Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,731,420	IS1 (–) +9 bp	coding (290‑298/993 nt)	xylF →	xylose ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	36 (1.240)	34/484	0.1	89.6%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	3731420 =	4 (0.140)					coding (290/993 nt)	xylF	xylose ABC transporter periplasmic binding protein
*	?	NC_000913	= 3584195	NA (NA)	53 (1.830)	49/484	0.0	92.7%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 3731428	4 (0.140)					coding (298/993 nt)	xylF	xylose ABC transporter periplasmic binding protein

ATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583658‑3583428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATT  >  NC_000913/3731420‑3731662                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAA                                                                                                                                                                                                                                 <  1:94696/251‑1             TTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGGACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATAAACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATT                                                                                                                                                                                                                     >  1:26756/1‑251                        ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGGTAGCGCTGATGTCCGGCGGTGCTTTTGCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCAACCCAAAAACACCCTCATACACTAAAACAGTCAGATGGCAGCATCACCACGATGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAac                                                                                                                                                                                                          >  2:127647/1‑249                          CGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAACGTATTAGCTT                                                                                                                                                                                                        >  1:145592/1‑251                           GGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGTGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTA                                                                                                                                                                                                       <  1:262830/251‑1                                    AGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGCGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACAAAATCAGGAAGTTGGCAGCATCACCACGTTGTAAAAGAAGACAAACAAGAAAGAATTAAAGAATTAGCTTACGACCGTAT                                                                                                                                                                                              >  2:121166/1‑251                                        GTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATT                                                                                                                                                                                          >  1:34137/1‑251                                             AGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGGCCGGCGGTGCGTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGA                                                                                                                                                                                     <  2:44404/251‑1                                                 AACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCG                                                                                                                                                                                 <  1:17879/251‑1                                                       AGTTGCCATTTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTTCCTTTACGCACCACCCCTTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATC                                                                                                                                                                           <  1:334454/251‑1                                                        GTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCG                                                                                                                                                                          <  1:95879/251‑1                                                            CCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAAAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTT                                                                                                                                                                      >  2:80554/1‑251                                                                    TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTT                                                                                                                                                              >  1:97667/1‑251                                                                    TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTT                                                                                                                                                              >  1:243414/1‑251                                                                    TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATT                                                                                                                                                               <  1:341602/250‑1                                                                       GGCAGTGAGAGAAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTGACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTT                                                                                                                                                           <  2:34137/251‑1                                                                          AGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCG                                                                                                                                                        >  1:206829/1‑251                                                                                  ccGAGATAGCGCTGATGTCCGGCGGGGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAA                                                                                                                                                <  2:243414/249‑1                                                                                                     CGGCGGTGCTTTTGCCGTTACGCCCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAAAAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGGAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATTATTAACGATGCGGATATCGATTTTTATATTTCTTTTGATAACGAAAAAGTCGGTGAAATGCAGG                                                                                                                             >  1:285736/1‑251                                                                                                         GGTGCTTTTGCCGTTACGCACCACCCCGTCCGTACCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAGAAACACCATCACACACTAAATCAGTAAGATAGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGTCCTTCAAGTATAAGCTTACGACCGTATGATTAACGAAGCGGCTATCGATTTTTATATTTCTTTCGATAACGAAAAATACGGTGAACTGCAGGCAA                                                                                                                          >  2:216903/1‑250                                                                                                         GGTGCTTTTGCCGTGACGCACCACCCCGTCAGTAGCTGAACAGGAGTGACAGCTGTTAGAAACAGAAGCCACTGGAGCACCTCAAAAACTCCATCATACACTAAATCAGTAAGTTGTCAGCATCACCACTTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGTTTACGACCGTATGATTAACGATGCTGATATCGATTTTTATATTTCTGTCTATAACGAAAAAGTCGGTGAACTGCAGGCAAA                                                                                                                         <  2:267174/251‑1                                                                                                                                      CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGT                                                                                             <  1:127647/250‑1                                                                                                                                       AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAA                                                                                           <  1:80554/251‑1                                                                                                                                        gtagtgtAACAGGAGGGAACGCTGATAGAAACATAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTATGTTGGCAGCATCACCACGTGGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATTATTAACGATGCTGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGAAATAGCCCTGGTCGATATTGTTCCGCAAGGTAAT                                                                                          <  2:185344/244‑1                                                                                                                                           GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTAC                                                                                       <  1:216903/251‑1                                                                                                                                                   GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCAAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGAAAAAGCCCTGGTTGATATTGTTCCGCAAGGTAATTACTTCCTGAT                                                                               >  1:198838/1‑251                                                                                                                                                       GGACAGCTGATAGAAACAGAAGCCGCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAGGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATATCGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATGGTTTGGCAAGGTAATTTCTTCCTGATGGGC                                                                           <  1:111605/251‑1                                                                                                                                                         catggtgatagcaataaAAGCCACTGGAGCACCTCAAAAACAACATCAAACACTAAATAAGTAAGTTGGCAGCATCACCACGGTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCGTACGACCGTATGATTAACGATGCTGATATCGAGTTTTATATTTCGTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATTGGCGG                                                                         <  2:65513/234‑1                                                                                                                                                               tATAGAAACAGTAGCCACAGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTTTAAAAGAAGCCAAACAAGAAGGCATTAAAGTTTTAGCTTACGACCGTATGATTAACGATGCGTATATCGAGTTTTATATTTCTTTCGATATCGAAAAAGTCGGTGAACAGCAGGCAAAAGCCTTGGTCGATATTGTACCGCAAGGTAATTACTTCCTGATGGGCGGCTCG                                                                     <  2:106570/248‑1                                                                                                                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATCTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCC                                                                                                    >  2:84813/1‑210                                                                                                                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATCTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCC                                                                                                    <  1:84813/210‑1                                                                                                                                                                                           CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCC                                         <  1:121166/249‑1                                                                                                                                                                                             AAAACACCATCCTACACTAAATCAGTAAGTTGGCAGAGTCACCACGTTGTAAATAAAGCCAAAAAAGAATGCATTAAAGTATGATCTTACGACCGTATTATTAACGATGCTGATTTCGATTTTTATGTGTCTTTCGATAACGACAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCACGGTAATTACTTCCTGATGGTCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCtcgt                                     <  2:9797/251‑5                                                                                                                                                                                                             CTAAATCAGTAAGTTGGCAGCATCACCACGTTGTAAAAGAAGACATACACGAAGGCATTAAAGTATTAGCTTACGACCGTATGCTTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTATTCCGCAAGGTAATTAATTCCTGATGGGCGGCTCGCCGGTAGTTACCAACGCCAAGCTGTTCCGagcgggaaacatggaag                       >  2:140026/1‑232                                                                                                                                                                                                                      aAAGTTGGCATCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTAGTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCT            <  1:236715/250‑1                                                                                                                                                                                                                                GCATCACCACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATT  >  1:324884/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583658‑3583428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATT  >  NC_000913/3731420‑3731662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.