New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)14 (0.290) 14/484 1.7 28.0% noncoding (1/768 nt) IS1 repeat region
?NC_000913 2176322 = 36 (0.750)intergenic (‑1/+28) gatZ/gatY putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone/tagatose‑1,6‑bisphosphate aldolase 2

AATGCGTTCGCGTGCAAACCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATCCTTAGTCGAT  >  NC_000913/2176076‑2176566
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
aatGCTTTCGCGTGCAAACCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGttt                                                                                                                                                                                                                                                   <  2:256314/250‑1 (MQ=255)
aatGCGTTCGCGTGCAAACCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGtttt                                                                                                                                                                                                                                                  >  2:73049/1‑251 (MQ=255)
   gCGTTCGCGTGCAAACCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGtttttt                                                                                                                                                                                                                                                <  1:88203/250‑1 (MQ=255)
               atatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATgg                                                                                                                                                                                                                                   >  2:424783‑M2/232‑251 (MQ=255)
                aaCCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGc                                                                                                                                                                                                                                  <  1:137921/251‑1 (MQ=255)
                    cAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGt                                                                                                                                                                                                                              >  1:397566/1‑251 (MQ=255)
                      aCTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGAGTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGc                                                                                                                                                                                                                            <  2:260295/251‑1 (MQ=255)
                          tATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGtt                                                                                                                                                                                                                         >  1:139776/1‑250 (MQ=255)
                            tCGGCAATCGTAAAAACAAATACGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTAt                                                                                                                                                                                                                       <  2:372641/250‑1 (MQ=255)
                                 aaTCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTAtgccctg                                                                                                                                                                                                                 >  2:211932/1‑251 (MQ=255)
                                      tAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTc                                                                                                                                                                                                            >  1:139120/1‑251 (MQ=255)
                                       aaaaaCAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCg                                                                                                                                                                                                           <  2:318974/251‑1 (MQ=255)
                                            aaaaTTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGcc                                                                                                                                                                                                      <  2:7126/250‑1 (MQ=255)
                                                     gAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGc                                                                                                                                                                                             <  1:447734/251‑1 (MQ=255)
                                                              ccGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACttt                                                                                                                                                                                    <  2:251705/251‑1 (MQ=255)
                                                                          ccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCCGGTGCGTTATGCCCTGCCCTCGCAGCCCCAATCGGCAATCACTTTGCTCACCCCATc                                                                                                                                                                        >  2:10166‑M2/173‑251 (MQ=255)
                                                                              gttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCgcgc                                                                                                                                                                    >  1:62336‑M2/169‑251 (MQ=255)
                                                                                tttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCAt                                                                                                                                                                  >  1:162057‑M2/167‑251 (MQ=255)
                                                                                   acggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGc                                                                                                                                                               <  1:233963‑M2/88‑1 (MQ=255)
                                                                                         attgattgACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCACTTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGAttt                                                                                                                                                         >  1:313538/1‑251 (MQ=255)
                                                                                                 aCCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACt                                                                                                                                                 >  1:403300/1‑251 (MQ=255)
                                                                                                  gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTg                                                                                                                                                <  2:9522‑M2/103‑1 (MQ=255)
                                                                                                     ggTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGc                                                                                                                                               <  1:106377/249‑1 (MQ=255)
                                                                                                          gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAaataat                                                                                                                                        <  2:62336‑M2/111‑1 (MQ=255)
                                                                                                          gACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAaataat                                                                                                                                        >  1:487024/1‑251 (MQ=255)
                                                                                                          gACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAaataa                                                                                                                                         <  2:139776/250‑1 (MQ=255)
                                                                                                            tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATcc                                                                                                                                      >  2:57914‑M2/139‑251 (MQ=255)
                                                                                                                    cAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGAt                                                                                                                               <  2:397566/250‑1 (MQ=255)
                                                                                                                     aaTCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCg                                                                                                                             >  2:263027/1‑251 (MQ=255)
                                                                                                                      cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCgg                                                                                                                            <  2:95814‑M2/123‑1 (MQ=255)
                                                                                                                         aGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCg                                                                                                                         <  1:211932/251‑1 (MQ=255)
                                                                                                                                       gCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGNTCg                                                                                                           >  2:438553/1‑251 (MQ=255)
                                                                                                                                          gTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCgg                                                                                                          <  1:73049/249‑1 (MQ=255)
                                                                                                                                                     aTGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGCCCAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAGATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCTGATTTAGCCGCCTGCAACTAATCCCGGGGCTCGCTCGCTTAAGGGTGCTCGGTCAGGTACttttt                                                                                             >  2:398839/1‑251 (MQ=255)
                                                                                                                                                        ccAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTaa                                                                                          <  2:3070/251‑1 (MQ=255)
                                                                                                                                                                  ttCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCg                                                                                  >  1:11872/1‑249 (MQ=255)
                                                                                                                                                                                gATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTc                                                                    >  1:56476/1‑249 (MQ=255)
                                                                                                                                                                                           cAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCTGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCTGTATGCCCTTCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGTATTTAGCCGACGGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGACAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCaa                                                       <  1:323635/251‑1 (MQ=255)
                                                                                                                                                                                                       ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCAttttt                                                                     <  2:29335‑M2/178‑1 (MQ=255)
                                                                                                                                                                                                       ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCAttttt                                                                     >  1:29335‑M2/48‑225 (MQ=255)
                                                                                                                                                                                                                 ccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAg                                 <  1:10166‑M2/214‑1 (MQ=255)
                                                                                                                                                                                                                 ccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGGGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATcccc                                   >  1:400483‑M2/38‑249 (MQ=255)
                                                                                                                                                                                                                   tCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGt                                <  1:190103/250‑1 (MQ=255)
                                                                                                                                                                                                                    cACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGttt                              <  2:487024/251‑1 (MQ=255)
                                                                                                                                                                                                                                 ccGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTg                  >  1:354519/1‑250 (MQ=255)
                                                                                                                                                                                                                                  cGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGa                 >  2:4458/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gttggcagcatcaccGTTTTTTCCGTTTTAAATGGCAGGTGCGTTATGACCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCATCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATcc           <  2:92413‑M2/236‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATCCTTAGTc     <  1:104680/251‑1 (MQ=255)
                                                                                                                                                                                                                                               ttttCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATCCTTAGTCg  >  2:249135/1‑250 (MQ=255)
                                                                                                                                                                                                                                                 ttCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCACCGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATCCTTAGTCGAt  >  2:2108/1‑250 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
AATGCGTTCGCGTGCAAACCCAACTTTATCGGCAATCGTAAAAACAAATTCGCGAAAGTCTGCCGGTGTCATTCCGGTATAACCGCCAAATTGATTGACCTGGTTTGACGTTGCTTCAATCAGCACTTTGCGCGTGCTGTTGCGATCAAATGCCAGCGCCGCTTCGATAACCAACGGATGGGCAGAACAGACTGAACATATGCCGATATGTTCACCAGCTTTATGCCGGGCAATTAACGTTTTCATGTTTTTTCCTTGTTAAATGGCAGGTGCGTTATGCCCTGCCCTCGCAGCCACAATCGGCAATCACTTTGCTCACCACATCGCGCATTGCGGATTTAGCCGACTGCAAATAATCCCGGGGATCGGTCGCTTCAGGGTGCTCGGTCAGGTAATTTTTTAACGCCTGCGAGAAGGCATTTTTCAGCTCCGTTGCAACGTTGATTTTGCATATCCCCAGTTTGATGGTTTGCTGAATATCCTTAGTCGAT  >  NC_000913/2176076‑2176566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.