Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,731,420	IS1 (–) +9 bp	coding (290‑298/993 nt)	xylF →	xylose ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	36 (1.240)	34/484	0.1	89.6%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	3731420 =	4 (0.140)					coding (290/993 nt)	xylF	xylose ABC transporter periplasmic binding protein
*	?	NC_000913	= 3584195	NA (NA)	53 (1.830)	49/484	0.0	92.7%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 3731428	4 (0.140)					coding (298/993 nt)	xylF	xylose ABC transporter periplasmic binding protein

ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3583949‑3584195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGTGCAGCAACGTTGGT  <  NC_000913/3731428‑3731179                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCAATAAGTTGGAGTCATTACCTTAC                                                                                                                                                                                                                                                        >  2:131068/1‑251              GTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGAGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAAT                                                                                                                                                                                                                                           >  1:299072/1‑251                   ATGGATGACGGATGGCTGGCCGCTTTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGTAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGGTGGAGTCATTACCTTACAACGTTACTTAATACCTG                                                                                                                                                                                                                                      <  1:217389/251‑1                   ATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCT                                                                                                                                                                                                                                       <  1:286763/250‑1                      GATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACC                                                                                                                                                                                                                                   <  1:24782/251‑1                            GGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTAT                                                                                                                                                                                                                              >  2:40160/1‑250                                GGCTGGCCGCTGTATGAAACCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGG                                                                                                                                                                                                                          <  1:241611/250‑1                                   gggctGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCGCGGCTGGGACGGAAGTCGCTGTCGTTCGCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGGTGGAGTCATTACCTGACAACGTTACTTAATGCCTGACCGTTATACGGAATA                                                                                                                                                                                                                      <  1:308541/246‑1                                    GGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAAT                                                                                                                                                                                                                       <  1:31412/249‑1                                     GCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGAGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCAAGCCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATCCGGAATAAT                                                                                                                                                                                                                    >  1:325999/1‑251                                             ATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAA                                                                                                                                                                                                            <  2:38269/251‑1                                                aatccaggcagaaaGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCTGCATAACCTGAATCTGATGCAGCACCTGGCACGGCTGGGATGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAAGGACAAGAACAT                                                                                                                                                                                                         <  2:139391/237‑1                                                     CGCCTGCAGGAAAAGCTGCACGTAATCAGCATGCGATATACGCAGCGACTTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGCAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGCCAAAGTCATCGGGCATTATCTGAACATAAAAAACTATCAATAAGTTGGAGTCCTTACCTTTCAACGATACTTCATCACTGACCGTTATTCGGAATAATGACAAGAtaaccctc                                                                                                                                                                                                     >  2:164851/1‑242                                                            AGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGT                                                                                                                                                                                             <  2:73106/251‑1                                                            AGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGT                                                                                                                                                                                             <  1:320838/251‑1                                                                       CACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTT                                                                                                                                                                                  >  2:55956/1‑251                                                                       CACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACATGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTT                                                                                                                                                                                  >  1:163623/1‑251                                                                              aCAGCAAGCGCTAAACGCTGCGAATTGAGCGGCTTAACCTGAATCTGAGGCAGCACCTGGCACGTCTGGGACGGAAGTCGTCGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTGCCTTACAACGTTACTTAATCCCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCg                                                                                                                                                                           <  2:302300/250‑2                                                                                  CAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCG                                                                                                                                                                        >  1:217950/1‑250                                                                                          ATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTACCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTG                                                                                                                                                               >  1:334063/1‑251                                                                                             CGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACTCCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTT                                                                                                                                                            <  1:6414/251‑1                                                                                             CGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGAAAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTT                                                                                                                                                            >  1:332974/1‑251                                                                                               CAGCGAATTGAGCGGCATAACCTTAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACATCGTTACTTAATACCTGTCCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTGATCATGTTTTCAATCTGCGACATTTGTGTTTCT                                                                                                                                                          <  2:217950/251‑1                                                                                                   GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCAT                                                                                                                                                      <  1:131068/251‑1                                                                                                     ATTGAGCGGCATAACCTGAATCTGAGGCAGCAACTGGCACGGCAGAGACGGAAGTCGCTGTAGTTCTCAAAATCGGTGGAGCTGCCTGACAAAGTCATCAGGCATTATCTGAACATAAAACACTATCACTAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTAAAAGGACTAATGACAAGAACATCGAAACCCCGATTTATCATGTTATCAATCTGCTACATTTGTGTTACTTCAT                                                                                                                                                      >  1:291429/1‑249                                                                                                         AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCAT                                                                                                                                                <  1:55956/251‑1                                                                                                          GCGGGATAACCGGAATGTTAGTCAGCCCCTGTCACGGCTGGGAAGGAAGGCGATGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATTCGGAATAATGACAAGATCATCGACTCCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTGCTTCATTGCCATT                                                                                                                                               <  2:336211/251‑1                                                                                                              CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTT                                                                                                                                              >  1:251099/1‑248                                                                                                              CATAACCTGAATCTGAGGCAGCACCGGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGTTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTT                                                                                                                                              <  2:251099/248‑1                                                                                                                                cagaACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACAGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTC                                                                                                                         >  2:60262/5‑251                                                                                                                                     CCTGGCACGTCTTGGACGGAAGTCGCTGTCGATCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTTCCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGTCACCCCGGTTTATCATGTTTTCAATCTGCGACAGTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCC                                                                                                                    <  2:100856/251‑1                                                                                                                                      CTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCG                                                                                                                   >  1:63516/1‑251                                                                                                                                        ggcacggtgtGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTTATCGGGCATTATCTGATCATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGAACGTTATACGGAATATTGACAAGAACATCGTCACCTCGGTTTATCATGTTTTCAATCTGCTACATTTGTGTTTCTTCGTTGCCATTTGCAGACTTTACAAATACTTTCGCTCCG                                                                                                                   <  2:198783/239‑1                                                                                                                                                     CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTT                                                                                                    <  1:40160/251‑1                                                                                                                                                         AGTCGCGGTCGTACTCAAAATCGGTGGAGCTGCAGGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTGATACGGAATAATGACAAGAACATCGACCCCCCGGTTTATCATGTTTTCAATCTTCGACATTTGTGTTTCTTCATTGCCATTGGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTTTCTTTTTCA                                                                                                <  2:62607/251‑1                                                                                                                                                             GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAA                                                                                             >  2:213054/1‑250                                                                                                                                                                     TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTC                                                                                    >  1:29088/1‑251                                                                                                                                                                       caaaaaacggggggaCTGCATGACAAAGTCCGCGGGCATTATCTAAACATAAAACACTATCAAGAAGGTGGAGTCATTACCTTACAACTTTACTTAATACCTGACCGTTATACCGAATAATGACAAGAACATCGACACCCCGGTTTAGCATGTTTTCAATCTGCGACATGTGTGTTTCTTTATTGCCATTTGCAGACTGTACAAATTCTTTCTCGCCTAGAGACTCTGCCTTTTTCACAAAGATATCTCGA                                                                                  <  2:315163/236‑1                                                                                                                                                                               GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTTCCTTTTTCCCTAAGATATCTAGATCTTTTTc                                                                          >  1:185765/1‑250                                                                                                                                                                                      CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACACGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACCAAGATATCTCAATCTTTTTGCCAGCGT                                                                   >  2:232017/1‑251                                                                                                                                                                                        GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTC                                                                 <  1:213054/251‑1                                                                                                                                                                                                AAGTCATCGTGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACTTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTGCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGA                                                         <  1:56309/251‑1                                                                                                                                                                                                       CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATC                                                  <  1:17242/251‑1                                                                                                                                                                                                        GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACTTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCA                                                 <  2:63516/251‑1                                                                                                                                                                                                               ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCC                                           >  1:15114/1‑250                                                                                                                                                                                                                      CATAAAACAATATCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATCCCTAT                                   >  2:222519/1‑251                                                                                                                                                                                                                        TAAAACACTAGCAATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACACAGATATCTCGATCTTTTTGCCAGCGTTCACGACGGAGTTCTTCAATCGCCATACCTATTT                                 >  2:48084/1‑251                                                                                                                                                                                                                                 ATCAATAAGTGGGAGTCATTACATTACAACGTTACTTAATACCTGACCGTTATACGTAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATACCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTC                          <  2:299072/249‑1                                                                                                                                                                                                                                     ATAAGTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGC                    >  1:136793/1‑251                                                                                                                                                                                                                                         GTTGGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGAAACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGT                >  1:23338/1‑251                                                                                                                                                                                                                                            GGAGTCATTACCTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGTGC              <  2:15114/250‑1                                                                                                                                                                                                                                              AGTCATTACCTTACAACGTTACGTAATACCTGACCGTGATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTGCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCATCGTTCAAGACGTAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGTGCAGC           <  1:222854/251‑1                                                                                                                                                                                                                                                       CTTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACACGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGTGCAGCAACGTTGGT  >  1:100732/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3583949‑3584195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTACAACGTTACTTAATACCTGACCGTTATACGGAATAATGACAAGAACATCGACACCCCGGTTTATCATGTTTTCAATCTGCGACATTTGTGTTTCTTCATTGCCATTTGCAGACTGTACAAATACTTTCGCGCCGAGAGATTCTGCCTTTTTCACAAAGATATCTCGATCTTTTTGCCAGCGTTCAAGACGGAGATCATCAATCGCCATACCTATTTTGACTTCTTTGGCGTGTGCAGCAACGTTGGT  <  NC_000913/3731428‑3731179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.