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Species | Database | Institution | keyword |
Amphibian | A Xenopus laevis and tropicalis resource http://www.xenbase.org/common/redirectedResource.do |
University of Texas, Austin | |
Arabidopsis | ABRC http://abrc.osu.edu/ |
Ohio State University | |
Amphibian | Abteilung Molekulare Embryologie http://www.dkfz.de/de/mol_embryology/ |
DFKZ(Deutsches Krebsforschungszentrum) | |
Forest Tree Breeding | Arborea http://www.arborea.ulaval.ca/en/ |
Université Laval | |
Rice | Arizona Genomics Institute (AGI) http://www.genome.arizona.edu/ |
Arizona Genomic Institute & Computational Laboratory | |
Arabidopsis, Rice | ASIP Home http://www.plantgdb.org/ASIP/ |
University of Minnesota,Department of Genentics, Devlopement and Cell Biology | |
Rice | ASPGC http://genome.sinica.edu.tw/ |
Academia Sinica Plant Genome Center (Taiwan) | |
Barley | Barley DB http://shigen.nig.ac.jp/barley/ |
National Institute of Genetics | |
Birds | BBSRC ChickEST Database http://www.chick.manchester.ac.uk/ |
The University of Manchester | |
Drosophila | Berkeley Drosophila Genome Project http://www.fruitfly.org/ |
Consortium of the Drosophila Genome Center | |
Rice | BGI Rise Rice Genome Database http://rice.genomics.org.cn/rice/index2.jsp |
Beijing Genomics Institute (China) | |
Rice, Plant.Others | Brachypodium.org http://www.brachypodium.org/ |
Salk Institute for Biological Studies | |
Wheat | Cereal Genomics Home Page http://www.cerealsdb.uk.net/cerealgenomics/Index_Home.html |
University of Bristol | |
Algae (plants), Algae (Microbe) | Chlamy Connection http://www.chlamy.org/ |
Duke University | |
Plant.Others | Cucurbit Genomics Database http://www.icugi.org/cgi-bin/ICuGI/index.cgi |
BARD grants and the International Cucurbit Genomics Initiative (ICuGI) | |
Plant.Others | CUGI http://www.genome.clemson.edu/ |
Clemson University Genomics Institute | |
Microbe.Others | DGC Collaboration Wiki https://wiki.cgb.indiana.edu/display/DGC/Home |
Indiana University | |
Dictyostelium | dictyBase http://dictybase.org/ |
Northwestern University | |
Others | DNA Book http://134.160.84.27/DNA-Book/ |
RIKEN,Japan & JST | |
Mouse | EGTC(Database for the Exchangeable Gene Trap Clones) http://egtc.jp/action/main/index |
Institute of Resource Development and Analysis, Kumamoto University | |
Medakafish | Ensembl Medaka http://asia.ensembl.org/Oryzias_latipes/Info/Index?redirect=no |
EBI and WTSI | |
Pufferfish | Fugu Genome Project http://www.fugu-sg.org/ |
Fugu Genomics Project | |
Birds | Gallus Expression in Situ Hybridization Analysis http://geisha.arizona.edu/geisha/index.jsp |
The University of ARIZONA | |
Tunicata/Chordata | Ghost Database:Ciona intestinalis genomic and cDNA resources http://ghost.zool.kyoto-u.ac.jp/cgi-bin/gb2/gbrowse/kh/ |
Kyoto University | |
Wheat | GrainGenes wEST-SQL Database http://wheat.pw.usda.gov/wEST/ |
US Department of Agriculture. (USDA) | |
Citrus | International Citrus Genome Consortium http://www.citrusgenome.ucr.edu/ |
International Citrus Genome Consortium (ICGC) | |
Barley, Rice, Wheat, Plant.Others | International Triticeae EST Cooperative (ITEC) http://avena.pw.usda.gov/genome/ |
ARS, USDA | |
Tomato | Kazusa Full-length Tomato cDNA Database http://www.pgb.kazusa.or.jp/kaftom/ |
Kazusa DNA Research Institute | |
Rice | Knowledge-based Oryza Molecular biological Encyclopedia (KOME) http://cdna01.dna.affrc.go.jp/cDNA/ |
National Institute of Agrobiological Sciences | |
Medakafish | M-Base(Medaka Genome Database) http://mbase.nig.ac.jp/mbase/medaka_top.html |
University of Tokyo | |
Rice | MAFF_Rice cDNA Clone Overview http://bank.dna.affrc.go.jp/~qxrice/hiho/ |
MAFF | |
Plant.Others | Maize Genetics and Genomics Database http://www.maizegdb.org/ |
USDA Agricultural Reserach Service | |
Medakafish | MEPD: Medaka Expression Pattern Database http://mepd.cos.uni-heidelberg.de/mepd/ |
Medaka Genome Initiative | |
Tomato | MiBASE Micro-Tom Database http://www.kazusa.or.jp/jsol/microtom/ |
Kazusa DNA Research Institute | |
Mouse | NIA Mouse cDNA Project http://lgsun.grc.nia.nih.gov/cDNA/cDNA.html |
NIH | |
Others | NRIB:Comprehensive Aspergillus oryzae Genome Database http://nribf21.nrib.go.jp/CFGD/ |
National Research Institute of Brewing | |
Rice | Oryzabase http://shigen.nig.ac.jp/rice/oryzabase/ |
National Institute of Genetics (Japan) | |
Rice | PLACE(A Database of Plant Cis-acting Regulatory DNA Elements) http://www.dna.affrc.go.jp/PLACE/ |
National Institute of Agrobiological Sciences | |
Rice | Plant Genome Initiative at Rutgers (PGIR) http://pgir.rutgers.edu/ |
Rutgers, The State University f New Jersey | |
Mouse | Projects - Site du Genoscope http://www.genoscope.cns.fr/spip/Projects.html |
Genoscope-EEC Mouse Transcript Consortium | |
Primate | QFbase - Macaca fascicularis cDNA database http://genebank.nibio.go.jp/qfbase/index.html |
National Institute of Biomedical Innovation | |
Rice | RAP-DB http://rapdb.dna.affrc.go.jp/ |
DDBJ (Center for Information Biology and DNA Data Bank of Japan),NIAS (National Institute of Agrobiological Sciences),AIST (National Institute of Advanced Industrial Science and Technology),JBiC (Japan Biological Informatics Consortium),NIG (National Institute of Genetics, Japan) | |
Human | Reactome Pathway Database http://www.reactome.org/ |
Cold Spring Harbor Laboratory and European Bioinformatics Institute. | |
Arabidopsis | Reactome Pathway Database http://www.reactome.org/ |
Cold Spring Harbor Laboratory and European Bioinformatics Institute. | |
Mouse | Reactome Pathway Database http://www.reactome.org/ |
Cold Spring Harbor Laboratory and European Bioinformatics Institute. | |
Drosophila | Reactome Pathway Database http://www.reactome.org/ |
Cold Spring Harbor Laboratory and European Bioinformatics Institute. | |
Arabidopsis | RIKEN Arabidopsis Genome Encyclopedia http://rarge.psc.riken.jp/ |
RIKEN Genomic Sciences Center | |
Silkworm | SilkBase http://silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/index.cgi |
The University of Tokyo | |
Silkworm | Silkworm Genome Database http://papilio.ab.a.u-tokyo.ac.jp/genome/ |
The University of Tokyo | |
Plant.Others, Tomato | Sol Genomics Network http://www.sgn.cornell.edu/ |
Cornell University |