Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,466,2760TC22.2% 87.3 / 11.2 54pseudogene (885/2518 nt)ydbAputative outer membrane protein, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base T (20/22);  new base C (9/3);  total (29/25)
Fisher's exact test for biased strand distribution p-value = 1.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCA  >  NC_000913/1466031‑1466523
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                        
aaCGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAcc                                                                                                                                                                                                                                                      >  1:108631/1‑249 (MQ=255)
 gcGGTTAGCTTGTTATTACGGGTGATAATGTCAAAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCTGCGG‑TCGCGGTATTGATAGCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGAGCCGGAGTCCATGGGTATCCAGATCTACGGTTACAAg                                                                                                                                                                                                                                                    <  2:250549/250‑1 (MQ=18)
            gTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGCAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCa                                                                                                                                                                                                                                          <  2:108631/250‑1 (MQ=14)
                  aCGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCTCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACg                                                                                                                                                                                                                                    <  1:214256/250‑1 (MQ=255)
                   cGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGATC‑GGGAAATGGTATCGTCGGGGACAGGGGGAGGGCGGGGAGCGAGCGCACTCA‑GAACAGCACAGATCCGGAGTCCATTGGAATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGa                                                                                                                                                                                                                                   >  2:119526/1‑250 (MQ=12)
                    gggTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAg                                                                                                                                                                                                                                 <  1:57317/251‑1 (MQ=255)
                     ggagATAATGCCACAGTAAACAACAATGGAAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAGCAACGGTAATAACGGGAAAGAGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCAAGGTATTGATATAACCGGTGCCAGCGCGAAGGAGGATAACAAGGGCAC‑CATGACCGTCCCCGATCCGGATTCCACGGGAATACAGATCGAAGGTGACAAGGACATCGTCAATAAcagagg                                                                                                                                                                                                                                >  1:416005/4‑246 (MQ=18)
                     ggTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAgg                                                                                                                                                                                                                                >  1:416028/1‑251 (MQ=255)
                                cacaGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCAG‑TCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCActa                                                                                                                                                                                                                     <  2:222786/251‑3 (MQ=11)
                                  caGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATc                                                                                                                                                                                                                   >  2:380724/1‑251 (MQ=11)
                                   aGTAAACAACAATGGCAAAACCACCGGTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCa                                                                                                                                                                                                                  <  2:235946/251‑1 (MQ=255)
                                          aacaaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGCAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACgg                                                                                                                                                                                                           >  1:274839/1‑251 (MQ=255)
                                              aTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggc                                                                                                                                                                                                       <  2:260654/251‑1 (MQ=255)
                                                   aaaaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGCTCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGAAGGCAACAATCCCATCGTCAATAACGAAGCCGTGAGCACCATCCCCAACGCTggcaccgg                                                                                                                                                                                                  >  1:165311/1‑251 (MQ=17)
                                                     aaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCGTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggc                                                                                                                                                                                                 >  1:325164/1‑250 (MQ=255)
                                                              tGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAtt                                                                                                                                                                                        <  1:88255/250‑1 (MQ=255)
                                                              tGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAtt                                                                                                                                                                                        <  2:29325/250‑1 (MQ=255)
                                                                         aTTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCCG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAAGCCATCGTCCATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGCTGAc                                                                                                                                                                            >  1:411578/1‑251 (MQ=255)
                                                                                         aaTCAACGGTAATAACGGGAAAGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGGGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGGTGACGCCAC‑GGCAaacaac                                                                                                                                                            >  1:115009/1‑250 (MQ=255)
                                                                                             aaCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGCGACAGCGCGCCGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCCTGGGGATCCGGGTCGACGGCGACAAGGCCGTCGTTAATAACGAAGGCAAAAGCGCCATCACCCACGGTGGCACCGGCACGCCGATTAATGGTGATGAcaactcggcacacgaccgcgg                                                                                                                                                        >  2:361318/1‑231 (MQ=11)
                                                                                                      aaCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAAAAAGGGCAC‑AATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCaacacaac                                                                                                                                              >  1:419990/1‑245 (MQ=255)
                                                                                                       aCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAaccac                                                                                                                                              >  2:296624/1‑250 (MQ=255)
                                                                                                       aCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAaccac                                                                                                                                              <  1:296624/250‑1 (MQ=255)
                                                                                                             aggtaaTTCAGGACTGCGATCTGGATGTCGACGTCGGCGG‑GCACGGTATGGATATCGCCGTGGACAGCGCGACGGTGGATATGAAGGGCAC‑GATGACCGGCTCTGATCCGGAGTCCATGGGTATCCAGATAGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTGATGCCGTCAC‑GGCAAACAACAACGGCAAAGCCACCGTTGAc                                                                                                                                       <  1:9837/246‑1 (MQ=2)
                                                                                                             aaGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACAAGGCCATCGTCGATAACCAAACCTAGAGCCCCCACACCAACGGTGGCACCGGCACCCAGGTTATTGGTGATGACGC‑ACAGGCAAACAACAACGGCAAAACCACCGTTGAc                                                                                                                                       >  1:180084/1‑251 (MQ=14)
                                                                                                              aGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATAGCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACg                                                                                                                                      <  2:274839/251‑1 (MQ=255)
                                                                                                                  aTTCAGGACGGCGCTCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATCACCGTCACCGATCCGGAATCCATGGGTATGCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGAAAAACCACCGTTGACGGCa                                                                                                                                   >  1:351863/1‑250 (MQ=255)
                                                                                                                        gagggcgcgcgggaggTCAGCGGCGGTGG‑TAGCGGGATTGATGTCACCGGTGACAGGGAGGCGGTGTATAACAAGGGCAC‑CATGACCGTCCCGGGTCCGGAGGCCGTGGGGATCCAGAGCGACGGTGACAAGGCCATCGTCAATAACGGAGGCGAGAGCACCATCACCAACGGTGGCACCGGACCCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTc                                                                                                                            <  2:74003/236‑1 (MQ=18)
                                                                                                                        gACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATAACCGGTGAAAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATAGGTATCCAGATCGACGGCGACAAGGCCCTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGCGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTc                                                                                                                            >  1:26201/1‑251 (MQ=14)
                                                                                                                                  tGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGAGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGGCGGTGACACCGCCGTCGGCAATAACGAAGGAGAGAGCACCATCACCAAAGGTGGCACCGGCCCCCAGAATAATGGGGATGACGCCAC‑GGCAAACCACCACGGCACAACCCCCGCTGACGGCAAGGCTTACACCGGGACg                                                                                                                  >  2:410954/1‑251 (MQ=17)
                                                                                                                                   ggaaggcagtggcggcgg‑TCACGGTAGTGATATCACCGGTGACAGCGAGACGGTGGATAACAAGGGCAC‑CATGATCGTCCCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGAGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAc                                                                                                                   <  2:300005/239‑1 (MQ=18)
                                                                                                                                   ggATGTCATCGGCGGCGG‑TTGCGGGATTGATATCACCGGGGACAGTGCGACGGTGGTTAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCAAGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAAGAACGAAGGCGAGAGCATCATCACCAACGGTGGCCCCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAGCAACATCGGCAAAACCTCCGGTGACTGCAAGGATTCCACCgg                                                                                                                      <  2:411578/246‑1 (MQ=17)
                                                                                                                                   ggATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCTCCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAc                                                                                                                   <  1:384379/249‑1 (MQ=255)
                                                                                                                                       gTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCAAGGTCGACGGCGACAAGGCCATCGTCAATAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAAt                                                                                                             >  1:198926/1‑251 (MQ=255)
                                                                                                                                             ggcggcgg‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATACCAAGGGCAC‑CATGACCGTCACCGCTCCGGAGTCCATGGGTATCCAGGTCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGGGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACgg                                                                                                       >  1:180420/1‑251 (MQ=255)
                                                                                                                                                             aTTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGTCGACGGCGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAAtagaaggtaaaaacgggaa                                                                                           >  2:179776/1‑230 (MQ=17)
                                                                                                                                                                                   agaaggTGGATAATAAGGAGAC‑CATGACCATCACCGGCCCGAAGTATAAGGGTAACCACATCGACGGTGACAAGGCCATCGGCAATAACGAAGGCGAGAACACCATCAAAAACCGTGACGCCGGCATCCAGATTAATGGTGATAACGCCAC‑GGCAAACAACAATGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAAGCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGAt                                                                  <  1:91093/247‑1 (MQ=18)
                                                                                                                                                                                    gACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGCTGGCAATAACGGGAAGGTGATTCAGGAGGGCggtcgggcgg                                                                 >  2:136234/1‑242 (MQ=14)
                                                                                                                                                                                              aaCAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGCTGTCAgcggcgg                                                       >  1:264250/1‑251 (MQ=255)
                                                                                                                                                                                               aCAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATCAATGGCGAAGACGCCAC‑GGCAAGCAACAACGGCAAGACCACCGTGGACGGCGAGGCTTCCACCAGCACGGAAATCAACGGCAATAACGGGAAAGTGATTCAGGACGGACATCAGGAAGTCAgcagcagg                                                      >  2:322854/1‑245 (MQ=18)
                                                                                                                                                                                               aCAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCAAGCGTCAATAACGAAGGCGAGAGCGTGATCAGAAACGAGGGCAGCGGCATCCAGATTAAGGGTGATGATGCCAC‑AGTAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAgcggcggc                                                      <  1:119526/251‑1 (MQ=18)
                                                                                                                                                                                                     gCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGCGCCAAGGCCATCGTCAATAACGAAGGCGCGCGCACCATCAACAACGGGGGCAACGGCACCCCGCTTAATGGTGATGACGCCAC‑GGCACACAACAACGGCAAAACCACCGATGACGGCAAGGATTACAACGGTACGGAACTCAACGGGAATAACGGAAACGTTATCCAGGACGGCGATCTGGATGTCAgcggcggccgcca                                                 >  1:190993/1‑245 (MQ=18)
                                                                                                                                                                                                                      cGATCCTGAGTCCATGGGTTTCCAGATCGACGGTGCTAAGGCTAGCGTCAATAACGAAGGCGAGAGAACCATCACCAACGGTGGAACCGGCACCAAGATAAATGTTGATGACGGAAC‑GGAATACAGCAGCGGCAAAATCACCGTTGACGGCAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCTCGGTATTGATATCACCg                                <  1:280305/251‑1 (MQ=18)
                                                                                                                                                                                                                       gATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCgg                               >  1:436023/1‑251 (MQ=255)
                                                                                                                                                                                                                          ccGGAGGCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAAGAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGa                            <  2:264250/251‑1 (MQ=255)
                                                                                                                                                                                                                            ggAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGAc                           >  1:434530/1‑250 (MQ=255)
                                                                                                                                                                                                                            ggAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACACAGATAAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACGGGTACGAAAATCGACGGTAATAACGGCATAGATATTCGGGACGGCGAACTGGCTGTCAGCGGCGGCGGGCACGGtcatgagaacatcggtgac                           >  1:35538/1‑232 (MQ=18)
                                                                                                                                                                                                                            ggAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCAGCGTCAATAACGAAGGCGAGAGCACCAACACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACa                          <  1:146308/251‑1 (MQ=255)
                                                                                                                                                                                                                             gAGTCCATGGGTAGCCAGATCGTCGGTGACAAGGCCAGCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACTCCAC‑GGCAAACAACAACGTCAAAACCACCGTTGACGGCACGGAGTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCTCGGTATTGATATCActttcccgtt                         <  2:419990/251‑10 (MQ=18)
                                                                                                                                                                                                                                    tGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTCCGGAAATCAATGGAAATAACGGGAAGGTGATTCAGGCCAGCGATCGGGTTGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGCGACAGCGCAACg                  >  1:329534/1‑251 (MQ=17)
                                                                                                                                                                                                                                    aggctatacAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCTATATCTCCAACGGTGGCACCGGCATCCAGATTAATGGTGATGATGCCAC‑GGTAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACg                  <  1:294547/243‑1 (MQ=18)
                                                                                                                                                                                                                                                   aCGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGc                                                                           <  2:107710/179‑1 (MQ=255)
                                                                                                                                                                                                                                                   aCGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGc                                                                           >  1:107710/1‑179 (MQ=255)
                                                                                                                                                                                                                                                    cGGTGACAACGCCTTCGTCAATAACGAAGGTGTTAGCACCATCACCAACGGTGGCACCGGCACTAAGATTAAGGGTTATGACGCCAC‑GTCAAACAACTACTGCAATTTCACCGTTCACGGCCAGGCGACCTCCGGTCCCGTTCCCTACGCGACGCTCTGCAGATTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCa  <  2:351863/251‑1 (MQ=2)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                        
AACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGG‑TCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAC‑GGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCA  >  NC_000913/1466031‑1466523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑