mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 71,170 | T→C | S262P (TCG→CCG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 154,182 | C→T | L415L (CTG→CTA) | htrE ← | putative fimbrial usher protein HtrE |
| RA | 156,068 | A→G | V45A (GTA→GCA) | yadV ← | putative fimbrial chaperone YadV |
| MC JC | 260,173 | Δ13,782 bp | IS5‑mediated | proB–[ykfC] | 19 genes proB, proA, thrW, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, yafZ, ykfA, perR, insN, insI1, insN, eyeA, [ykfC] |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 298,885 | G→A | P684S (CCG→TCG) | paoC ← | aldehyde dehydrogenase: molybdenum cofactor‑binding subunit |
| RA | 365,306 | G→A | R334C (CGC→TGC) | lacZ ← | beta‑galactosidase |
| RA | 414,163 | G→A | R531* (CGA→TGA) | sbcC ← | ATP‑dependent structure‑specific DNA nuclease ‑ SbcC subunit |
| RA | 416,276 | G→A | A226V (GCA→GTA) | sbcD ← | ATP‑dependent structure‑specific DNA nuclease ‑ SbcD subunit |
| RA | 421,027 | C→T | R14R (CGC→CGT) | proY → | putative transporter ProY |
| RA | 472,849 | A→G | G84G (GGA→GGG) | glnK → | nitrogen regulatory protein PII‑2 |
| RA | 495,622 | C→T | T168I (ACC→ATC) | htpG → | chaperone protein HtpG |
| RA | 495,680 | C→T | F187F (TTC→TTT) | htpG → | chaperone protein HtpG |
| RA | 537,024 | C→T | P147S (CCG→TCG) | glxR → | tartronate semialdehyde reductase 2 |
| RA | 579,099 | (A)5→4 | intergenic (‑206/+85) | borD ← / ← ybcV | prophage lipoprotein BorD/DUF1398 domain‑containing protein YbcV |
| RA | 579,127 | T→C | intergenic (‑234/+57) | borD ← / ← ybcV | prophage lipoprotein BorD/DUF1398 domain‑containing protein YbcV |
| RA | 579,134 | T→C | intergenic (‑241/+50) | borD ← / ← ybcV | prophage lipoprotein BorD/DUF1398 domain‑containing protein YbcV |
| RA | 582,597 | C→T | intergenic (+500/‑278) | tfaD → / → tfaX | putative tail fiber assembly protein TfaD/protein TfaX |
| RA | 627,348 | G→A | V427M (GTG→ATG) | entE → | 2,3‑dihydroxybenzoate‑AMP ligase |
| RA | 721,604 | G→A | R44C (CGT→TGT) | kdpE ← | DNA‑binding transcriptional activator KdpE |
| JC JC | 820,914 | IS5 (+) +4 bp | coding (122‑125/714 nt) | ybhM → | Bax1‑I family protein YbhM |
| RA | 883,396 | C→T | intergenic (‑8/‑277) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| JC JC | 1,105,699 | IS1 (+) +9 bp | coding (286‑294/312 nt) | ymdA → | uncharacterized protein YmdA |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| JC JC | 1,196,827 | IS5 (–) +4 bp | intergenic (+45/+37) | C0293 → / ← ymfD | small regulatory RNA C0293/putative SAM‑dependent methyltransferase YmfD |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,517,587 | 2 bp→TT | intergenic (+25/‑60) | ortT → / → ydcY | orphan toxin OrtT/DUF2526 domain‑containing protein YdcY |
| RA | 1,591,711 | C→A | E156* (GAG→TAG) | hipA ← | serine/threonine‑protein kinase toxin HipA |
| RA | 1,600,081 | C→T | W43* (TGG→TGA) | lsrK ← | autoinducer‑2 kinase |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,667,460 | G→A | Q369* (CAG→TAG) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| RA | 1,712,919 | C→T | Q51* (CAA→TAA) | dtpA → | dipeptide/tripeptide:H(+) symporter DtpA |
| RA | 1,792,541 | C→T | G64E (GGA→GAA) | nlpC ← | NlpC/P60 family lipoprotein NlpC |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,977,360 | G→T | P162Q (CCG→CAG) | flhC ← | DNA‑binding transcriptional dual regulator FlhC |
| RA | 2,023,559 | A→G | T223A (ACT→GCT) | fliR → | flagellar biosynthesis protein FliR |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,083,303 | C→T | A183V (GCG→GTG) | sbcB → | exodeoxyribonuclease I |
| RA | 2,090,780 | C→T | Q197* (CAA→TAA) | hisG → | ATP phosphoribosyltransferase |
| RA | 2,104,024 | G→T | I162I (ATC→ATA) | wbbK ← | putative glycosyltransferase WbbK |
| RA | 2,111,259 | Δ1 bp | coding (718/900 nt) | rfbD ← | dTDP‑4‑dehydrorhamnose reductase |
| RA | 2,120,969 | G→A | L196L (CTG→TTG) | wcaJ ← | UDP‑glucose:undecaprenyl‑phosphate glucose‑1‑phosphate transferase |
| RA | 2,173,363 | Δ2 bp | intergenic (‑490/+918) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,173,448 | C→T | intergenic (‑575/+834) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,233,609 | C→T | Q4* (CAG→TAG) | yeiS → | DUF2542 domain‑containing protein YeiS |
| JC JC | 2,239,316 | IS5 (–) +4 bp | intergenic (‑27/+31) | mglA ← / ← mglB | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit/D‑galactose/methyl‑galactoside ABC transporter periplasmic binding protein |
| RA | 2,481,608 | A→G | L190S (TTA→TCA) | emrY ← | tripartite efflux pump membrane subunit EmrY |
| RA | 2,520,199 | A→G | G158G (GGT→GGC) | gltX ← | glutamate‑‑tRNA ligase |
| RA | 2,710,250 | G→A | intergenic (‑86/‑170) | rseD ← / → nadB | rpoE leader peptide/L‑aspartate oxidase |
| RA | 2,745,600 | A→G | Y107H (TAC→CAC) | rimM ← | ribosome maturation factor RimM |
| RA | 2,774,947 | G→A | G544S (GGT→AGT) | yfjW → | uncharacterized protein YfjW |
| RA | 2,867,455 | G→A | Q33* (CAG→TAG) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,959,564 | C→T | W955* (TGG→TGA) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 3,148,900 | G→A | G335D (GGC→GAC) | gpr → | L‑glyceraldehyde 3‑phosphate reductase |
| RA | 3,256,301 | G→A | S117S (TCC→TCT) | cyuA ← | putative L‑cysteine desulfidase CyuA |
| RA | 3,329,743 | G→T | D261Y (GAT→TAT) | dacB → | peptidoglycan DD‑endopeptidase DacB |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,444,922 | G→C | T103S (ACC→AGC) | rpsE ← | 30S ribosomal subunit protein S5 |
| RA | 3,474,425 | T→G | K43T (AAA→ACA) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,486,502 | C→T | T128I (ACT→ATT) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,507,249 | C→T | D30N (GAC→AAC) | yhfT ← | uncharacterized protein YhfT |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,679,581 | G→A | G55R (GGA→AGA) | kdgK → | 2‑dehydro‑3‑deoxygluconokinase |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,729,441 | C→T | noncoding (105/160 nt) | xylZ ← | small RNA XylZ |
| RA | 3,730,560 | C→T | W69* (TGG→TAG) | xylA ← | xylose isomerase |
| RA | 3,931,779 | T→C | F155S (TTT→TCT) | kup → | K(+):H(+) symporter Kup |
| RA | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| RA | 4,026,650 | G→A | D42N (GAT→AAT) | fre → | NAD(P)H‑flavin reductase |
| RA | 4,153,836 | G→A | Q338* (CAA→TAA) | argE ← | acetylornithine deacetylase |
| RA | 4,193,996 | T→G | D70A (GAT→GCT) | thiE ← | thiamine phosphate synthase |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,479,944 | G→A | G72E (GGG→GAG) | yjgN → | inner membrane protein YjgN |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257746 | 259052 | 1307 | 7 [5] | [5] 6 | [frsA]–[phoE] | [frsA],crl,insB9,insA9,crl,[phoE] |
| * | * | ÷ | NC_000913 | 576653 | 577297 | 645 | 6 [5] | [5] 6 | [nmpC] | [nmpC] |
| * | * | ÷ | NC_000913 | 685727 | 686217 | 491 | 6 [5] | [5] 6 | [gltK]–[gltJ] | [gltK],[gltJ] |
| * | * | ÷ | NC_000913 | 1196831 | 1197384 | 554 | 7 [0] | [5] 6 | [ymfD] | [ymfD] |
| * | * | ÷ | NC_000913 | 1423571 | 1424634 | 1064 | 6 [5] | [4] 6 | [rzoR]–[trkG] | [rzoR],[trkG] |
| * | * | ÷ | NC_000913 | 1978484 | 1979270 | 787 | 15 [0] | [0] 16 | insB5–insA5 | insB5,insA5 |
| * | * | ÷ | NC_000913 | 3423867–3424234 | 3424438–3424238 | 5–572 | 6 [5] | [5] 6 | [rrlD] | [rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 19796 = | NA (NA) | 27 (0.570) | 25/482 | 0.8 | 75.0% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 361656 | 9 (0.190) | coding (205/612 nt) | lacA | galactoside O‑acetyltransferase | |||||
| * | ? | NC_000913 | = 255891 | 14 (0.290) | 25 (0.520) | 25/484 | 0.8 | 64.1% | intergenic (‑175/‑86) | pepD/gpt | peptidase D/xanthine‑guanine phsophoribosyltransferase |
| ? | NC_000913 | 273955 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 258675 | NA (NA) | 31 (0.650) | 29/484 | 0.6 | 73.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 362204 = | 11 (0.230) | coding (976/1254 nt) | lacY | lactose permease | |||||
| * | ? | NC_000913 | 273955 = | NA (NA) | 26 (0.540) | 25/484 | 0.8 | 96.3% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 677814 | 1 (0.020) | coding (400/1428 nt) | djlB | J domain‑containing protein DjlB | |||||
| * | ? | NC_000913 | = 275149 | NA (NA) | 34 (0.710) | 32/484 | 0.5 | 79.1% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 579184 = | 9 (0.190) | coding (411/411 nt) | ybcV | DUF1398 domain‑containing protein YbcV | |||||
| * | ? | NC_000913 | = 676175 | 18 (0.380) | 11 (0.230) | 11/484 | 2.1 | 37.9% | coding (373/978 nt) | ybeQ | Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 687851 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 781688 | 12 (0.250) | 17 (0.460) | 16/376 | 1.1 | 67.6% | intergenic (+36/‑397) | lysQ/nadA | tRNA‑Lys/quinolinate synthase |
| ? | NC_000913 | 781845 = | 7 (0.190) | intergenic (+193/‑240) | lysQ/nadA | tRNA‑Lys/quinolinate synthase | |||||
| * | ? | NC_000913 | = 1299498 | 5 (0.100) | 7 (0.150) | 7/476 | 2.7 | 74.0% | intergenic (+253/‑69) | ychE/insH21 | MarC family putative inner membrane protein YchE/IS5 family transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 1299499 = | NA (NA) | 7 (0.150) | 6/460 | 2.9 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1300694 = | 0 (0.000) | intergenic (+147/‑488) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1411924 | 6 (0.130) | 21 (0.490) | 20/432 | 1.0 | 85.1% | coding (25/936 nt) | ttcA | tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| ? | NC_000913 | 1434985 = | 2 (0.050) | intergenic (‑579/+200) | ynaM/uspF | protein YnaM/universal stress protein F | |||||
| * | ? | NC_000913 | 1469296 = | NA (NA) | 19 (0.400) | 19/484 | 1.2 | 61.3% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 4117985 | 12 (0.250) | coding (106/846 nt) | glpF | glycerol facilitator | |||||
| * | ? | NC_000913 | 1743490 = | 17 (0.360) | 25 (0.520) | 24/484 | 0.9 | 59.5% | coding (34/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743493 | 17 (0.360) | 14 (0.290) | 13/484 | 1.8 | 45.2% | coding (37/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1978483 | 0 (0.000) | 15 (0.310) | 15/484 | 1.6 | 100% | intergenic (‑286/+35) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB |
| ? | NC_000913 | = 2070271 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 14 (0.290) | 14/484 | 1.7 | 28.0% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2176322 = | 36 (0.750) | intergenic (‑1/+28) | gatZ/gatY | putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone/tagatose‑1,6‑bisphosphate aldolase 2 | |||||
| * | ? | NC_000913 | 1979271 = | 0 (0.000) | 14 (0.310) +TTAAGTAATTGAGTG |
14/454 | 1.6 | 100% | intergenic (‑56/‑482) | insA5/uspC | IS1 family protein InsA/universal stress protein C |
| ? | NC_000913 | 2996360 = | NA (NA) | intergenic (+2504/+12) | ygeI/insD4 | protein YgeI/IS2 insertion element protein InsB | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 14 (0.290) | 13/484 | 1.8 | 42.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2484281 | 19 (0.400) | coding (527/615 nt) | evgA | DNA‑binding transcriptional activator EvgA | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 58 (1.220) | 52/482 | 0.1 | 95.1% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3131469 = | 3 (0.060) | coding (940/1068 nt) | yghQ | putative transport protein YghQ | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 27 (0.570) | 26/484 | 0.8 | 71.0% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3206571 = | 11 (0.230) | coding (109/912 nt) | ttdA | L(+)‑tartrate dehydratase subunit alpha | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 17 (0.360) | 17/484 | 1.4 | 68.0% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3362227 | 8 (0.170) | coding (116/675 nt) | yhcA | putative fimbrial chaperone YhcA | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 8 (0.170) | 8/484 | 2.6 | 27.6% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3890573 | 21 (0.440) | coding (338/1248 nt) | tnaB | tryptophan:H(+) symporter TnaB | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 25 (0.520) | 25/484 | 0.8 | 58.1% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2484278 = | 18 (0.380) | coding (524/615 nt) | evgA | DNA‑binding transcriptional activator EvgA | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 35 (0.730) | 33/484 | 0.5 | 77.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3206574 | 10 (0.210) | coding (112/912 nt) | ttdA | L(+)‑tartrate dehydratase subunit alpha | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 30 (0.630) | 28/484 | 0.7 | 79.0% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3843039 = | 8 (0.170) | coding (751/1335 nt) | adeQ | adenine transporter | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 14 (0.290) | 14/484 | 1.7 | 40.0% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3890570 = | 21 (0.440) | coding (335/1248 nt) | tnaB | tryptophan:H(+) symporter TnaB | |||||
| * | ? | NC_000913 | 2514274 = | NA (NA) | 51 (1.080) | 49/478 | 0.1 | 73.9% | noncoding (2/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 2955099 | 18 (0.380) | coding (905/3543 nt) | recB | exodeoxyribonuclease V subunit RecB | |||||
| * | ? | NC_000913 | = 2515616 | NA (NA) | 26 (0.550) | 26/478 | 0.8 | 63.4% | noncoding (1344/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | 2955094 = | 15 (0.320) | coding (910/3543 nt) | recB | exodeoxyribonuclease V subunit RecB | |||||
| * | ? | NC_000913 | 2537833 = | 16 (0.340) | 14 (0.290) | 14/484 | 1.7 | 46.7% | coding (85/735 nt) | yfeS | PF05406 family protein YfeS |
| ? | NC_000913 | = 2997691 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 2537837 | 16 (0.340) | 16 (0.340) | 14/484 | 1.7 | 50.0% | coding (89/735 nt) | yfeS | PF05406 family protein YfeS |
| ? | NC_000913 | 2996361 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 2558698 | 4 (0.080) | 54 (1.170) | 49/468 | 0.1 | 84.5% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 16 (0.350) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
| * | ? | NC_000913 | 2765412 = | 8 (0.170) | 14 (0.360) | 13/396 | 1.4 | 74.6% | intergenic (‑259/+101) | abpA/yfjM | anti‑bacteriophage protein/protein YfjM |
| ? | NC_000913 | = 2765419 | 3 (0.080) | intergenic (‑266/+94) | abpA/yfjM | anti‑bacteriophage protein/protein YfjM | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 36 (0.760) | 36/482 | 0.4 | 83.7% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542049 | 7 (0.150) | coding (13/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 35 (0.730) | 34/484 | 0.4 | 76.1% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4546532 = | 11 (0.230) | coding (1437/2637 nt) | fimD | type I fimbriae usher protein | |||||
| * | ? | NC_000913 | 3652036 = | NA (NA) | 47 (0.980) | 46/484 | 0.2 | 85.5% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3843042 | 8 (0.170) | coding (748/1335 nt) | adeQ | adenine transporter | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 25 (0.520) | 22/484 | 1.0 | 67.6% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3655259 = | 12 (0.250) | coding (644/648 nt) | yhiD | inner membrane protein YhiD | |||||
| * | ? | NC_000913 | 3901122 = | 30 (0.630) | 13 (0.270) | 13/484 | 1.8 | 30.2% | coding (1099/1617 nt) | bglH | carbohydrate‑specific outer membrane porin, cryptic |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 3901126 | 32 (0.670) | 10 (0.210) | 10/482 | 2.2 | 23.8% | coding (1095/1617 nt) | bglH | carbohydrate‑specific outer membrane porin, cryptic |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 4117984 = | 12 (0.250) | 15 (0.320) | 15/480 | 1.6 | 55.6% | coding (107/846 nt) | glpF | glycerol facilitator |
| ? | NC_000913 | 4507459 = | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||