Gene Mutants - Detail

ME No. ME7986
Strain Name MG1655
Sex F-
Plasmid Integrated
Plasmid Autonomous
Prophage
Genotype
Parent Donor
Parent Recipient
Methods
Latest Marker
Selection
Source B. Bachmann
Reference Robinson JL, Brynildsen MP.
A kinetic platform to determine the fate of nitric oxide in Escherichia coli.
PLoS Comput. Biol.  (2013)  9(5)   e1003049  
[PubMed ID = 23658508]  [RRC reference
Hill NS, Buske PJ, Shi Y, Levin PA.
A moonlighting enzyme links Escherichia coli cell size with central metabolism.
PLoS Genet.  (2013)  9(7)   e1003663  
[PubMed ID = 23935518]  [RRC reference
Van der Heiden E, Delmarcelle M, Lebrun S, Freichels R, Brans A, Vastenavond CM, Galleni M, Joris B.
A pathway closely related to the (D)-tagatose pathway of gram-negative enterobacteria identified in the gram-positive bacterium Bacillus licheniformis.
Appl. Environ. Microbiol.  (2013)  79(11)   3511-5  
[PubMed ID = 23524682]  [RRC reference
Kurihara S, Oda S, Tsuboi Y, Kim HG, Oshida M, Kumagai H, Suzuki H.
gamma-Glutamylputrescine synthetase in the putrescine utilization pathway of Escherichia coli K-12.
J. Biol. Chem.  (2008)  283(29)   19981-90  
[PubMed ID = 18495664]  [RRC reference
ShibataY., Ugumori,C., Takahashi,A., Sekoguchi,A., Maeda,S.
Survey of lysogenic phages in the 72 strains of Escherichia coli collection of reference (ECOR) and identification of a phage derived from the ECOR52 strain.
American Journal of Bioscience  (2014)  2(2)   32-37   [RRC reference
Hasegawa H, Suzuki E, Maeda S.
Horizontal Plasmid Transfer by Transformation in Escherichia coli: Environmental Factors and Possible Mechanisms.
Front Microbiol  (2018)  9   2365  
[PubMed ID = 30337917]  [RRC reference
Kumar CM, Khare G, Srikanth CV, Tyagi AK, Sardesai AA, Mande SC.
Facilitated oligomerization of mycobacterial GroEL: evidence for phosphorylation-mediated oligomerization.
J. Bacteriol.  (2009)  191(21)   6525-38  
[PubMed ID = 19717599]  [RRC reference
Engl C, Jovanovic G, Lloyd LJ, Murray H, Spitaler M, Ying L, Errington J, Buck M.
In vivo localizations of membrane stress controllers PspA and PspG in Escherichia coli.
Mol. Microbiol.  (2009)  73(3)   382-96  
[PubMed ID = 19555453]  [RRC reference
Bekker M, de Vries S, Ter Beek A, Hellingwerf KJ, de Mattos MJ.
Respiration of Escherichia coli can be fully uncoupled via the nonelectrogenic terminal cytochrome bd-II oxidase.
J. Bacteriol.  (2009)  191(17)   5510-7  
[PubMed ID = 19542282]  [RRC reference
Rankin LD, Bodenmiller DM, Partridge JD, Nishino SF, Spain JC, Spiro S.
Escherichia coli NsrR regulates a pathway for the oxidation of 3-nitrotyramine to 4-hydroxy-3-nitrophenylacetate.
J. Bacteriol.  (2008)  190(18)   6170-7  
[PubMed ID = 18658270]  [RRC reference
Kim JH, Lim BC, Yeom SJ, Kim YS, Kim HJ, Lee JK, Lee SH, Kim SW, Oh DK.
Differential selectivity of the Escherichia coli cell membrane shifts the equilibrium for the enzyme-catalyzed isomerization of galactose to tagatose.
Appl. Environ. Microbiol.  (2008)  74(8)   2307-13  
[PubMed ID = 18263746]  [RRC reference
Doan N, Gettins PG.
alpha-Macroglobulins are present in some gram-negative bacteria: characterization of the alpha2-macroglobulin from Escherichia coli.
J. Biol. Chem.  (2008)  283(42)   28747-56  
[PubMed ID = 18697741]  [RRC reference
Sakai T, Nakamura N, Umitsuki G, Nagai K, Wachi M.
Increased production of pyruvic acid by Escherichia coli RNase G mutants in combination with cra mutations.
Appl. Microbiol. Biotechnol.  (2007)  76(1)   183-92  
[PubMed ID = 17483940]  [RRC reference
Oshima T, Wada C, Kawagoe Y, Ara T, Maeda M, Masuda Y, Hiraga S, Mori H.
Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli.
Mol. Microbiol.  (2002)  45(3)   673-95  
[PubMed ID = 12139615]  [RRC reference
Kusumoto M, Suzuki R, Nishiya Y, Okitsu T, Oka M.
Host-dependent activation of IS1203v excision in Shiga toxin-producing Escherichia coli.
J. Biosci. Bioeng.  (2004)  97(6)   406-11  
[PubMed ID = 16233651]  [RRC reference
Sato A, Kobayashi G, Hayashi H, Yoshida H, Wada A, Maeda M, Hiraga S, Takeyasu K, Wada C.
The GTP binding protein Obg homolog ObgE is involved in ribosome maturation.
Genes Cells  (2005)  10(5)   393-408  
[PubMed ID = 15836769]  [RRC reference
Nakashima N, Tamura T.
Conditional gene silencing of multiple genes with antisense RNAs and generation of a mutator strain of Escherichia coli.
Nucleic Acids Res.  (2009)  37(15)   e103  
[PubMed ID = 19515932]  [RRC reference
Abdallah J, Kern R, Malki A, Eckey V, Richarme G.
Cloning, expression, and purification of the general stress protein YhbO from Escherichia coli.
Protein Expr. Purif.  (2006)  47(2)   455-60  
[PubMed ID = 16380269]  [RRC reference
Naseem R, Wann KT, Holland IB, Campbell AK.
ATP regulates calcium efflux and growth in E. coli.
J. Mol. Biol.  (2009)  391(1)   42-56  
[PubMed ID = 19481094]  [RRC reference
Nord S, Bylund GO, Lövgren JM, Wikström PM.
The RimP protein is important for maturation of the 30S ribosomal subunit.
J. Mol. Biol.  (2009)  386(3)   742-53  
[PubMed ID = 19150615]  [RRC reference
Culture Condition L broth at 37C
Other Remarks E. coli strain K12 prototroph
sequence (FASTQ format)
http://trace.ddbj.nig.ac.jp/DRASearch/run?acc=DRR058060
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