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Species |
Database |
Institution |
keyword |
| Drosophila | A Database of Drosophila Genes & Genomes http://flybase.org/ |
Center for Genomics,Proteomics and Bio informatics(CGPB) |       |
| Drosophila | AAA : 12 Drosophila Genomeshttp://rana.lbl.gov/drosophila/ |
Lawrence Berkeley National Laboratory, University of California, Berkeley, University of California, Davis |  |
| Amphibian | Abteilung Molekulare Embryologiehttp://www.dkfz.de/de/mol_embryology/ |
DFKZ(Deutsches Krebsforschungszentrum) |    |
| Mouse | ALLEN BRAIN ATLAShttp://www.brain-map.org |
Allen Institute for Brain Science |  |
| Tunicata/Chordata | Aniseed - Ascidian Network for In Situ Expression and Embryological Datahttp://www.aniseed.cnrs.fr/ |
ANISEED |  |
| Arabidopsis | Arabidopsis Information Portalhttps://www.araport.org/ |
collaborative project | |
| Forest Tree Breeding | Arboreahttp://www.arborea.ulaval.ca/en/ |
Université Laval |  |
| B.subtilis | Bacillus subtilis Genome Database(BSORF)http://bacillus.genome.ad.jp/ |
GenomeNet for the B. subtilis community in Japan | |
| Yeast | bahlerlabhttp://www.bahlerlab.info/ |
The WellcomeTrust Sanger Institute |   |
| Barley | Barley DBhttp://shigen.nig.ac.jp/barley/ |
National Institute of Genetics |   |
| C.elegans | Caenorhabditis genome sequencing and analysis at the Sanger Institutehttp://www.sanger.ac.uk/research/projects/caenorhabditisgenomics/ |
Sanger Center | |
| Yeast | Cell Cycle Regulated Yeast Geneshttp://genome-www.stanford.edu/cellcycle/ |
Stanford University | |
| Tunicata/Chordata | CIPRO( Ciona intestinalis Protein Database )http://cipro.ibio.jp/current/ |
Japan Science and Technology Agency (JST-BIRD) | |
| Cnidaria | CnidBase: Cnidarian Evolutionary Genomics Databasehttp://cnidbase.org/index.cgi |
CnidBase | |
| E.coli | Colibri http://genolist.pasteur.fr/Colibri/ |
Intstitut Pasteur | |
| E.coli | CyberCell Database: CCDBhttp://ccdb.wishartlab.com/CCDB/ |
Institute for Biomolecular Design Porject CyberCell | |
| B.subtilis | DBTBShttp://dbtbs.hgc.jp/ |
Genome Center, Inst. Med. Sci., Univ. Tokyo | |
| Forest Tree Breeding | Dendrome Projecthttp://dendrome.ucdavis.edu/ |
UC Davis | |
| Dictyostelium | dictyBasehttp://dictybase.org/ |
Northwestern University | |
| Mouse | Disease Gene Matrixhttp://fantom2.gsc.riken.jp/supplement/disease_genes/ |
Riken Genomic Sciences Center |  |
| E.coli | E.coli database collection - ECDChttp://www.uni-giessen.de/ecoli/ECDC/ecdc.htm |
Justus-Liebig-University （Germany) | |
| E.coli | E.coli Genome Projecthttp://www.genome.wisc.edu |
University of Wisconsin-Madison | |
| E.coli | EcoCyc E. coli Databasehttp://ecocyc.org/ |
SRI's Bioinformatics Research Group |  |
| E.coli | EcoGene 3.0http://www.ecogene.org/ |
University of Miami, School of Medicine | |
| Mouse | EGTC（Database for the Exchangeable Gene Trap Clones） http://egtc.jp/action/main/index |
Institute of Resource Development and Analysis, Kumamoto University |  |
| E.coli | Ehrmann Labhttp://www.cf.ac.uk/biosi/staffinfo/ehrmann/ |
Cardiff University | |
| Medakafish | Ensembl Medakahttp://asia.ensembl.org/Oryzias_latipes/Info/Index?redirect=no |
EBI and WTSI | |
| Zebrafish | Ensembl Zebrafishhttp://asia.ensembl.org/Danio_rerio/Info/Index?redirect=no |
The Wellcom Trust Sanger Institute | |
| E.coli | Escherichia coli O157:H7 Sakaihttp://genome.bio.titech.ac.jp/bacteria/o157/ |
Nara Institute of Science and Technology | |
| E.coli | Escherichia coli Transcription Factor Binding Siteshttp://bayesweb.wadsworth.org/binding_sites/index.html |
the Biometrics Laboratory of Wadsworth Center | |
| E.coli | Evolution of Transcription Factors and the Gene Regulatory Network in Escherichia colihttp://www.mrc-lmb.cam.ac.uk/genomes/madanm/ec_tf/ |
MRC Laboratory of Molecular Biology | |
| Pufferfish | Fugu Genome Projecthttp://www.fugu-sg.org/ |
Fugu Genomics Project | |
| Yeast | Gene Conversion Table http://www-rcf.usc.edu/~forsburg/genetable.html |
PombeNet at The Forsburg Lab | |
| Dictyostelium | GeneDBhttp://www.genedb.org/Homepage |
The Wellcome Trust, Sanger Institute | |
| Actinomycetes | Genome Project of Streptomyces avermitilishttp://avermitilis.ls.kitasato-u.ac.jp/ |
Kitasato University | |
| Rice | Genomes TO Protein structures and functionshttp://structure.rice.dna.affrc.go.jp/gtop/gtop.html |
Laboratory for Gene-Product Informatics at the National Institute of Genetics | |
| E.coli | GenProtEChttp://genprotec.mbl.edu/ |
Marine Biological Laboratory | |
| Beans | Glycine max / soja http://shigen.nig.ac.jp/bean/glycinesoja/top/top.jsp |
Hokkaidou University | |
| Barley, Wheat, Plant.Others | GrainGeneshttp://wheat.pw.usda.gov/GG2/index.shtml |
ARS, USDA |   |
| Rice, Wheat | Gramene: A comparative resource for plantshttp://www.gramene.org/ |
USDA-ARS, Cold Spring Harbor, Conrnell University |  |
| Yeast | Helmholtz Zentrum Munchenhttp://www.helmholtz-muenchen.de/en/ibis/institute/groups/fungal-microbial-genomics/resources/index.html |
MIPS | |
| Mouse | Hereditary hearing impairment in mice - The Jackson Laboratoryhttp://hearingimpairment.jax.org/ |
The Jackson Laboratory | |
| Mouse | International Mouse Strain Resource (IMSR)http://www.findmice.org//index.jsp |
Jackson Laboratory | |
| Human | Keio Mutation Databaseshttp://mutview.dmb.med.keio.ac.jp/MutationView/jsp/index.jsp |
Keio University School of Medicine | |
| Rice | Knowledge-based Oryza Molecular biological Encyclopedia http://cdna01.dna.affrc.go.jp/cDNA/ |
National Institute of Agrobiological Sciences | |
| Beans | Legume Basehttps://www.legumebase.brc.miyazaki-u.ac.jp/index.jsp?language=ja |
Department of Agriculture, Miyazaki University | |
| Rice | MAFF_Rice cDNA Clone Overviewhttp://bank.dna.affrc.go.jp/~qxrice/hiho/ |
MAFF | |
| Plant.Others | Maize Genetics and Genomics Databasehttp://www.maizegdb.org/ |
USDA Agricultural Reserach Service |  |
| E.coli | Maurice Hofnunghttp://www.pasteur.fr/recherche/unites/pmtg/repet/index.html |
The Institut pasteur In France | |
| E.coli | MBGDhttp://mbgd.genome.ad.jp/ |
The University of Tokyo | |
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