| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_012971 | 2,969,387 | Δ670 bp | coding (226‑895/1494 nt) | gspE ← | type II secretion system ATPase GspE |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012971 | 2969387 | 2970056 | 670 | 59 [0] | [0] 59 | gspE | type II secretion system ATPase GspE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012971 | = 2969386 | 0 (0.000) | 59 (0.620) | 39/586 | 1.1 | 100% | coding (896/1494 nt) | gspE | type II secretion system ATPase GspE |
| ? | NC_012971 | 2970057 = | 0 (0.000) | coding (225/1494 nt) | gspE | type II secretion system ATPase GspE | |||||
TTGATACGCGAGACCAGCAGCGAGGCCAGCTTGCGACCGGGGCGCAACATTTCATGTAATGTGCCGTCAACACGAAAACGGATCACCAGACTCTTTTCAAACGTCTCGATGTGGATATCCGAAGCGCCTTCTTTAATCGCCTCTGCCAGCATGGCGTTGATCAGTTTGATGATCGGCGCATCGTCGTCACTTTCCAGCAGATCTTCCGTTTCCGGCAGTTCTTCTGCGAGGGTAAAAAAGTCCTCGGCAGAACCGAGATCTTCCATCAGTTGGCGAGCCTCGGAAGAGTCCCGCTGCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGCCTGGTTTTGCGCTGGCAGTACC > NC_012971/2969761‑2970353 | ggcctggcggcagtcggggcacagcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCa > 2:690553‑M2/297‑299 (MQ=255) tggcggcagtcggggnacagcgtacggaccagtcnctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcattacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtnttaacctgtgCCAGAc < 1:682975‑M2/6‑1 (MQ=255) tggcggcagtcggggnacagcgtacggaccagtcnctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtnttaacctgtgCCAGAc < 1:682666‑M2/6‑1 (MQ=255) tggcggcagtcggggcacagcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGAc < 1:781757‑M2/6‑1 (MQ=255) gcagtcggggcacagcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTc < 1:455352‑M2/13‑1 (MQ=255) ggggcacagcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGc < 1:757851‑M2/19‑1 (MQ=255) gcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTtcaca > 1:472738‑M2/274‑298 (MQ=255) gcgtacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCaaa > 2:691815‑M2/274‑300 (MQ=255) tacggaccagtcgctgcgccatcacgcccgtcagactggaagagagcagtaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcgggatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAAtt < 2:196896‑M2/29‑1 (MQ=255) tcgctgcgccatcacgcccgtcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaancgcgcgcaggcaacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTtcgtc > 2:630598‑M2/261‑299 (MQ=255) tcagactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAggg < 1:761038‑M2/60‑1 (MQ=255) gactggaagagagcaggaaaggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcaatacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGgcgc > 2:754834‑M2/238‑300 (MQ=255) ggctctacccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccaagggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCt > 1:36959‑M2/218‑300 (MQ=255) cccccatatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCaa > 1:186335‑M2/211‑300 (MQ=255) cccatatcctgcaaacncgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCGGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTANAGGGCGCGTTCAGCCCCCNCTGCAGCTCCTGCaaaa > 1:687394‑M2/209‑300 (MQ=255) atatcctgcaaacgcgtaatcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAAc < 1:462265‑M2/93‑1 (MQ=255) tcgcccccaccgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAAc < 1:188012‑M2/114‑1 (MQ=255) accgccgtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATggag < 1:642485‑M2/120‑1 (MQ=255) gtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCNGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCa > 1:151998‑M2/173‑300 (MQ=255) gtgttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCa > 1:293962‑M2/173‑300 (MQ=255) ttggtatgcagcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGNTTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGc > 2:623889‑M2/170‑299 (MQ=255) gcgtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCa > 1:137009‑M2/160‑300 (MQ=255) gcgtggaaaggaccaagtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgaggatttcaccgaccatcaatacatccgggtcctgacgcaaaatcgcgcgcaggccaagggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATCCGGCTTCGTCGCTTTGCCGCAGCGTAAAGGGCGCGTTCCGCCCACGCTGCAGCTCCTGCAAAACAGAGAGCGAAAACAGATGAACACGGAGGAGCTCCAGTGCCGCTCCGCa > 2:384005‑M2/160‑300 (MQ=255) gtggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCAc < 2:293962‑M2/142‑1 (MQ=255) gtggaaaggaccaggtgtcaggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCAc < 1:612160‑M2/142‑1 (MQ=255) tggaaaggaccaggtgtccggtaattgaagcctgtacggcggtttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCAc < 2:151998‑M2/142‑1 (MQ=255) ggaaaggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCAt < 1:289597‑M2/145‑1 (MQ=255) ggaccaggtgtccggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGccac < 1:775937‑M2/150‑1 (MQ=255) ggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAAcc < 1:101872‑M2/161‑1 (MQ=255) ggtaagtgaagcctggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtccngacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAAcc < 1:157925‑M2/161‑1 (MQ=255) tggacggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtactgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCAGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGt < 1:114704‑M2/176‑1 (MQ=255) ggcgatttctgcggtttcggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGc < 2:556639‑M2/181‑1 (MQ=255) ggtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGc < 1:522954‑M2/198‑1 (MQ=255) gtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAg < 2:806190‑M2/200‑1 (MQ=255) gtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAg < 1:718467‑M2/200‑1 (MQ=255) gtatcgcggatttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTGAGCAg < 1:718457‑M2/200‑1 (MQ=255) tttcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCtg < 1:454436‑M2/210‑1 (MQ=255) tcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTc > 1:723762‑M2/89‑295 (MQ=255) tcaccgaccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGAACGGTGTTAGAAGTGGTTTc > 2:237296‑M2/89‑295 (MQ=255) accatcactacatccggttcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgcctacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAg < 1:272241‑M2/218‑1 (MQ=255) accatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAg < 1:272001‑M2/218‑1 (MQ=255) accatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAg < 2:675177‑M2/218‑1 (MQ=255) ccatcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACa > 1:540603‑M2/82‑298 (MQ=255) atcactacatccgggtcctgacgcaaaatcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCa < 2:691313‑M2/221‑1 (MQ=255) atcactacatccggggcctgacgcaaaatcgcgcgcaggccacgggcaaaggtcatgccgacacgggtgttaaccggtgCCAGACCGCATTCAGCCGCTGTTCAAATTTGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCATCGACGCTTCGCACCATGCCACCATGCTAAACCTACGGCTGAAACTGTAGGACAAACGCACGGTGTCAGCActggttccctatcctcccc < 2:280514‑M2/218‑10 (MQ=255) tcgcgcgcaggccacgggcgaaggtcatgcctacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAgg < 2:313199‑M2/249‑1 (MQ=255) tcgcgcgcaggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCTGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAACTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACTGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAgg < 2:313476‑M2/249‑1 (MQ=255) gcgcgcaggccacggtcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTTAGGaa < 2:387020‑M2/251‑1 (MQ=255) ggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCTCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGa > 1:402439‑M2/43‑300 (MQ=255) ggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGa > 2:542509‑M2/43‑300 (MQ=255) ggccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGa > 1:382282‑M2/43‑300 (MQ=255) ccacgggcgaaggtcatgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGaa > 2:545807‑M2/41‑299 (MQ=255) tgccgacgcgggtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGcc < 1:530596‑M2/276‑1 (MQ=255) gtgttaacctgtgCCANACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGANTGCGCGAACTTCCGGCGGNAAGGCCTGGTTTTgcgc > 1:673343‑M2/14‑300 (MQ=255) gtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCCCCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGCCTGGTTTTgcgc > 2:441171‑M2/14‑300 (MQ=255) gtgttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGCCTGGTTTTgcgc > 1:13248‑M2/14‑300 (MQ=255) gttaacctgtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCAACAGGCTAAACCGACGGCTGAAACTGTAGGGCAGAAGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGACTGGTTTTGCGCt > 2:169458‑M2/12‑299 (MQ=255) gtgCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGCCTGGTTTTGCGCTGGCAGTAcc > 1:741173‑M2/4‑300 (MQ=255) gtgCCAAACCGCATCCAGCCGCTGTTCAAATTCGGCTCCGTCGATTTGCCGCAGCGTAAAGGACACGCTCAGCACCCGCTGCAGCTCCTGCAAGACAAAGAGCGACAACGGATGAACATGAAGAATCTACAGCGACGCTCAGCACCATACCACCAGGCTAAACCGACGACTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGTACCATTACCGCGTTCTCCCGGCATTGAGGAATACGCGAACTTcc > 2:335069‑M2/4‑267 (MQ=255) | TTGATACGCGAGACCAGCAGCGAGGCCAGCTTGCGACCGGGGCGCAACATTTCATGTAATGTGCCGTCAACACGAAAACGGATCACCAGACTCTTTTCAAACGTCTCGATGTGGATATCCGAAGCGCCTTCTTTAATCGCCTCTGCCAGCATGGCGTTGATCAGTTTGATGATCGGCGCATCGTCGTCACTTTCCAGCAGATCTTCCGTTTCCGGCAGTTCTTCTGCGAGGGTAAAAAAGTCCTCGGCAGAACCGAGATCTTCCATCAGTTGGCGAGCCTCGGAAGAGTCCCGCTGCCAGACCGCATTCAGCCGCTGTTCAAATTCGGCTTCGTCGATTTGCCGCAGCGTAAAGGGCGCGTTCAGCCCCCGCTGCAGCTCCTGCAAAACAGAGAGCGACAACGGATGAACATGGAGGATCTCCAGCGACGCTTCGCACCATGCCACCAGGCTAAACCGACGGCTGAAACTGTAGGGCAGACGCACGGTGTTAGCAGTGGTTTCCTGTGCTACAGGCACCATTAACGCGTTCTCCCGGCATTGAGGAATGCGCGAACTTCCGGCGGTAAGGCCTGGTTTTGCGCTGGCAGTACC > NC_012971/2969761‑2970353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |