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Species Database Institution keyword
Drosophila A Database of Drosophila Genes & Genomes
urlhttp://flybase.org/		 Center for Genomics,Proteomics and Bio informatics(CGPB)  
Rice About Next-Gen Sequence Databases
urlhttp://mpss.udel.edu/#rice		 Blake Meyers Pamela Green Dept. of Plant &Soil Sciences Delaware Biotech Institute Univ. of Delaware  
Arabidopsis Arabidopsis Information Portal
urlhttps://www.araport.org/		 collaborative project  
Forest Tree Breeding Arborea
urlhttp://www.arborea.ulaval.ca/en/		 Université Laval  
Rice Arizona Genomics Institute (AGI)
urlhttp://www.genome.arizona.edu/		 Arizona Genomic Institute & Computational Laboratory  
Rice ASPGC
urlhttp://genome.sinica.edu.tw/		 Academia Sinica Plant Genome Center (Taiwan)  
B.subtilis Bacillus subtilis Genome Database
urlhttp://bacillus.genome.jp/		 GenomeNet  
B.subtilis Bacillus subtilis Genome Database(BSORF)
urlhttp://bacillus.genome.ad.jp/		 GenomeNet for the B. subtilis community in Japan  
Barley Barley DB
urlhttp://shigen.nig.ac.jp/barley/		 National Institute of Genetics  
Drosophila Berkeley Drosophila Genome Project
urlhttp://www.fruitfly.org/		 Consortium of the Drosophila Genome Center  
Rice BGI Rise Rice Genome Database
urlhttp://rice.genomics.org.cn/rice/index2.jsp		 Beijing Genomics Institute (China)  
C.elegans Caenorhabditis genome sequencing and analysis at the Sanger Institute
urlhttp://www.sanger.ac.uk/research/projects/caenorhabditisgenomics/		 Sanger Center  
Birds Chicken Variation Database
urlhttp://chicken.genomics.org.cn/		 Bejing Genomics Institute  
Algae (plants), Algae (Microbe) Chlamy Connection
urlhttp://www.chlamy.org/		 Duke University  
Tunicata/Chordata Ciona savignyi Database
urlhttp://www.broadinstitute.org/annotation/ciona/		 Broad Institute  
E.coli Colibri
urlhttp://genolist.pasteur.fr/Colibri/		 Intstitut Pasteur  
Actinomycetes Comprehensive Microbial Resource (CMR)
urlhttp://www.jcvi.org/cms/research/past-projects/cmr/overview/?database=gmt		 TIGR  
Actinomycetes Corynebacterium diphtheriae
urlhttp://www.sanger.ac.uk/resources/downloads/bacteria/corynebacterium-diphtheriae.html		 The Wellcome Trust Sanger Institute  
Mouse, Human COXPRESdb (co-expressed gene database)
urlhttp://coxpresdb.jp/		 The Institute of Medical Science, The University of Tokyo  
Rice CSRDB: Cereal small RNAs Database
urlhttp://sundarlab.ucdavis.edu/smrnas/		 NSF,UCDAVIS,USC  
Plant.Others Cucurbit Genomics Database
urlhttp://www.icugi.org/cgi-bin/ICuGI/index.cgi		 BARD grants and the International Cucurbit Genomics Initiative (ICuGI)  
Plant.Others, Algae (plants), Microbe.Others cyanobase
urlhttp://genome.microbedb.jp/cyanobase/		 Kazusa DNA Research Institute  
E.coli CyberCell Database: CCDB
urlhttp://ccdb.wishartlab.com/CCDB/		 Institute for Biomolecular Design Porject CyberCell  
Forest Tree Breeding Dendrome Project
urlhttp://dendrome.ucdavis.edu/		 UC Davis  
Dictyostelium dictyBase
urlhttp://dictybase.org/		 Northwestern University  
Others DNA Book
urlhttp://134.160.84.27/DNA-Book/		 RIKEN,Japan & JST  
Drosophila DrosDel: An isogenic deficiency kit for Drosophila melanogaster
urlhttp://www.drosdel.org.uk/		 Department of Genetics, University of Cambridge, UK  
E.coli E.coli database collection - ECDC
urlhttp://www.uni-giessen.de/ecoli/ECDC/ecdc.htm		 Justus-Liebig-University　（Germany)  
E.coli E.coli Genome Project
urlhttp://www.genome.wisc.edu		 University of Wisconsin-Madison  
Mouse EGTC（Database for the Exchangeable Gene Trap Clones）
urlhttp://egtc.jp/action/main/index		 Institute of Resource Development and Analysis,　Kumamoto University  
Mouse Ensembl Genome Browser
urlhttp://asia.ensembl.org/Mus_musculus/Info/Index?redirect=no		 Ensembl  
Mouse Ensembl genome browser 79: Mus musculus - Description
urlhttp://asia.ensembl.org/Mus_musculus/Info/Index?redirect=no		 MGSC(Mouse Genome Sequencing Consortium)  
Human Ensembl genome browser 80: Homo sapiens
urlhttp://asia.ensembl.org/Homo_sapiens/Info/Index?redirect=no		 Ensembl  
Medakafish Ensembl Medaka
urlhttp://asia.ensembl.org/Oryzias_latipes/Info/Index?redirect=no		 EBI and WTSI  
Rat Ensembl Rat
urlhttp://asia.ensembl.org/Rattus_norvegicus/Info/Index?redirect=no		 Ensembl  
Amphibian Ensembl Xenopus
urlhttp://asia.ensembl.org/Xenopus_tropicalis/Info/Index?redirect=no		 Ensembl  
Zebrafish Ensembl Zebrafish
urlhttp://asia.ensembl.org/Danio_rerio/Info/Index?redirect=no		 The Wellcom Trust Sanger Institute  
Zebrafish Ensembl Zebrafish
urlhttp://asia.ensembl.org/Danio_rerio/Info/Index?redirect=no		 Ensembl  
Amphibian Ensembl　Xenopus
urlhttp://asia.ensembl.org/Xenopus_tropicalis/Info/Index?redirect=no		 The Wellcom Trust Sanger Institute  
B.subtilis Entamoeba histolytica
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=27		 NCBI  
E.coli Escherichia coli O157:H7 Sakai
urlhttp://genome.bio.titech.ac.jp/bacteria/o157/		 Nara Institute of Science and Technology  
E.coli Escherichia coli Transcription Factor Binding Sites
urlhttp://bayesweb.wadsworth.org/binding_sites/index.html		 the Biometrics Laboratory of Wadsworth Center  
Pufferfish Fugu Genome Project
urlhttp://www.fugu-sg.org/		 Fugu Genomics Project  
Yeast Fungal Genomics
urlhttp://www.broadinstitute.org/scientific-community/science/projects/fungal-genome-initiative/fungal-genomics		 Broad Institute laboratories  
Drosophila GDP Screen Database
urlhttp://flypush.imgen.bcm.tmc.edu/pscreen/		 Project of the Bellen/Hoskins/Rubin/Spradling labs.  
Mouse Genome
urlhttp://www.ncbi.nlm.nih.gov/genome?term=mus%20musculus		 NCBI  
Rice Genome - NCBI
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=10013		 NCBI  
Rice Genome - NCBI
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=11623		 NCBI  
Actinomycetes Genome Project of Streptomyces avermitilis
urlhttp://avermitilis.ls.kitasato-u.ac.jp/		 Kitasato University  
Yeast Genome Statistics
urlhttp://www.pombase.org/status/statistics		 The WellcomeTrust Sanger Institute