mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 100,946 | T→C | M61T (ATG→ACG) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
| RA | 246,747 | G→T | S12S (TCG→TCT) | yafL → | NlpC/P60 family protein YafL |
| MC JC | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| RA | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| MC JC | 674,957 | Δ12,894 bp | IS5‑mediated | ybeL–gltI | ybeL, ybeQ, ybeR, djlB, ybeT, ybeU, djlC, hscC, rihA, gltL, gltK, gltJ, sroC, gltI |
| RA | 690,948 | G→A | V279V (GTC→GTT) | ybeX ← | CorC‑HlyC family protein YbeX |
| RA | 700,038 | G→A | H97Y (CAT→TAT) | umpH ← | UMP phosphatase |
| RA | 809,217 | 2 bp→AG | coding (40‑41/1290 nt) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| JC | 882,572 | +ATA | coding (163/759 nt) | deoR ← | DNA‑binding transcriptional repressor DeoR |
| RA | 915,799 | G→A | G83G (GGC→GGT) | aqpZ ← | water channel AqpZ |
| RA | 968,837 | G→A | D158N (GAT→AAT) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | 1,040,126 | G→T | L277L (CTG→CTT) | appB → | cytochrome bd‑II subunit 2 |
| JC JC | 1,049,306 | IS1 (+) +8 bp | coding (20‑27/645 nt) | gfcB ← | lipoprotein GfcB |
| RA | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| RA | 1,069,743 | C→T | A33T (GCA→ACA) | rutG ← | pyrimidine:H(+) symporter |
| RA | 1,098,620 | T→A | V245V (GTT→GTA) | ghrA → | glyoxylate/hydroxypyruvate reductase A |
| RA | 1,111,727 | 2 bp→TT | coding (865‑866/2544 nt) | opgH → | osmoregulated periplasmic glucans biosynthesis protein H |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,177,024 | G→A | D136N (GAT→AAT) | lolD → | lipoprotein release complex ‑ ATP binding subunit |
| RA | 1,184,402 | G→A | L15L (CTG→TTG) | potB ← | spermidine preferential ABC transporter membrane subunit PotB |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,196,746 | G→A | noncoding (36/72 nt) | C0293 → | small regulatory RNA C0293 |
| RA | 1,205,399 | G→A | V410V (GTG→GTA) | ymfN → | chimeric replication protein/phage terminase YmfN |
| RA | 1,220,493 | C→T | intergenic (+1292/+1812) | ymgF → / ← ymgD | inner membrane protein YmgF/PF16456 family protein YmgD |
| RA | 1,230,053 | G→A | D114D (GAC→GAT) | hlyE ← | hemolysin E |
| RA | 1,232,739 | G→A | P98S (CCT→TCT) | dsbB ← | protein thiol:quinone oxidoreductase DsbB |
| RA | 1,233,669 | G→A | S350F (TCT→TTT) | nhaB ← | Na(+):H(+) antiporter NhaB |
| RA | 1,236,874 | G→A | A123V (GCC→GTC) | ycgB ← | PF04293 family protein YcgB |
| JC JC | 1,237,034 | IS2 (+) +5 bp | coding (204‑208/1533 nt) | ycgB ← | PF04293 family protein YcgB |
| RA | 1,237,645 | G→A | E25E (GAG→GAA) | dadA → | D‑amino acid dehydrogenase |
| RA | 1,248,472 | G→A | L215L (CTG→TTG) | dhaM ← | dihydroxyacetone kinase subunit M |
| RA | 1,255,738 | G→A | P72L (CCA→CTA) | ycgV ← | putative autotransporter adhesin YcgV |
| RA | 1,287,294 | C→G | noncoding (35/85 nt) | tyrV ← | tRNA‑Tyr |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,304,393 | C→T | T187I (ACC→ATC) | oppC → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppC |
| RA | 1,306,736 | T→G | S325A (TCC→GCC) | oppF → | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF |
| RA | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| RA | 1,319,079 | C→T | G237D (GGT→GAT) | trpC ← | fused indole‑3‑glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
| RA | 1,319,571 | C→T | R73H (CGC→CAC) | trpC ← | fused indole‑3‑glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
| RA | 1,325,866 | G→A | R374H (CGC→CAC) | yciQ → | DUF2207 domain‑containing protein YciQ |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,342,404 | +TG | coding (484/738 nt) | pyrF → | orotidine‑5'‑phosphate decarboxylase |
| RA | 1,357,202 | C→T | intergenic (‑92/+221) | sapA ← / ← ymjA | putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,373,280 | C→A | P20H (CCC→CAC) | ycjO → | putative ABC transporter membrane subunit YcjO |
| RA | 1,385,418 | G→A | E434E (GAG→GAA) | ycjX → | DUF463 domain‑containing protein YcjX |
| RA | 1,391,249 | G→A | A202V (GCC→GTC) | ycjY ← | putative hydrolase YcjY |
| RA | 1,391,804 | G→A | S17F (TCT→TTT) | ycjY ← | putative hydrolase YcjY |
| RA | 1,394,147 | G→A | Q307Q (CAG→CAA) | mppA → | murein tripeptide ABC transporter periplasmic binding protein |
| RA | 1,395,041 | G→A | T294T (ACC→ACT) | ynaI ← | small conductance mechanosensitive channel YnaI |
| RA | 1,405,613 | G→A | T291T (ACG→ACA) | abgR → | putative LysR‑type DNA‑binding transcriptional regulator AbgR |
| RA | 1,406,570 | G→A | A409V (GCG→GTG) | dgcM ← | diguanylate cyclase DgcM |
| RA | 1,409,832 | G→A | G108S (GGT→AGT) | dbpA → | ATP‑dependent RNA helicase DbpA |
| RA | 1,417,136 | G→A | S84F (TCC→TTC) | recE ← | exonuclease VIII, ds DNA exonuclease, 5' ‑‑> 3' specific |
| RA | 1,419,612 | G→A | intergenic (‑156/+153) | ydaG ← / ← racR | uncharacterized protein YdaG/DNA‑binding transcriptional repressor RacR |
| RA | 1,445,970 | G→A | G31R (GGG→AGG) | ydbL → | DUF1318 domain‑containing protein YdbL |
| RA | 1,450,919 | G→A | S144F (TCC→TTC) | tynA ← | copper‑containing amine oxidase |
| RA | 1,461,879 | G→A | Q329Q (CAG→CAA) | paaJ → | beta‑ketoadipyl‑CoA thiolase |
| RA | 1,463,255 | G→A | L377L (TTG→TTA) | paaK → | phenylacetate‑CoA ligase |
| RA | 1,478,022 | G→A | Q134Q (CAG→CAA) | ynbA → | CDP‑alcohol phosphatidyltransferase domain‑containing protein YnbA |
| RA | 1,484,175 | G→A | S372N (AGC→AAC) | hrpA → | ATP‑dependent 3'‑>5' RNA helicase HrpA |
| RA | 1,491,033 | T→C | I44I (ATT→ATC) | cybB → | superoxide oxidase |
| RA | 1,538,159 | T→C | Y232C (TAC→TGC) | narY ← | nitrate reductase Z subunit beta |
| JC JC | 1,545,729 | IS5 (+) +4 bp | intergenic (‑15/+6) | yddK ← / ← yddL | leucine‑rich repeat domain‑containing protein YddK/putative uncharacterized protein YddL |
| RA | 1,550,008 | C→T | P870S (CCG→TCG) | fdnG → | formate dehydrogenase N subunit alpha |
| RA | 1,552,547 | C→T | A46T (GCA→ACA) | yddM ← | DNA‑binding transcriptional regulator YddM |
| RA | 1,559,106 | C→T | A269T (GCA→ACA) | ddpC ← | putative D,D‑dipeptide ABC transporter membrane subunit DdpC |
| RA | 1,568,027 | C→T | W266* (TGG→TAG) | digH ← | divisome localized glycosyl hydrolase |
| RA | 1,570,679 | C→T | G456D (GGT→GAT) | gadB ← | glutamate decarboxylase B |
| RA | 1,580,035 | A→G | N252N (AAT→AAC) | ydeM ← | putative anaerobic sulfatase maturation enzyme YdeM |
| RA | 1,584,325 | C→T | R721H (CGC→CAC) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,586,166 | C→T | G107G (GGG→GGA) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,586,351 | C→T | G46S (GGC→AGC) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,596,008 | A→G | intergenic (‑3566/+2609) | hipB ← / ← lsrK | antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase |
| RA | 1,598,775 | C→T | E479K (GAA→AAA) | lsrK ← | autoinducer‑2 kinase |
| RA | 1,600,234 | C→T | intergenic (‑25/+54) | lsrK ← / ← lsrR | autoinducer‑2 kinase/DNA‑binding transcriptional repressor LsrR |
| RA | 1,601,098 | C→A | S48S (TCG→TCT) | lsrR ← | DNA‑binding transcriptional repressor LsrR |
| RA | 1,601,103 | C→T | V47M (GTG→ATG) | lsrR ← | DNA‑binding transcriptional repressor LsrR |
| RA | 1,609,205 | C→T | intergenic (‑183/+24) | yneE ← / ← uxaB | PF01062 family inner membrane protein YneE/tagaturonate reductase |
| RA | 1,612,847 | C→T | R135R (CGG→CGA) | glsB ← | glutaminase 2 |
| RA | 1,616,529 | C→T | S256F (TCT→TTT) | yneK → | protein YneK |
| RA | 1,618,305 | C→T | V202I (GTA→ATA) | marC ← | inner membrane protein MarC |
| RA | 1,626,582 | C→T | E267K (GAG→AAG) | dcp ← | peptidyl‑dipeptidase Dcp |
| RA | 1,627,018 | C→T | Q121Q (CAG→CAA) | dcp ← | peptidyl‑dipeptidase Dcp |
| RA | 1,628,822 | G→A | E157E (GAG→GAA) | rspR → | DNA‑binding transcriptional repressor RspR |
| RA | 1,634,255 | C→T | intergenic (+43/+55) | pinQ → / ← tfaQ | putative recombinase PinQ/putative tail fiber assembly protein TfaQ |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| RA | 1,649,971 | C→T | P60S (CCG→TCG) | ydfD → | lysis protein |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,664,769 | (G)5→6 | coding (264/615 nt) | dmsD → | redox enzyme maturation protein DmsD |
| RA | 1,682,694 | A→T | Q179L (CAA→CTA) | rstA → | DNA‑binding transcriptional regulator RstA |
| RA | 1,690,549 | G→A | G233E (GGA→GAA) | ydgA → | DUF945 domain‑containing protein YdgA |
| RA | 1,702,757 | C→T | F175F (TTC→TTT) | add → | adenosine deaminase |
| RA | 1,739,117 | C→T | A228T (GCA→ACA) | punR ← | DNA‑binding transcriptional activator PunR |
| RA | 1,759,417 | C→T | M369I (ATG→ATA) | sufS ← | L‑cysteine desulfurase |
| RA | 1,774,963 | C→T | S93F (TCC→TTC) | aroD → | 3‑dehydroquinate dehydratase |
| RA | 1,778,585 | C→T | W239* (TGG→TGA) | ydiP ← | putative DNA‑binding transcriptional regulator YdiP |
| RA | 1,780,344 | C→T | A243V (GCC→GTC) | ydiQ → | putative electron transfer flavoprotein subunit YdiQ |
| RA | 1,785,863 | C→T | G417D (GGT→GAT) | ppsA ← | phosphoenolpyruvate synthetase |
| RA | 1,787,538 | C→T | P32S (CCC→TCC) | ppsR → | phosphoenolpyruvate synthetase regulatory protein |
| RA | 1,791,363 | C→T | G220R (GGA→AGA) | rflP ← | anti‑FlhDC factor RflP |
| RA | 1,793,377 | Δ1 bp | coding (182/750 nt) | btuD ← | vitamin B12 ABC transporter ATP binding subunit |
| RA | 1,798,265 | C→T | T226T (ACG→ACA) | pheS ← | phenylalanine‑‑tRNA ligase subunit alpha |
| RA | 1,799,455 | C→T | A99T (GCA→ACA) | rplT ← | 50S ribosomal subunit protein L20 |
| RA | 1,806,073 | A→G | L4S (TTG→TCG) | ydiY ← | acid‑inducible putative outer membrane protein YdiY |
| RA | 1,815,685 | C→T | L607F (CTT→TTT) | katE → | catalase HPII |
| RA | 1,818,136 | C→T | G122D (GGT→GAT) | chbF ← | monoacetylchitobiose‑6‑phosphate hydrolase |
| RA | 1,818,821 | C→T | A209A (GCG→GCA) | chbR ← | ChbR |
| RA | 1,831,418 | C→T | V189I (GTC→ATC) | astC ← | succinylornithine transaminase |
| RA | 1,832,840 | C→T | T138I (ACC→ATC) | xthA → | exodeoxyribonuclease III |
| RA | 1,836,546 | C→T | R158R (CGC→CGT) | ynjB → | putative ABC transporter periplasmic binding protein YnjB |
| RA | 1,838,037 | C→T | P276S (CCT→TCT) | ynjC → | putative ABC transporter membrane subunit YnjC |
| RA | 1,874,202 | G→A | intergenic (‑20/‑150) | yoaI ← / → yeaL | protein YoaI/DUF441 domain‑containing inner membrane protein YeaL |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,911,929 | 2 bp→TT | coding (647‑648/882 nt) | htpX ← | protease HtpX |
| RA | 1,933,143 | G→A | H488Y (CAT→TAT) | edd ← | phosphogluconate dehydratase |
| RA | 1,953,295 | G→A | K198K (AAG→AAA) | cmoA → | carboxy‑S‑adenosyl‑L‑methionine synthase |
| RA | 1,961,288 | C→T | N409N (AAC→AAT) | argS → | arginine‑‑tRNA ligase |
| RA | 1,972,858 | C→T | S161N (AGC→AAC) | cheW ← | chemotaxis protein CheW |
| MC JC | 1,975,677 | Δ5 bp | coding (575‑579/927 nt) | motB ← | motility protein B |
| MC JC | 1,978,503 | Δ776 bp | insB5–insA5 | insB5, insA5 | |
| RA | 2,039,844 | C→T | P123S (CCA→TCA) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| MC JC | 2,090,645 | Δ36 bp | coding (454‑489/900 nt) | hisG → | ATP phosphoribosyltransferase |
| RA | 2,095,699 | C→T | A192V (GCC→GTC) | hisA → | 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase |
| RA | 2,099,525 | A→T | I30N (ATT→AAT) | ugd ← | UDP‑glucose 6‑dehydrogenase |
| RA | 2,099,720 | (A)5→6 | intergenic (‑107/+142) | ugd ← / ← gnd | UDP‑glucose 6‑dehydrogenase/6‑phosphogluconate dehydrogenase, decarboxylating |
| RA | 2,111,259 | Δ1 bp | coding (718/900 nt) | rfbD ← | dTDP‑4‑dehydrorhamnose reductase |
| RA | 2,138,991 | G→A | E364K (GAA→AAA) | yegH → | inner membrane protein YegH |
| RA | 2,155,880 | C→T | L206L (CTC→CTT) | mdtB → | multidrug efflux pump RND permease subunit MdtB |
| RA | 2,173,363 | Δ2 bp | intergenic (‑490/+918) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,173,448 | C→T | intergenic (‑575/+834) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| JC JC | 2,177,268 | IS1 (+) +9 bp | intergenic (‑64/+236) | gatY ← / ← fbaB | tagatose‑1,6‑bisphosphate aldolase 2/fructose‑bisphosphate aldolase class I |
| RA | 2,224,169 | A→G | F234F (TTT→TTC) | pbpG ← | peptidoglycan DD‑endopeptidase PbpG |
| RA | 2,237,105 | G→T | P217T (CCG→ACG) | mglC ← | D‑galactose/methyl‑galactoside ABC transporter membrane subunit |
| JC JC | 2,237,871 | IS1 (–) +9 bp | coding (1411‑1419/1521 nt) | mglA ← | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit |
| RA | 2,264,460 | 2 bp→AT | coding (598‑599/1182 nt) | setB → | sugar exporter SetB |
| RA | 2,283,534 | G→A | T138T (ACC→ACT) | yejK ← | nucleoid‑associated protein YejK |
| RA | 2,319,078 | C→A | D267Y (GAT→TAT) | rcsC ← | histidine kinase RcsC |
| RA | 2,360,550 | Δ1 bp | coding (865/1206 nt) | rhmD ← | L‑rhamnonate dehydratase |
| RA | 2,392,233 | C→G | G270A (GGT→GCT) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| RA | 2,405,845 | Δ2 bp | coding (796‑797/939 nt) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,423,891 | C→T | V207I (GTA→ATA) | hisP ← | lysine/arginine/ornithine ABC transporter/histidine ABC transporter, ATP binding subunit |
| RA | 2,443,447 | G→A | A562T (GCG→ACG) | mnmC → | fused tRNA 5‑aminomethyl‑2‑thiouridylate methyltransferase and tRNA 5‑aminomethyl‑2‑thiouridylate synthase |
| RA | 2,473,392 | G→A | intergenic (‑146/‑212) | yfdO ← / → yfdP | protein YdfO/uncharacterized protein YfdP |
| RA | 2,473,397 | +T | intergenic (‑151/‑207) | yfdO ← / → yfdP | protein YdfO/uncharacterized protein YfdP |
| RA | 2,492,821 | G→A | A145V (GCA→GTA) | frc ← | formyl‑CoA transferase |
| RA | 2,501,547 | C→T | L140F (CTC→TTC) | ypdC → | putative AraC‑type DNA‑binding transcriptional regulator YpdC |
| RA | 2,510,609 | C→T | P327L (CCG→CTG) | yfeO → | putative transport protein YfeO |
| RA | 2,536,368 | C→T | intergenic (+25/+18) | crr → / ← pdxK | Enzyme IIA(Glc)/pyridoxine/pyridoxal/pyridoxamine kinase |
| MC JC | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| RA | 2,570,589 | C→T | G388D (GGC→GAC) | eutE ← | acetaldehyde dehydrogenase (acetylating) EutE |
| RA | 2,578,489 | C→T | intergenic (‑112/‑177) | maeB ← / → talA | malate dehydrogenase (oxaloacetate‑decarboxylating) (NADP(+))/transaldolase A |
| RA | 2,579,248 | G→A | V195M (GTG→ATG) | talA → | transaldolase A |
| RA | 2,591,871 | G→A | D89N (GAC→AAC) | dapE → | succinyl‑diaminopimelate desuccinylase |
| RA | 2,603,084 | G→A | V423I (GTA→ATA) | hyfB → | hydrogenase 4 component B |
| RA | 2,605,181 | G→A | G124D (GGC→GAC) | hyfD → | hydrogenase 4 component D |
| RA | 2,606,639 | G→A | P126P (CCG→CCA) | hyfE → | hydrogenase 4 component E |
| RA | 2,626,943 | G→A | L666F (CTT→TTT) | pdeF ← | cyclic di‑GMP phosphodiesterase PdeF |
| RA | 2,639,019 | G→A | L89L (CTG→TTG) | yfgM ← | ancillary SecYEG translocon subunit |
| RA | 2,640,757 | C→T | A350T (GCA→ACA) | ispG ← | (E)‑4‑hydroxy‑3‑methylbut‑2‑enyl‑diphosphate synthase (flavodoxin) |
| RA | 2,648,610 | G→A | G1226G (GGC→GGT) | yfhM ← | alpha2‑macroglobulin |
| RA | 2,653,800 | C→T | intergenic (‑345/‑55) | timR ← / → ryfA | putative small regulatory RNA TimR/small regulatory RNA RyfA |
| RA | 2,656,852 | C→T | G78R (GGA→AGA) | fdx ← | reduced ferredoxin |
| RA | 2,678,538 | C→T | G277D (GGT→GAT) | yphF ← | putative ABC transporter periplasmic binding protein YphF |
| RA | 2,701,726 | C→T | A2T (GCT→ACT) | pdxJ ← | pyridoxine 5'‑phosphate synthase |
| RA | 2,716,637 | G→A | intergenic (‑188/‑117) | grcA ← / → ung | stress‑induced alternate pyruvate formate‑lyase subunit/uracil‑DNA glycosylase |
| RA | 2,731,385 | C→T | intergenic (‑228/+215) | rrsG ← / ← clpB | 16S ribosomal RNA/chaperone protein ClpB |
| RA | 2,732,992 | G→A | I394I (ATC→ATT) I394I (ATC→ATT) |
clpB ← clpB ← |
chaperone protein ClpB chaperone protein ClpB |
| RA | 2,736,071 | C→T | intergenic (‑60/‑75) | rluD ← / → bamD | 23S rRNA pseudouridine(1911/1915/1917) synthase/outer membrane protein assembly factor BamD |
| RA | 2,744,436 | A→C | V32G (GTT→GGT) | rplS ← | 50S ribosomal subunit protein L19 |
| RA | 2,755,976 | C→T | intergenic (+21/‑183) | ssrA → / → intA | tmRNA/integrase IntA |
| RA | 2,756,019 | C→T | intergenic (+64/‑140) | ssrA → / → intA | tmRNA/integrase IntA |
| RA | 2,762,148 | C→T | D465N (GAT→AAT) | abpB ← | putative helicase YfjK |
| RA | 2,762,272 | C→T | G423G (GGG→GGA) | abpB ← | putative helicase YfjK |
| RA | 2,764,570 | C→T | S195N (AGT→AAT) | abpA ← | anti‑bacteriophage protein |
| RA | 2,785,731 | C→T | intergenic (‑720/+31) | ypjC ← / ← ileY | DUF5507 domain‑containing protein YpjC/tRNA‑Ile |
| RA | 2,789,629 | C→T | A215A (GCC→GCT) | glaH → | glutarate dioxygenase GlaH |
| RA | 2,791,031 | A→G | V350V (GTA→GTG) | lhgD → | L‑2‑hydroxyglutarate dehydrogenase |
| RA | 2,802,044 | C→T | P233S (CCG→TCG) | nrdE → | ribonucleoside‑diphosphate reductase 2 subunit alpha |
| RA | 2,804,133 | C→T | S211F (TCT→TTT) | nrdF → | ribonucleoside‑diphosphate reductase 2 subunit beta |
| RA | 2,808,797 | G→A | intergenic (+673/‑820) | proX → / → ygaZ | glycine betaine ABC transporter periplasmic binding protein ProX/L‑valine exporter, YgaZ component |
| RA | 2,811,408 | G→A | intergenic (+108/‑19) | mprA → / → emrA | DNA‑binding transcriptional regulator MprA/multidrug efflux pump membrane fusion protein EmrA |
| RA | 2,814,459 | Δ1 bp | coding (275/516 nt) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,814,461 | C→T | L91L (CTG→CTA) | luxS ← | S‑ribosylhomocysteine lyase |
| RA | 2,816,017 | C→T | A141A (GCG→GCA) | gshA ← | glutamate‑‑cysteine ligase |
| RA | 2,831,913 | C→T | G126D (GGC→GAC) | norR ← | DNA‑binding transcriptional dual regulator NorR |
| RA | 2,840,190 | C→T | P223S (CCG→TCG) | ascF → | beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,840,328 | C→T | P269S (CCG→TCG) | ascF → | beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,842,650 | C→T | V132I (GTA→ATA) | hycI ← | hydrogenase 3 maturation protease |
| RA | 2,847,942 | C→T | V434I (GTC→ATC) | hycC ← | formate hydrogenlyase subunit HycC |
| RA | 2,850,416 | C→T | S7N (AGC→AAC) | hycA ← | regulator of the transcriptional regulator FhlA |
| RA | 2,867,455 | G→A | Q33* (CAG→TAG) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,868,958 | C→T | E188K (GAA→AAA) | pcm ← | protein‑L‑isoaspartate O‑methyltransferase |
| RA | 2,871,153 | T→G | N51T (AAC→ACC) | truD ← | tRNA pseudouridine(13) synthase |
| RA | 2,878,577 | G→A | P93S (CCT→TCT) | cas2 ← | CRISPR‑associated endoribonuclease Cas2 |
| RA | 2,888,948 | C→T | K384K (AAG→AAA) | cysI ← | sulfite reductase, hemoprotein subunit |
| RA | 2,895,972 | C→T | G195E (GGA→GAA) | ygcR ← | putative flavoprotein |
| RA | 2,896,106 | C→T | V150V (GTG→GTA) | ygcR ← | putative flavoprotein |
| RA | 2,908,639 | C→T | G343D (GGT→GAT) | pyrG ← | CTP synthetase |
| RA | 2,926,543 | 2 bp→TT | coding (236‑237/1365 nt) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 2,929,144 | C→T | P306S (CCG→TCG) | sdaC → | L‑serine:H(+) symporter SdaC |
| RA | 2,930,811 | C→T | R412R (CGC→CGT) | sdaB → | L‑serine deaminase II |
| RA | 2,938,366 | T→C | M300T (ATG→ACG) | fucK → | L‑fuculokinase |
| RA | 2,942,432 | C→T | D46N (GAT→AAT) | gcvA ← | DNA‑binding transcriptional dual regulator GcvA |
| RA | 2,944,561 | C→T | A7V (GCC→GTC) | csdE → | sulfur acceptor protein CsdE |
| RA | 2,952,187 | C→T | S92N (AGC→AAC) | recD ← | exodeoxyribonuclease V subunit RecD |
| RA | 2,960,610 | C→T | A607T (GCG→ACG) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 2,971,926 | C→T | I110I (ATC→ATT) | tas → | putative NADP(H)‑dependent aldo‑keto reductase Tas |
| RA | 2,976,341 | C→T | noncoding (45/82 nt) | omrB ← | small regulatory RNA OmrB |
| RA | 2,981,681 | C→T | D168N (GAT→AAT) | araE ← | arabinose:H(+) symporter |
| RA | 2,981,924 | C→T | G87R (GGG→AGG) | araE ← | arabinose:H(+) symporter |
| RA | 2,982,000 | C→T | Q61Q (CAG→CAA) | araE ← | arabinose:H(+) symporter |
| RA | 2,982,537 | C→T | G241D (GGT→GAT) | kduD ← | putative 2‑keto‑3‑deoxy‑D‑gluconate dehydrogenase |
| RA | 2,983,031 | C→T | L76L (CTG→CTA) | kduD ← | putative 2‑keto‑3‑deoxy‑D‑gluconate dehydrogenase |
| RA | 3,004,054 | G→A | A578V (GCT→GTT) | ygeV ← | putative sigma(54)‑dependent transcriptional regulator YgeV |
| RA | 3,040,731 | G→A | L31L (CTC→CTT) | ygfX ← | protein YgfX |
| RA | 3,040,842 | 2 bp→AA | coding (228‑229/267 nt) | sdhE ← | FAD assembly factor |
| RA | 3,043,360 | G→A | I88I (ATC→ATT) | yqfB ← | N(4)‑acetylcytidine amidohydrolase |
| RA | 3,062,875 | C→T | P676S (CCG→TCG) | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,070,950 | C→T | E99K (GAA→AAA) | fbaA ← | fructose‑bisphosphate aldolase class II |
| RA | 3,071,412 | C→T | intergenic (‑168/+47) | fbaA ← / ← pgk | fructose‑bisphosphate aldolase class II/phosphoglycerate kinase |
| RA | 3,077,625 | A→G | V412A (GTG→GCG) | cmtA ← | mannitol‑specific PTS enzyme IICB component CmtA |
| RA | 3,079,137 | A→G | M65T (ATG→ACG) | cmtB ← | mannitol‑specific PTS enzyme IIA component CmtB |
| RA | 3,089,109 | A→T | K276* (AAA→TAA) | galP → | galactose:H(+) symporter |
| RA | 3,095,697 | C→T | L200L (CTC→CTT) | yggS → | PLP homeostasis protein |
| RA | 3,108,763 | C→T | K131K (AAG→AAA) | speC ← | constitutive ornithine decarboxylase |
| RA | 3,112,124 | C→T | G309D (GGT→GAT) | yghF ← | putative type II secretion system C‑type protein YghF |
| RA | 3,118,557 | C→T | E186K (GAA→AAA) | yghJ ← | putative lipoprotein YghJ |
| MC JC | 3,131,341 | Δ266 bp | IS5‑mediated | yghQ ← | putative transport protein YghQ |
| RA | 3,132,532 | G→A | P227P (CCC→CCT) | yghR ← | putative ATP‑binding protein YghR |
| RA | 3,156,513 | C→T | R387C (CGC→TGC) | yqhD → | NADPH‑dependent aldehyde reductase YqhD |
| RA | 3,161,616 | G→A | R352C (CGC→TGC) | ftsP ← | cell division protein FtsP |
| RA | 3,167,566 | C→T | V51V (GTG→GTA) | ygiS ← | putative deoxycholate binding periplasmic protein |
| RA | 3,174,570 | C→T | G276D (GGC→GAC) | parE ← | DNA topoisomerase IV subunit B |
| RA | 3,176,213 | C→T | E207E (GAG→GAA) | cpdA ← | cAMP phosphodiesterase |
| RA | 3,180,123 | C→T | A127V (GCC→GTC) | ygiB → | DUF1190 domain‑containing protein YgiB |
| RA | 3,188,706 | C→T | pseudogene (1275/2434 nt) | yqiG → | putative outer membrane usher protein YqiG |
| RA | 3,199,080 | C→T | G188S (GGT→AGT) | glnE ← | fused glutamine synthetase deadenylase/glutamine synthetase adenylyltransferase |
| RA | 3,207,283 | C→T | S274F (TCT→TTT) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,207,599 | C→T | P77S (CCG→TCG) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,226,845 | G→A | W204* (TGG→TGA) | ygjI → | putative transporter YgjI |
| RA | 3,256,063 | G→A | P197S (CCG→TCG) | cyuA ← | putative L‑cysteine desulfidase CyuA |
| RA | 3,278,475 | G→A | A64V (GCC→GTC) | agaR ← | DNA‑binding transcriptional repressor AgaR |
| RA | 3,301,965 | G→A | E161K (GAA→AAA) | ubiU → | ubiquinone biosynthesis protein UbiU |
| RA | 3,329,743 | G→T | D261Y (GAT→TAT) | dacB → | peptidoglycan DD‑endopeptidase DacB |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,474,425 | T→G | K43T (AAA→ACA) | rpsL ← | 30S ribosomal subunit protein S12 |
| RA | 3,551,283 | C→T | L397L (CTG→CTA) | malP ← | maltodextrin phosphorylase |
| RA | 3,555,156 | G→A | W691* (TGG→TAG) | malT → | DNA‑binding transcriptional activator MalT |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,690,228 | G→A | L12L (CTG→TTG) | bcsZ ← | endo‑1,4‑D‑glucanase |
| RA | 3,693,644 | G→A | F531F (TTC→TTT) | bcsA ← | cellulose synthase catalytic subunit |
| RA | 3,698,773 | G→A | G187D (GGC→GAC) | bcsG → | cellulose phosphoethanolamine transferase |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,759,088 | G→A | A258A (GCC→GCT) | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,772,372 | G→A | G31D (GGT→GAT) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| RA | 3,802,292 | G→A | P256L (CCA→CTA) | waaO ← | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase |
| RA | 3,808,530 | G→A | intergenic (‑292/‑10) | rirA ← / → waaA | small regulatory RNA RirA/KDO transferase |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,822,521 | G→A | S41N (AGC→AAC) | spoT → | bifunctional (p)ppGpp synthase/hydrolase SpoT |
| RA | 3,825,156 | G→A | E214E (GAG→GAA) | trmH → | tRNA (Gm18) 2'‑O‑methyltransferase |
| RA | 3,826,233 | G→A | A342T (GCA→ACA) | recG → | ATP‑dependent DNA helicase RecG |
| RA | 3,827,610 | C→A | T352T (ACG→ACT) | gltS ← | glutamate:sodium symporter |
| RA | 3,829,661 | G→A | M239I (ATG→ATA) | xanP → | xanthine:H(+) symporter XanP |
| RA | 3,832,227 | T→C | T771A (ACG→GCG) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| RA | 3,833,557 | G→A | D327D (GAC→GAT) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| RA | 3,845,471 | G→A | C503Y (TGC→TAC) | adeD → | adenine deaminase |
| RA | 3,857,116 | G→A | A430V (GCC→GTC) | yidJ ← | putative sulfatase/phosphatase YidJ |
| RA | 3,867,448 | G→A | intergenic (‑26/‑280) | ibpA ← / → yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| RA | 3,938,441 | Δ1 bp | coding (215/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| RA | 3,956,003 | G→A | D225N (GAT→AAT) | ilvA → | threonine deaminase |
| RA | 3,961,206 | C→T | A177V (GCC→GTC) | rep → | ATP‑dependent DNA helicase Rep |
| RA | 3,976,758 | C→T | L161F (CTC→TTC) | wzxE → | lipid IIIECA flippase |
| RA | 3,981,431 | C→T | S182L (TCG→TTG) | yifK → | putative transporter YifK |
| RA | 3,989,756 | C→T | V25M (GTG→ATG) | hemD ← | uroporphyrinogen‑III synthase |
| RA | 4,000,782 | C→T | G92D (GGC→GAC) | yigE ← | DUF2233 domain‑containing protein YigE |
| RA | 4,002,584 | C→T | W72* (TGG→TGA) | yigF ← | DUF2628 domain‑containing protein YigF |
| RA | 4,011,926 | C→T | S284F (TCT→TTT) K297K (AAG→AAA) |
bioP → metR ← |
biotin transporter DNA‑binding transcriptional dual regulator MetR |
| RA | 4,038,082 | C→T | noncoding (564/2905 nt) | rrlA → | 23S ribosomal RNA |
| RA | 4,047,091 | C→T | V42V (GTC→GTT) | polA → | DNA polymerase I |
| RA | 4,048,733 | C→T | L590F (CTC→TTC) | polA → | DNA polymerase I |
| RA | 4,061,901 | C→T | P246L (CCG→CTG) | yihM → | putative TIM barrel domain‑containing protein YihM |
| RA | 4,079,837 | C→T | D29D (GAC→GAT) | yiiF → | protein YiiF |
| RA | 4,084,932 | G→T | F297L (TTC→TTA) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,144,084 | C→T | S30S (AGC→AGT) | pflD → | putative formate acetyltransferase 2 |
| RA | 4,155,646 | C→T | P216S (CCA→TCA) | argC → | N‑acetylglutamylphosphate reductase |
| RA | 4,171,728 | C→T | noncoding (92/120 nt) | rrfB → | 5S ribosomal RNA |
| RA | 4,171,781 | A→G | intergenic (+25/‑276) | rrfB → / → murB | 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase |
| RA | 4,193,996 | T→G | D70A (GAT→GCT) | thiE ← | thiamine phosphate synthase |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,282,773 | A→G | N101N (AAT→AAC) | yjcF ← | pentapeptide repeat‑containing protein YjcF |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,297,598 | G→A | S590L (TCG→TTG) | fdhF ← | formate dehydrogenase H |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,327,959 | C→T | S275S (TCC→TCT) | rdcA → | regulator of diguanylate cyclase RdcA |
| RA | 4,328,040 | G→A | Q302Q (CAG→CAA) | rdcA → | regulator of diguanylate cyclase RdcA |
| RA | 4,399,484 | C→T | A78V (GCT→GTT) | miaA → | tRNA dimethylallyltransferase |
| RA | 4,400,254 | C→T | intergenic (+52/‑34) | miaA → / → hfq | tRNA dimethylallyltransferase/RNA‑binding protein Hfq |
| RA | 4,411,388 | C→T | G29G (GGC→GGT) | yjfK → | DUF2491 domain‑containing protein YjfK |
| RA | 4,423,337 | C→T | S164S (TCC→TCT) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| RA | 4,449,586 | G→A | P23S (CCG→TCG) | ppa ← | inorganic pyrophosphatase |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,524,821 | C→T | E64K (GAA→AAA) | yjhH ← | putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| RA | 4,535,336 | G→A | intergenic (‑1283/‑1261) | topAI ← / → ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| RA | 4,546,601 | C→T | I502I (ATC→ATT) | fimD → | type I fimbriae usher protein |
| RA | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| RA | 4,638,240 | G→A | L21L (TTG→TTA) | creD → | putative inner membrane protein CreD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3423817–3424233 | 3424468–3424238 | 6–652 | 43 [42] | [42] 43 | [rrlD] | [rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 270541 = | NA (NA) | 78 (0.640) | 51/598 | 1.2 | 63.4% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 483810 | 45 (0.370) | coding (594/3150 nt) | acrB | multidrug efflux pump RND permease AcrB | |||||
| * | ? | NC_000913 | 270541 = | NA (NA) | 65 (0.530) | 55/598 | 1.0 | 53.7% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 1666974 = | 56 (0.460) | coding (246/696 nt) | bidA | dethiobiotin synthetase BidA | |||||
| * | ? | NC_000913 | 273955 = | NA (NA) | 59 (0.480) | 47/598 | 1.5 | 40.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 873546 | 87 (0.710) | coding (568/2349 nt) | pdeI | putative c‑di‑GMP phosphodiesterase PdeI | |||||
| * | ? | NC_000913 | = 275149 | NA (NA) | 70 (0.570) | 53/598 | 1.1 | 44.6% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 873543 = | 87 (0.710) | coding (565/2349 nt) | pdeI | putative c‑di‑GMP phosphodiesterase PdeI | |||||
| * | ? | NC_000913 | 483809 = | 45 (0.370) | 79 (0.640) | 56/598 | 1.0 | 63.7% | coding (595/3150 nt) | acrB | multidrug efflux pump RND permease AcrB |
| ? | NC_000913 | = 1470516 | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | 656630 = | 82 (0.670) | 97 (0.790) | 68/598 | 0.5 | 54.2% | coding (74/561 nt) | pagP | Lipid A palmitoyltransferase |
| ? | NC_000913 | = 689045 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 656633 | 80 (0.650) | 69 (0.560) | 56/598 | 1.0 | 46.3% | coding (77/561 nt) | pagP | Lipid A palmitoyltransferase |
| ? | NC_000913 | 687851 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1207805 | 67 (0.550) | 42 (0.360) | 35/566 | 2.3 | 35.2% | coding (305/630 nt) | ycfK | protein StfP |
| ? | NC_000913 | = 1209602 | 91 (0.780) | intergenic (‑483/‑83) | tfaE/pinE | putative tail fiber assembly protein TfaE/site‑specific DNA recombinase | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 172 (1.420) | 97/590 | 0.0 | 100% | intergenic (+253/‑69) | ychE/insH21 | MarC family putative inner membrane protein YchE/IS5 family transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1470516 | NA (NA) | 70 (0.570) | 53/596 | 1.1 | 55.1% | noncoding (1221/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 1666975 | 57 (0.470) | coding (245/696 nt) | bidA | dethiobiotin synthetase BidA | |||||
| * | ? | NC_000913 | = 1470516 | NA (NA) | 98 (0.800) | 74/598 | 0.3 | 51.0% | noncoding (1221/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 4117985 | 94 (0.770) | coding (106/846 nt) | glpF | glycerol facilitator | |||||
| * | ? | NC_000913 | = 1470516 | NA (NA) | 76 (0.620) | 61/594 | 0.7 | 60.3% | noncoding (1221/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 4459256 = | 50 (0.410) | coding (1298/1353 nt) | tldE | metalloprotease subunit TldE | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 76 (0.620) | 64/598 | 0.6 | 41.8% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2387877 | 106 (0.860) | coding (550/717 nt) | yfbN | uncharacterized protein YfbN | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 54 (0.440) | 42/598 | 1.9 | 32.7% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2387874 = | 111 (0.910) | coding (553/717 nt) | yfbN | uncharacterized protein YfbN | |||||
| * | ? | NC_000913 | = 3948229 | 60 (0.490) | 74 (0.610) | 49/590 | 1.3 | 56.0% | coding (144/339 nt) | maoP | macrodomain Ori protein |
| ? | NC_000913 | 3948284 = | 57 (0.470) | coding (199/339 nt) | maoP | macrodomain Ori protein | |||||
| * | ? | NC_000913 | 4117984 = | 92 (0.760) | 90 (0.740) | 57/594 | 0.9 | 49.5% | coding (107/846 nt) | glpF | glycerol facilitator |
| ? | NC_000913 | = 4508679 | NA (NA) | noncoding (1/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | = 4459257 | 65 (0.530) | 65 (0.530) | 40/598 | 2.1 | 50.0% | coding (1299/1353 nt) | tldE | metalloprotease subunit TldE |
| ? | NC_000913 | = 4508679 | NA (NA) | noncoding (1/1221 nt) | IS30 | repeat region | |||||