New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1743490 =	17 (0.360)	25 (0.520)	24/484	0.9	59.5%	coding (34/1374 nt)	mdtK	multidrug efflux pump MdtK
	?	NC_000913	= 2290113	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

CCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCT  >  NC_000913/1743253‑1743733                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                    gcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattaactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAAt                                                                                                                                                                                                                                        <  1:320832‑M1/14‑1 (MQ=255)   tGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATcc                                                                                                                                                                                                                                      >  2:388273/1‑251 (MQ=255)   ggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagagtacaaacatgttctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATcc                                                                                                                                                                                                                                      >  1:460285‑M1/236‑251 (MQ=255)         ggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGa                                                                                                                                                                                                                                >  1:362642‑M1/230‑251 (MQ=255)           gTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGAtt                                                                                                                                                                                                                              <  1:177407/251‑1 (MQ=255)                       tGTTCAGCACAACAGCAGGTGGAAAACGGCCTTACCAGTGAAGGCGGAAGAATGGTTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCTCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCaactc                                                                                                                                                                                                                  >  2:413526/1‑248 (MQ=255)                           cAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTTTTCACGTGCAGAAGTATATCATTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                                                                                                               <  1:239662‑M1/250‑36 (MQ=255)                               acaATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAAc                                                                                                                                                                                                          <  2:161957/251‑1 (MQ=255)                                         gTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTGGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCTTATAATTACAAATAAAAGGTGTTCACGTGCAGATGTATATCAGTGAAGCGCGTCTGTTATTAGTATTAGCAATCCCGGTGATTCTCGCGAAAATCGCCCAAACTGCGTTGGGt                                                                                                                                                                                                >  2:97313/1‑251 (MQ=255)                                              cgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtttt                                                                                                                                                                                             >  2:422101‑M1/193‑249 (MQ=255)                                                           aGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATg                                                                                                                                                                              <  1:118602/251‑1 (MQ=255)                                                              gAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                                                                                                            <  1:389270‑M1/250‑71 (MQ=255)                                                                             gCTATTTTCTCACTGGATAATTAATAAACCCTCCCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGTCTTTGTAGTCTCGCATATAACTACAAATAAAAGGTGTTCACGTGCAGAATTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAACCGCCCAAACTTCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGcc                                                                                                                                                            <  1:37980/251‑1 (MQ=255)                                                                                      catgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATg                                                                                                                                                   >  1:446591‑M1/153‑251 (MQ=255)                                                                                       atgcgggacaagaaaatctcttttctggtctgacggcgcttactgctggattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCACACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTGTagttccacccgcattg                                                                                                                                                  <  2:41563‑M1/100‑8 (MQ=255)                                                                                           gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc                                                                                                                                              >  1:379835‑M1/148‑251 (MQ=255)                                                                                           ggAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcg                                                                                                                                                <  1:164877/249‑1 (MQ=255)                                                                                              acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGt                                                                                                                                           >  2:191550‑M1/145‑251 (MQ=255)                                                                                                aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGACCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCg                                                                                                                                         <  2:340777‑M1/109‑1 (MQ=255)                                                                                                  taataaATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATATGGCCACCGACATGGCGGCGGTCggt                                                                                                                                       >  2:275334/1‑249 (MQ=255)                                                                                                       aaTCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGgtaaggtgcgaataagcggggaaattcttttcggctgactcagtcatttcatttcttcatttttgatccgattttttctcccgtaaattccttgaattagcctatttagacc                                                                                                                                  <  2:317599‑M1/251‑113 (MQ=255)                                                                                                              tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGGTATAGTGCCACCGACATTGCGGCGGTcgctatcgggaatttt                                                                                                                           <  2:355923‑M1/123‑8 (MQ=255)                                                                                                                 ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATc                                                                                                                        >  2:327664‑M1/126‑251 (MQ=255)                                                                                                                 aCAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                                                                                                                          <  2:45583‑M1/249‑121 (MQ=255)                                                                                                                    ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACCTCTATCTgg                                                                                                                     <  2:217700‑M1/129‑1 (MQ=255)                                                                                                                            gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGc                                                                                                             >  2:177029‑M1/115‑251 (MQ=255)                                                                                                                                    cTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGCTATCGGGACTTCTATCTGGCTTCCGGCGATCctct                                                                                                     >  1:75866/1‑251 (MQ=255)                                                                                                                                     tGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc                                                                                                     >  2:100624‑M1/1‑109 (MQ=255)                                                                                                                                            tcttTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt                                                                                                <  1:143894‑M1/248‑147 (MQ=255)                                                                                                                                             ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCACACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGGACTTCTATCTGGCTTCCGGCGATCCCCTTTGGTCa                                                                                              <  2:358958‑M1/152‑1 (MQ=255)                                                                                                                                                  tgcggcccgtTCAGGCGCCTTCTTACTCTCTCATATTACTCCAAATACACGGTGTTCACGTGCAGAAGCATATCAGTGAAGCGCGTCTGCTATTAGggaaggggcgaatcagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatctgcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgtg                                                                                        >  2:30975‑M1/5‑96 (MQ=255)                                                                                                                                                           aagtttatgacgcatgatgaaccctgttctatggctccagaggacaaacatgatctcatatcagggacgtgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTGGTCGATACCGGGATGGCGGGCGGCTGTAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCa                                                                              >  2:479456‑M1/84‑251 (MQ=255)                                                                                                                                                             gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTCTCGGTACTTCTTTCTGGGTTCCGGCGATCCTCTTTGGGCACCGACTGGTGCTGGCAtt                                                                            <  2:312715‑M1/170‑1 (MQ=255)                                                                                                                                                             cAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccact                                                                            >  1:135274‑M1/1‑85 (MQ=255)                                                                                                                                                                gatgaatcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTaa                                                                          <  2:340706‑M1/172‑1 (MQ=255)                                                                                                                                                                    cTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGCCGGCTATAGTGCCACCGACATGGCGGCGGTCGGTATCGGTACTTCTATCTGGCTTACGGCGATCCTCTTTGGTCCCGGACTGCTGATGGCCTTAACGCCg                                                                     >  2:388893/1‑251 (MQ=255)                                                                                                                                                                        ttAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatt                                                                 >  2:104927‑M1/1‑74 (MQ=255)                                                                                                                                                                           gTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTTGTCACGGACTGCTGCTGGCATTAACGCCGGTTATcc                                                              >  2:80926/1‑250 (MQ=255)                                                                                                                                                                           gTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATcg                                                              <  1:275334/251‑1 (MQ=255)                                                                                                                                                                              aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCgcgc                                                           >  2:185541‑M1/65‑251 (MQ=255)                                                                                                                                                                                           ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCA‑‑‑‑‑‑ATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTc                                         >  1:151787‑M1/52‑250 (MQ=255)                                                                                                                                                                                            gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTcc                                             <  2:144310‑M1/201‑1 (MQ=255)                                                                                                                                                                                              tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGt                                                                                                                                           >  2:341407‑M1/49‑155 (MQ=255)                                                                                                                                                                                              tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGt                                                                                                                                           <  1:341407‑M1/107‑1 (MQ=255)                                                                                                                                                                                              aTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttgg                                           >  1:415002‑M1/1‑52 (MQ=255)                                                                                                                                                                                               ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGt                                          >  1:100550‑M1/48‑251 (MQ=255)                                                                                                                                                                                                   atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTGCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTATCGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGAc                                      >  2:217069‑M1/44‑251 (MQ=255)                                                                                                                                                                                                             gTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataaca                            <  1:100624‑M1/251‑215 (MQ=255)                                                                                                                                                                                                                  gAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcc                       <  1:250673‑M1/251‑220 (MQ=255)                                                                                                                                                                                                                  gAAGTATATCAGTGAAGCGCGTCTGTTATTAGggaaggcgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttcgtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcc                       >  2:144191‑M1/1‑32 (MQ=255)                                                                                                                                                                                                                      tataTCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATACTCGAGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGCGATGGCCGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGTCCCTCTTTGGTAACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCCTTgcgcctc                    >  1:48808/1‑247 (MQ=255)                                                                                                                                                                                                                        tatCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAg                                                                                                                                                                <  2:211504/108‑1 (MQ=255)                                                                                                                                                                                                                        tatCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAg                                                                                                                                                                >  1:211504/1‑108 (MQ=255)                                                                                                                                                                                                                          gggacttgttcgcaccttccTTAGCATGAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACGGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACGTCTATCTGGCTTGCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTg               >  1:41563‑M1/21‑251 (MQ=255)                                                                                                                                                                                                                                      gTCTGTTATTAGCCTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTCTCGGTCCTTCTATCTGGCTTTCGGCGATCCTCTTTGGTCACGGTATGCTGCTGGCCTTAAAGCCGGGTATCGCGCACTTAAATGGTTCCGGTCGACGTGTGCGCCTTGTGCATCAGGTGCGACAAGGtttt   >  2:219097/1‑250 (MQ=255)                                                                                                                                                                                                                                       tCTGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagc  >  1:173446‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                    CCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCT  >  NC_000913/1743253‑1743733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.