mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 3,645 | G→A | W282* (TGG→TAG) | thrB → | homoserine kinase |
| RA | 71,170 | T→C | S262P (TCG→CCG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| RA | 81,044 | C→T | L305L (CTG→CTA) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 81,102 | G→A | S286L (TCG→TTG) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 85,203 | C→T | P279L (CCG→CTG) | leuO → | DNA‑binding transcriptional dual regulator LeuO |
| RA | 154,182 | C→T | L415L (CTG→CTA) | htrE ← | putative fimbrial usher protein HtrE |
| RA | 156,068 | A→G | V45A (GTA→GCA) | yadV ← | putative fimbrial chaperone YadV |
| RA | 223,560 | T→A | intergenic (+152/‑211) | gmhB → / → rrsH | D‑glycero‑beta‑D‑manno‑heptose‑1,7‑bisphosphate 7‑phosphatase/16S ribosomal RNA |
| RA | 246,985 | C→T | P92S (CCG→TCG) | yafL → | NlpC/P60 family protein YafL |
| MC JC | 253,287 | Δ20,668 bp | IS5‑mediated | pepD–[ykfC] | 27 genes pepD, gpt, frsA, crl, insB9, insA9, crl, phoE, proB, proA, thrW, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, yafZ, ykfA, perR, insN, insI1, insN, eyeA, [ykfC] |
| RA | 284,535 | T→G | A445A (GCT→GCG) | yagF → | D‑xylonate dehydratase |
| RA | 290,892 | C→T | M87I (ATG→ATA) | insB3 ← | IS1 family protein InsB |
| RA | 292,019 | C→T | L174L (CTA→TTA) | yagJ → | protein YagJ |
| RA | 309,381 | C→T | D216N (GAT→AAT) | ecpB ← | putative fimbrial chaperone EcpB |
| RA | 309,985 | T→A | G14G (GGA→GGT) | ecpB ← | putative fimbrial chaperone EcpB |
| JC JC | 362,204 | IS1 (–) +9 bp | coding (968‑976/1254 nt) | lacY ← | lactose permease |
| MC JC | 392,967 | Δ11,356 bp | IS3‑mediated | yaiT–[dgcC] | yaiT, iprA, ampH, sbmA, yaiW, yaiY, yaiZ, ddlA, iraP, phoA, psiF, [dgcC] |
| RA | 410,666 | C→T | P175S (CCT→TCT) | mak → | fructokinase |
| RA | 421,027 | C→T | R14R (CGC→CGT) | proY → | putative transporter ProY |
| RA | 456,711 | C→G | P12R (CCC→CGC) | clpP → | ATP‑dependent Clp protease proteolytic subunit |
| RA | 472,849 | A→G | G84G (GGA→GGG) | glnK → | nitrogen regulatory protein PII‑2 |
| RA | 495,622 | C→T | T168I (ACC→ATC) | htpG → | chaperone protein HtpG |
| RA | 534,742 | G→A | G276D (GGT→GAT) | gcl → | glyoxylate carboligase |
| RA | 547,891 | C→T | L404L (CTC→CTT) | fdrA → | putative oxamate carbamoyltransferase FdrA |
| MC JC | 575,786 | Δ3,398 bp | IS5‑mediated | [nmpC]–borD | [nmpC], essD, rrrD, rzpD, rzoD, borD |
| RA | 582,597 | C→T | intergenic (+500/‑278) | tfaD → / → tfaX | putative tail fiber assembly protein TfaD/protein TfaX |
| RA | 694,941 | G→A | L5L (CTC→CTT) | miaB ← | isopentenyl‑adenosine A37 tRNA methylthiolase |
| RA | 696,470 | C→T | noncoding (35/75 nt) | glnX ← | tRNA‑Gln |
| JC JC | 771,310 | IS1 (+) +9 bp | intergenic (+699/‑140) | mngB → / → cydA | alpha‑mannosidase/cytochrome bd‑I subunit 1 |
| RA | 771,334 | C→T | intergenic (+723/‑124) | mngB → / → cydA | alpha‑mannosidase/cytochrome bd‑I subunit 1 |
| RA | 780,624 | C→T | noncoding (71/76 nt) | lysT → | tRNA‑Lys |
| RA | 789,580 | C→A | E134* (GAA→TAA) | galK ← | galactokinase |
| RA | 790,832 | Δ1 bp | coding (198/1047 nt) | galT ← | galactose‑1‑phosphate uridylyltransferase |
| RA | 822,527 | C→T | E405K (GAA→AAA) | clsB ← | cardiolipin synthase B |
| RA | 883,396 | C→T | intergenic (‑8/‑277) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| RA | 884,892 | C→T | S407F (TCT→TTT) | mdfA → | multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| RA | 908,169 | C→T | R38R (AGG→AGA) | ybjT ← | putative NAD(P)‑binding protein YbjT |
| RA | 909,990 | C→T | E354K (GAG→AAG) | poxB ← | pyruvate oxidase |
| RA | 922,954 | G→T | A14A (GCG→GCT) | clpS → | specificity factor for ClpA‑ClpP chaperone‑protease complex |
| RA | 1,123,823 | 2 bp→AG | coding (231‑232/648 nt) | grxB ← | reduced glutaredoxin 2 |
| RA | 1,147,792 | T→A | S58T (TCG→ACG) | plsX → | putative phosphate acyltransferase |
| RA | 1,169,836 | A→G | L180P (CTG→CCG) | ldtC ← | L,D‑transpeptidase LdtC |
| RA | 1,189,980 | A→G | T156T (ACT→ACC) | phoP ← | DNA‑binding transcriptional dual regulator PhoP |
| RA | 1,194,922 | G→A | T10T (ACC→ACT) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,277 | C→T | N385N (AAC→AAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,280 | G→C | A386A (GCG→GCC) | icd → | isocitrate dehydrogenase |
| RA | 1,196,283 | A→G | K387K (AAA→AAG) | icd → | isocitrate dehydrogenase |
| RA | 1,253,002 | C→T | intergenic (+17/+83) | dhaR → / ← ycgV | DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV |
| MC JC | 1,299,499 | Δ1,199 bp | insH21 | insH21 | |
| JC JC | 1,300,894 | IS1 (+) +8 bp | intergenic (+347/‑281) | insH21 → / → oppA | IS5 family transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,301,992 | A→T | N271Y (AAT→TAT) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,317,162 | G→A | P21S (CCT→TCT) | trpA ← | tryptophan synthase subunit alpha |
| MC JC | 1,321,416 | Δ1,470 bp | coding (62‑1531/1563 nt) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,331,059 | 2 bp→AT | coding (12‑13/2598 nt) | topA → | DNA topoisomerase 1 |
| RA | 1,337,394 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydratase 1 |
| RA | 1,358,859 | T→C | Y110C (TAT→TGT) | puuP ← | putrescine:H(+) symporter PuuP |
| RA | 1,405,758 | G→A | intergenic (‑7/‑221) | mcaS ← / → smrA | small regulatory RNA McaS/DNA endonuclease SmrA |
| RA | 1,428,150 | G→A | L193L (CTG→TTG) | insH5 ← | IS5 family transposase and trans‑activator |
| RA | 1,489,491 | G→A | L420L (CTG→CTA) | aldA → | aldehyde dehydrogenase A |
| RA | 1,497,385 | 4 bp→CAA | coding (530‑533/1656 nt) | opgD → | glucans biosynthesis protein D |
| RA | 1,629,247 | C→T | I11I (ATC→ATT) | ydfZ → | putative selenoprotein YdfZ |
| RA | 1,643,679 | A→T | L209Q (CTG→CAG) | ydfU ← | protein YdfU |
| JC JC | 1,652,229 | IS2 (–) +5 bp | intergenic (+2244/+495) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| RA | 1,667,460 | G→A | Q369* (CAG→TAG) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| RA | 1,748,841 | C→T | R240K (AGA→AAA) | ydhT ← | uncharacterized protein YdhT |
| RA | 1,751,024 | C→A | intergenic (‑11/+53) | ydhX ← / ← ydhW | putative 4Fe‑4S ferredoxin‑like protein YdhX/uncharacterized protein YdhW |
| RA | 1,848,300 | 2 bp→TT | coding (376‑377/552 nt) | ydjA ← | putative oxidoreductase YdjA |
| JC JC | 1,879,829 | Δ1 bp :: IS186 (+) +6 bp :: Δ1 bp | coding (115‑120/360 nt) | yeaR ← | DUF1971 domain‑containing protein YeaR |
| RA | 1,894,839 | T→C | L12P (CTC→CCC) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,962,172 | C→T | A67A (GCC→GCT) | yecT → | protein YecT |
| RA | 1,996,243 | G→A | S197L (TCA→TTA) | sdiA ← | DNA‑binding transcriptional dual regulator SdiA |
| RA | 2,040,433 | C→A | A319D (GCC→GAC) | msrP → | protein‑L‑methionine sulfoxide reductase catalytic subunit MsrP |
| RA | 2,041,278 | G→A | intergenic (+160/‑97) | msrQ → / → zinT | membrane‑bound flavocytochrome MsrQ/metal‑binding protein ZinT |
| RA | 2,052,885 | G→A | intergenic (+871/‑758) | yeeJ → / → shiA | inverse autotransporter adhesin/shikimate:H(+) symporter |
| RA | 2,143,828 | C→T | P188L (CCA→CTA) | dgcE → | putative diguanylate cyclase DgcE |
| RA | 2,173,363 | Δ2 bp | intergenic (‑490/+918) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| RA | 2,188,087 | T→C | T110A (ACG→GCG) | yehA ← | putative fimbrial adhesin YehA |
| RA | 2,254,795 | G→A | A131V (GCG→GTG) | rihB ← | pyrimidine‑specific ribonucleoside hydrolase RihB |
| RA | 2,281,282 | G→A | Q217Q (CAG→CAA) | radD → | putative DNA repair helicase RadD |
| RA | 2,304,522 | 2 bp→TC | intergenic (+129/+585) | eco → / ← mqo | serine protease inhibitor ecotin/malate:quinone oxidoreductase |
| RA | 2,304,537 | A→G | intergenic (+144/+571) | eco → / ← mqo | serine protease inhibitor ecotin/malate:quinone oxidoreductase |
| RA | 2,304,540 | C→T | intergenic (+147/+568) | eco → / ← mqo | serine protease inhibitor ecotin/malate:quinone oxidoreductase |
| RA | 2,304,549 | C→T | intergenic (+156/+559) | eco → / ← mqo | serine protease inhibitor ecotin/malate:quinone oxidoreductase |
| RA | 2,335,464 | G→A | A394V (GCG→GTG) | yfaA ← | DUF2138 domain‑containing protein YfaA |
| RA | 2,374,594 | C→T | C137Y (TGC→TAC) | menE ← | o‑succinylbenzoate‑‑CoA ligase |
| RA | 2,384,808 | C→T | K305K (AAG→AAA) | yfbK ← | IPR002035/DUF3520 domain‑containing protein YfbK |
| RA | 2,410,419 | G→A | L312L (CTG→TTG) | yfbS ← | putative transporter YfbS |
| RA | 2,417,352 | G→A | G91D (GGC→GAC) | yfcC → | putative transporter YfcC |
| RA | 2,444,820 | C→T | A247A (GCG→GCA) | yfcA ← | putative transporter YfcA |
| RA | 2,447,079 | G→A | A132V (GCC→GTC) | aroC ← | chorismate synthase |
| RA | 2,471,453 | G→A | T22M (ACG→ATG) | yfdK ← | putative tail fiber assembly protein YfdK |
| RA | 2,484,827 | C→T | L152F (CTT→TTT) | evgS → | sensor histidine kinase EvgS |
| RA | 2,522,742 | G→A | A415V (GCG→GTG) | xapB ← | xanthosine:H(+) symporter XapB |
| RA | 2,553,552 | C→T | R110W (CGG→TGG) | hemF → | coproporphyrinogen III oxidase |
| RA | 2,564,496 | G→T | intergenic (+124/‑27) | yffR → / → yffS | uncharacterized protein YffR/uncharacterized protein YffS |
| RA | 2,566,734 | G→A | P51S (CCG→TCG) | eutA ← | ethanolamine ammonia‑lyase reactivase EutA |
| RA | 2,567,321 | G→A | P263S (CCT→TCT) | eutH ← | putative ethanolamine permease EutH |
| RA | 2,576,833 | G→A | F515F (TTC→TTT) | maeB ← | malate dehydrogenase (oxaloacetate‑decarboxylating) (NADP(+)) |
| RA | 2,583,790 | G→A | A579V (GCG→GTG) | aegA ← | putative oxidoreductase AegA |
| RA | 2,587,666 | C→T | T24T (ACC→ACT) | acrD → | multidrug efflux pump RND permease AcrD |
| RA | 2,637,689 | G→A | L322L (CTG→TTG) | bamB ← | outer membrane protein assembly factor BamB |
| RA | 2,652,867 | G→A | G125D (GGC→GAC) | sseA → | 3‑mercaptopyruvate sulfurtransferase |
| RA | 2,654,800 | G→A | A45V (GCT→GTT) | sseB ← | protein SseB |
| RA | 2,655,820 | G→A | P180L (CCA→CTA) | pepB ← | aminopeptidase B |
| RA | 2,662,928 | G→A | V132V (GTC→GTT) | trmJ ← | tRNA Cm32/Um32 methyltransferase |
| RA | 2,675,137 | G→A | P209S (CCG→TCG) | yphC ← | putative zinc‑binding dehydrogenase YphC |
| RA | 2,724,285 | G→A | R53Q (CGG→CAG) | yfiM → | DUF2279 domain‑containing protein YfiM |
| RA | 2,729,586 | G→A | intergenic (‑142/+30) | gltW ← / ← rrsG | tRNA‑Glu/16S ribosomal RNA |
| RA | 2,779,623 | C→T | S1035N (AGC→AAC) | ypjA ← | adhesin‑like autotransporter YpjA |
| RA | 2,783,462 | C→T | intergenic (‑736/+176) | ypjA ← / ← ypjB | adhesin‑like autotransporter YpjA/DUF5508 domain‑containing protein YpjB |
| RA | 2,823,537 | A→G | L78P (CTG→CCG) | recA ← | DNA recombination/repair protein RecA |
| RA | 2,838,241 | G→A | intergenic (‑136/+13) | hydN ← / ← ascG | putative electron transport protein HydN/DNA‑binding transcriptional repressor AscG |
| RA | 2,926,772 | C→A | G155G (GGC→GGA) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| RA | 3,025,601 | (T)5→4 | coding (1251/1401 nt) | xanQ → | xanthine:H(+) symporter XanQ |
| RA | 3,070,858 | T→G | K129N (AAA→AAC) | fbaA ← | fructose‑bisphosphate aldolase class II |
| RA | 3,087,508 | C→T | P268L (CCA→CTA) | metK → | methionine adenosyltransferase |
| RA | 3,167,148 | G→A | H191Y (CAT→TAT) | ygiS ← | putative deoxycholate binding periplasmic protein |
| RA | 3,207,549 | Δ1 bp | coding (179/606 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,279,276 | C→G | F121L (TTC→TTG) | kbaZ → | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| RA | 3,296,481 | G→A | V25M (GTG→ATG) | dolP → | division and outer membrane stress‑associated lipid‑binding lipoprotein |
| RA | 3,329,743 | G→T | D261Y (GAT→TAT) | dacB → | peptidoglycan DD‑endopeptidase DacB |
| MC JC | 3,360,851 | Δ4,705 bp | IS5‑mediated | gltF–[yhcE] | gltF, yhcA, yhcD, [yhcE] |
| RA | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
| RA | 3,411,689 | G→T | E13* (GAA→TAA) | yhdJ → | DNA adenine methyltransferase |
| RA | 3,433,900 | C→T | L71L (CTA→TTA) | def → | peptide deformylase |
| RA | 3,465,502 | G→A | E141K (GAG→AAG) | gspM → | Type II secretion system protein GspM |
| RA | 3,486,502 | C→T | T128I (ACT→ATT) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,486,542 | G→A | T141T (ACG→ACA) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,486,565 | T→G | L149R (CTG→CGG) | crp → | DNA‑binding transcriptional dual regulator CRP |
| RA | 3,511,466 | C→T | V293V (GTG→GTA) | yhfZ ← | putative DNA‑binding transcriptional regulator YhfZ |
| RA | 3,524,913 | C→T | F681F (TTC→TTT) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,555,047 | 2 bp→TG | coding (1963‑1964/2706 nt) | malT → | DNA‑binding transcriptional activator MalT |
| MC JC | 3,559,895 | Δ7 bp | intergenic (+29/+721) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| RA | 3,647,428 | C→T | A377V (GCG→GTG) | gor → | glutathione reductase (NADPH) |
| RA | 3,685,480 | C→T | E47K (GAA→AAA) | pdeK ← | c‑di‑GMP phosphodiesterase PdeK |
| RA | 3,707,947 | C→A | intergenic (‑242/+669) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,719,429 | G→A | intergenic (‑385/‑49) | yiaF ← / → yiaG | DUF3053 domain‑containing protein YiaF/putative DNA‑binding transcriptional regulator YiaG |
| RA | 3,725,176 | T→G | E48A (GAG→GCG) | glyQ ← | glycine‑‑tRNA ligase subunit alpha |
| RA | 3,729,440 | 2 bp→TT | noncoding (105‑106/160 nt) | xylZ ← | small RNA XylZ |
| RA | 3,730,560 | C→T | W69* (TGG→TAG) | xylA ← | xylose isomerase |
| RA | 3,770,539 | C→T | V281M (GTG→ATG) | yibH ← | inner membrane protein YibH |
| RA | 3,773,173 | Δ1 bp | coding (893/1914 nt) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| RA | 3,773,176 | C→T | S299F (TCT→TTT) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,926,991 | G→A | L5L (CTG→TTG) | asnC ← | DNA‑binding transcriptional dual regulator AsnC |
| RA | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| JC JC | 4,044,847 | IS5 (+) +4 bp | coding (649‑652/1431 nt) | yihF → | DUF945 domain‑containing protein YihF |
| JC JC | 4,069,146 | IS1 (–) +9 bp | coding (123‑131/2037 nt) | yihQ ← | sulfoquinovosidase |
| JC JC | 4,124,494 | IS2 (+) +5 bp | intergenic (‑38/+114) | cytR ← / ← priA | DNA‑binding transcriptional repressor CytR/primosomal protein N' |
| RA | 4,166,554 | C→T | intergenic (+269/‑105) | murI → / → rrsB | glutamate racemase/16S ribosomal RNA |
| RA | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,322,288 | A→G | F45F (TTT→TTC) | phnF ← | putative transcriptional regulator PhnF |
| RA | 4,325,000 | C→T | G56S (GGC→AGC) | phnC ← | phosphonate/phosphate ABC transporter ATP binding subunit |
| RA | 4,325,644 | C→T | S33N (AGC→AAC) | yjdN ← | PF06983 family protein YjdN |
| RA | 4,331,890 | C→T | L463L (CTC→CTT) | proP → | osmolyte:H(+) symporter ProP |
| RA | 4,437,890 | C→T | Q62* (CAG→TAG) | ytfI → | protein YtfI |
| RA | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| RA | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| RA | 4,476,605 | G→A | S390N (AGC→AAC) | yjgL → | protein YjgL |
| RA | 4,489,016 | C→T | E350K (GAA→AAA) | yjgR ← | DUF853 domain‑containing protein YjgR |
| RA | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| JC JC | 4,542,042 | IS1 (+) +8 bp | coding (6‑13/597 nt) | fimE → | regulator for fimA |
| RA | 4,549,043 | T→G | L79R (CTG→CGG) | fimH → | type 1 fimbriae D‑mannose specific adhesin |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196292 | 1211454 | 15163 | 40 [39] | [37] 40 | [icd]–mcrA | [icd],C0293,ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,ymfN,ymfR,beeE,ymfQ,ycfK,tfaP,tfaE,pinE,mcrA |
| * | * | ÷ | NC_000913 | 3423799–3424233 | 3424451–3424238 | 6–653 | 40 [39] | [39] 40 | [rrlD] | [rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1978502 | 4 (0.040) | 139 (1.350) | 84/582 | 0.0 | 98.6% | intergenic (‑305/+16) | flhD/insB5 | DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB |
| ? | NC_000913 | 1979279 = | 0 (0.000) | intergenic (‑64/‑474) | insA5/uspC | IS1 family protein InsA/universal stress protein C | |||||