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Species Database Institution keyword
Drosophila A Database of Drosophila Genes & Genomes
urlhttp://flybase.org/		 Center for Genomics,Proteomics and Bio informatics(CGPB)  
Rice About Next-Gen Sequence Databases
urlhttp://mpss.udel.edu/#rice		 Blake Meyers Pamela Green Dept. of Plant &Soil Sciences Delaware Biotech Institute Univ. of Delaware  
Forest Tree Breeding Arborea
urlhttp://www.arborea.ulaval.ca/en/		 Université Laval  
Rice Arizona Genomics Institute (AGI)
urlhttp://www.genome.arizona.edu/		 Arizona Genomic Institute & Computational Laboratory  
Arabidopsis, Rice ASIP Home
urlhttp://www.plantgdb.org/ASIP/ 		University of Minnesota,Department of Genentics, Devlopement and Cell Biology  
Algae (plants), Algae (Microbe) Chlamy Connection
urlhttp://www.chlamy.org/		 Duke University  
Wheat CMap for Wheat
urlhttp://map2.lab.nig.ac.jp/cmap/		 CMAP  
E.coli Colibri
urlhttp://genolist.pasteur.fr/Colibri/		 Intstitut Pasteur  
Rice CSRDB: Cereal small RNAs Database
urlhttp://sundarlab.ucdavis.edu/smrnas/		 NSF,UCDAVIS,USC  
Plant.Others Cucurbit Genomics Database
urlhttp://www.icugi.org/cgi-bin/ICuGI/index.cgi		 BARD grants and the International Cucurbit Genomics Initiative (ICuGI)  
Plant.Others CUGI
urlhttp://www.genome.clemson.edu/		 Clemson University Genomics Institute  
E.coli CyberCell Database: CCDB
urlhttp://ccdb.wishartlab.com/CCDB/		 Institute for Biomolecular Design Porject CyberCell  
Dictyostelium dictyBase
urlhttp://dictybase.org/		 Northwestern University  
Drosophila DrosDel: An isogenic deficiency kit for Drosophila melanogaster
urlhttp://www.drosdel.org.uk/		 Department of Genetics, University of Cambridge, UK  
E.coli E.coli database collection - ECDC
urlhttp://www.uni-giessen.de/ecoli/ECDC/ecdc.htm		 Justus-Liebig-University　（Germany)  
Mouse EGTC（Database for the Exchangeable Gene Trap Clones）
urlhttp://egtc.jp/action/main/index		 Institute of Resource Development and Analysis,　Kumamoto University  
Medakafish Ensembl Medaka
urlhttp://asia.ensembl.org/Oryzias_latipes/Info/Index?redirect=no		 EBI and WTSI  
Zebrafish Ensembl Zebrafish
urlhttp://asia.ensembl.org/Danio_rerio/Info/Index?redirect=no		 The Wellcom Trust Sanger Institute  
B.subtilis Entamoeba histolytica
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=27		 NCBI  
E.coli Escherichia coli O157:H7 Sakai
urlhttp://genome.bio.titech.ac.jp/bacteria/o157/		 Nara Institute of Science and Technology  
E.coli Escherichia coli Transcription Factor Binding Sites
urlhttp://bayesweb.wadsworth.org/binding_sites/index.html		 the Biometrics Laboratory of Wadsworth Center  
Pufferfish Genetic Map of Fugu (the Tiger Pufferfish)
urlhttp://www.se.a.u-tokyo.ac.jp/Fugu-Map/map.html		 Fisheries Laboratory, Graduate School of Agricultural and Life Sciences, The University of Tokyo.  
Rice Genome - NCBI
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=11623		 NCBI  
Actinomycetes Genome Project of Streptomyces avermitilis
urlhttp://avermitilis.ls.kitasato-u.ac.jp/		 Kitasato University  
Yeast Genome Statistics
urlhttp://www.pombase.org/status/statistics		 The WellcomeTrust Sanger Institute  
Barley, Wheat, Plant.Others GrainGenes
urlhttp://wheat.pw.usda.gov/GG2/index.shtml		 ARS, USDA  
Wheat GrainGenes wEST-SQL Database
urlhttp://wheat.pw.usda.gov/wEST/		 US Department of Agriculture. (USDA)  
Rice, Wheat Gramene: A comparative resource for plants
urlhttp://www.gramene.org/		 USDA-ARS, Cold Spring Harbor, Conrnell University  
Yeast Helmholtz Zentrum Munchen
urlhttp://www.helmholtz-muenchen.de/en/ibis/institute/groups/fungal-microbial-genomics/resources/index.html		 MIPS  
Rice INtegrated rice genome Explorer (INE)
urlhttp://ine.dna.affrc.go.jp/giot/		 National Institute of Agrobiological Science  
Rice Knowledge-based Oryza Molecular biological Encyclopedia
urlhttp://cdna01.dna.affrc.go.jp/cDNA/		 National Institute of Agrobiological Sciences  
Rice Lactobacillus suebicus - Genome - NCBI
urlhttp://www.ncbi.nlm.nih.gov/genome?cmd=Retrieve&dopt=Overview&list_uids=11591		 NCBI  
E.coli Linkage Map of Escherichia coli K-12, Edition 10: The Physical Map
urlhttp://mmbr.asm.org/content/62/3/985.abstract		 by Kenneth E. Rudd  
E.coli Linkage Map of Escherichia coli K-12, Edition 10: The Traditional Map
urlhttp://mmbr.asm.org/content/62/3/814.abstract		 by Mary K.B.Berlyn  
Medakafish M-Base(Medaka Genome Database)
urlhttp://mbase.nig.ac.jp/mbase/medaka_top.html		 University of Tokyo  
Plant.Others Maize Genetics and Genomics Database
urlhttp://www.maizegdb.org/		 USDA Agricultural Reserach Service  
E.coli MBGD
urlhttp://mbgd.genome.ad.jp/		 The University of Tokyo  
Beans medicago.org
urlhttp://medicago.org/genome/index.php		 US/EU Medicago truncatula genome sequencing project  
Rice MGOS Community Database
urlhttp://www.mgosdb.org/ 		PIs Cari Soderlund (UA), Marc Orbach (UA), and Barbara Valent (KSU)  
B.subtilis MICrobial Advanced Database Organization
urlhttp://genome.jouy.inra.fr/cgi-bin/micado/index.cgi		 Institut National de la Recherche Agronomique(INRA)  
Microbe.Others Microbial Genome Database for Comparative Analysis
urlhttp://mbgd.genome.ad.jp/		 JSPS, BIRD-JST  
Beans, Plant.Others miyakogusa.jp
urlhttp://www.kazusa.or.jp/lotus/		 Kazusa DNA Research Institute  
Mouse Mouse Genome Informatics (MGI)
urlhttp://www.informatics.jax.org/		 Jackson Laboratory  
Mouse Mouse Polymophism DB
urlhttp://shigen.nig.ac.jp/mouse/polymorphism/top/top.jsp		 National Institute of Genetics  
Rice OryGenesDB
urlhttp://orygenesdb.cirad.fr/index.html		 Centre de cooperation internationale en recherche agronomique pour le developpement  
Rice Oryzabase
urlhttp://shigen.nig.ac.jp/rice/oryzabase/		 National Institute of Genetics (Japan)  
Rice Oryzabase
urlhttp://shigen.nig.ac.jp/rice/oryzabase/comparativemap/about		 Oryzabase  
E.coli PEC (Profiling of E.coli Chromosome)
urlhttp://shigen.nig.ac.jp/ecoli/pec/		 National Institute of Genetics  
Rice PGAA
urlhttp://idv.sinica.edu.tw/trees/PGAA/PGAA.htm		 Genomics Research Center, Academia Sinica, Taiwan  
E.coli PortEco
urlhttp://porteco.org/		 PortEco consortium