | NC_000913 | 2090129 = | 57 (0.600) | 27 (0.280) | 24/598 | 2.6 | 32.1% | intergenic (+83/‑63) | hisL/hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 2090131 | 58 (0.610) | 31 (0.330) | 24/598 | 2.6 | 34.8% | intergenic (+85/‑61) | hisL/hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 2739492 | 92 (0.970) | 33 (0.350) | 30/596 | 1.9 | 26.5% | coding (578/1122 nt) | tyrA | fused chorismate mutase/prephenate dehydrogenase |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 3013689 | 0 (0.000) | 92 (0.970) | 66/598 | 0.2 | 100% | coding (551/1626 nt) | yqeB | XdhC‑CoxI family protein YqeB |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 3013861 = | 0 (0.000) | 108 (1.140) | 81/594 | 0.0 | 100% | coding (379/1626 nt) | yqeB | XdhC‑CoxI family protein YqeB |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 3349498 = | 34 (0.360) | 67 (0.700) | 49/598 | 0.6 | 66.3% | coding (312/729 nt) | mtgA | peptidoglycan glycosyltransferase MtgA |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 3349500 | 37 (0.390) | 88 (0.920) | 54/598 | 0.5 | 70.4% | coding (310/729 nt) | mtgA | peptidoglycan glycosyltransferase MtgA |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | 3720633 = | NA (NA) | 34 (0.360) | 30/594 | 1.9 | 31.2% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 4548772 = | 75 (0.790) | coding (488/504 nt) | fimG | type 1 fimbriae minor subunit FimG | |||||
| * | ? | NC_000913 | 3720633 = | NA (NA) | 113 (1.190) | 79/596 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | = 4574145 | 0 (0.000) | intergenic (+214/+2767) | yjiT/mcrC | putative uncharacterized protein YjiT/Type IV methyl‑directed restriction enzyme EcoKMcrBC subunit | |||||
| * | ? | NC_000913 | = 3722075 | NA (NA) | 34 (0.360) | 27/596 | 2.2 | 30.1% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | = 4548775 | 79 (0.830) | coding (491/504 nt) | fimG | type 1 fimbriae minor subunit FimG | |||||
| * | ? | NC_000913 | = 3722075 | NA (NA) | 83 (0.870) | 56/598 | 0.4 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 4598922 = | 0 (0.000) | coding (520/2292 nt) | opgB | phosphoglycerol transferase I | |||||