| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_012971 | 2,969,387 | Δ670 bp | coding (226‑895/1494 nt) | gspE ← | type II secretion system ATPase GspE |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012971 | 2969387 | 2970056 | 670 | 59 [0] | [0] 59 | gspE | type II secretion system ATPase GspE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012971 | = 2969386 | 0 (0.000) | 59 (0.620) | 39/586 | 1.1 | 100% | coding (896/1494 nt) | gspE | type II secretion system ATPase GspE |
| ? | NC_012971 | 2970057 = | 0 (0.000) | coding (225/1494 nt) | gspE | type II secretion system ATPase GspE | |||||
GGCCTGGCGGCAGTCGGGGCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGTCTGACCGATCCCTTCAATCATGTATTCGATGGGATCTTCAACCGTGAGAATGTTGCGCGAATGGTTGTTCAGCTCCTGCAATCCGGCGTACAGCGTGGTGCTTTTGCCGGAACCTGTCGGCCCCGTCACCAGAAAGATGCCGTGCGGTTTGTGTAACAGCTGGCGCAACTGCGCAGTCAGTTCGTGACTTAAACCCAGACGCTCCAGCGTCAGGCGGGCCTGGTTTTTGTCCAGCAGTCGCAGCACCACGCGCTCGCCCCAGGCGGAAGGCATGGTGGAGACGCGCACGTCGATCG > NC_012971/2969091‑2969683 | ggCCTGGCGGCAGTCGGGGCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGcca > 2:690553‑M1/1‑296 (MQ=255) tGGCGGCAGTCGGGGNACAGCGTACGGACCAGTCNCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCATTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTNTTAACCTGTGccagac < 1:682975‑M1/298‑7 (MQ=255) tGGCGGCAGTCGGGGNACAGCGTACGGACCAGTCNCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTNTTAACCTGTGccagac < 1:682666‑M1/298‑7 (MQ=255) tGGCGGCAGTCGGGGCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagac < 1:781757‑M1/298‑7 (MQ=255) gcAGTCGGGGCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattc < 1:455352‑M1/300‑14 (MQ=255) ggggCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgc < 1:757851‑M1/300‑20 (MQ=255) gCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaca > 1:472738‑M1/1‑273 (MQ=255) gCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaa > 2:691815‑M1/1‑273 (MQ=255) tACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGTAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGGATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaatt < 2:196896‑M1/299‑30 (MQ=255) tCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAANCGCGCGCAGGCAACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtc > 2:630598‑M1/1‑260 (MQ=255) tCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaaggg < 1:761038‑M1/300‑61 (MQ=255) gACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCAATACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgc > 2:754834‑M1/1‑237 (MQ=255) ggCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCAAGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagct > 1:36959‑M1/1‑217 (MQ=255) cccccATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaa > 1:186335‑M1/1‑210 (MQ=255) cccATATCCTGCAAACNCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcggccgctgttcaaattcggcttcgtcgatttgccgcagcgtanagggcgcgttcagcccccnctgcagctcctgcaaaa > 1:687394‑M1/1‑208 (MQ=255) atatCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaac < 1:462265‑M1/298‑94 (MQ=255) tCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaac < 1:188012‑M1/300‑115 (MQ=255) aCCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggag < 1:642485‑M1/298‑121 (MQ=255) gtgtTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcngcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctcca > 1:151998‑M1/1‑172 (MQ=255) gtgtTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctcca > 1:293962‑M1/1‑172 (MQ=255) ttGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgntttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagc > 2:623889‑M1/1‑169 (MQ=255) gCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgca > 1:137009‑M1/1‑159 (MQ=255) gCGTGGAAAGGACCAAGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGAGGATTTCACCGACCATCAATACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCAAGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaatccggcttcgtcgctttgccgcagcgtaaagggcgcgttccgcccacgctgcagctcctgcaaaacagagagcgaaaacagatgaacacggaggagctccagtgccgctccgca > 2:384005‑M1/1‑159 (MQ=255) gTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcac < 2:293962‑M1/299‑143 (MQ=255) gTGGAAAGGACCAGGTGTCAGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcac < 1:612160‑M1/299‑143 (MQ=255) tGGAAAGGACCAGGTGTCCGGTAATTGAAGCCTGTACGGCGGTTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcac < 2:151998‑M1/298‑143 (MQ=255) ggAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccat < 1:289597‑M1/300‑146 (MQ=255) ggACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccac < 1:775937‑M1/300‑151 (MQ=255) ggTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaacc < 1:101872‑M1/298‑162 (MQ=255) ggTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCNGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaacc < 1:157925‑M1/298‑162 (MQ=255) tGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTACTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagcagctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgt < 1:114704‑M1/300‑177 (MQ=255) ggCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggc < 2:556639‑M1/300‑182 (MQ=255) ggTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagc < 1:522954‑M1/299‑199 (MQ=255) gTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcag < 2:806190‑M1/300‑201 (MQ=255) gTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcag < 1:718467‑M1/300‑201 (MQ=255) gTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgtgagcag < 1:718457‑M1/300‑201 (MQ=255) tttCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctg < 1:454436‑M1/300‑211 (MQ=255) tCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttc > 1:723762‑M1/1‑88 (MQ=255) tCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgaacggtgttagaagtggtttc > 2:237296‑M1/1‑88 (MQ=255) aCCATCACTACATCCGGTTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCTACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacag < 1:272241‑M1/300‑219 (MQ=255) aCCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacag < 1:272001‑M1/300‑219 (MQ=255) aCCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacag < 2:675177‑M1/300‑219 (MQ=255) ccATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctaca > 1:540603‑M1/1‑81 (MQ=255) aTCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggca < 2:691313‑M1/300‑222 (MQ=255) aTCACTACATCCGGGGCCTGACGCAAAATCGCGCGCAGGCCACGGGCAAAGGTCATGCCGACACGGGTGTTAACCGGTGccagaccgcattcagccgctgttcaaatttggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccatcgacgcttcgcaccatgccaccatgctaaacctacggctgaaactgtaggacaaacgcacggtgtcagcactggttccctatcctcccc < 2:280514‑M1/297‑219 (MQ=255) tCGCGCGCAGGCCACGGGCGAAGGTCATGCCTACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgagg < 2:313199‑M1/300‑250 (MQ=255) tCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattctgcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcaactcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgactgctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgagg < 2:313476‑M1/300‑250 (MQ=255) gcgcgcAGGCCACGGTCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcatttaggaa < 2:387020‑M1/300‑252 (MQ=255) ggCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagcctctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcga > 1:402439‑M1/1‑42 (MQ=255) ggCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcga > 2:542509‑M1/1‑42 (MQ=255) ggCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcga > 1:382282‑M1/1‑42 (MQ=255) ccACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcgaa > 2:545807‑M1/1‑40 (MQ=255) tGCCGACGCGGGTGTTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcgaacttccggcggtaaggcc < 1:530596‑M1/300‑277 (MQ=255) gtgtTAACCTGTGccanaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggantgcgcgaacttccggcggnaaggcctggttttgcgc > 1:673343‑M1/1‑13 (MQ=255) gtgtTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggccccattaacgcgttctcccggcattgaggaatgcgcgaacttccggcggtaaggcctggttttgcgc > 2:441171‑M1/1‑13 (MQ=255) gtgtTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcgaacttccggcggtaaggcctggttttgcgc > 1:13248‑M1/1‑13 (MQ=255) gtTAACCTGTGccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaacaggctaaaccgacggctgaaactgtagggcagaagcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcgaacttccggcggtaaggactggttttgcgct > 2:169458‑M1/1‑11 (MQ=255) gtgccagaccgcattcagccgctgttcaaattcggcttcgtcgatttgccgcagcgtaaagggcgcgttcagcccccgctgcagctcctgcaaaacagagagcgacaacggatgaacatggaggatctccagcgacgcttcgcaccatgccaccaggctaaaccgacggctgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggcaccattaacgcgttctcccggcattgaggaatgcgcgaacttccggcggtaaggcctggttttgcgctggcagtacc > 1:741173‑M1/1‑3 (MQ=255) gtgccaaaccgcatccagccgctgttcaaattcggctccgtcgatttgccgcagcgtaaaggacacgctcagcacccgctgcagctcctgcaagacaaagagcgacaacggatgaacatgaagaatctacagcgacgctcagcaccataccaccaggctaaaccgacgactgaaactgtagggcagacgcacggtgttagcagtggtttcctgtgctacaggtaccattaccgcgttctcccggcattgaggaatacgcgaacttcc > 2:335069‑M1/1‑3 (MQ=255) | GGCCTGGCGGCAGTCGGGGCACAGCGTACGGACCAGTCGCTGCGCCATCACGCCCGTCAGACTGGAAGAGAGCAGGAAAGGCTCTACCCCCATATCCTGCAAACGCGTAATCGCCCCCACCGCCGTGTTGGTATGCAGCGTGGAAAGGACCAGGTGTCCGGTAAGTGAAGCCTGGACGGCGATTTCTGCGGTTTCGGTATCGCGGATTTCACCGACCATCACTACATCCGGGTCCTGACGCAAAATCGCGCGCAGGCCACGGGCGAAGGTCATGCCGACGCGGGTGTTAACCTGTGTCTGACCGATCCCTTCAATCATGTATTCGATGGGATCTTCAACCGTGAGAATGTTGCGCGAATGGTTGTTCAGCTCCTGCAATCCGGCGTACAGCGTGGTGCTTTTGCCGGAACCTGTCGGCCCCGTCACCAGAAAGATGCCGTGCGGTTTGTGTAACAGCTGGCGCAACTGCGCAGTCAGTTCGTGACTTAAACCCAGACGCTCCAGCGTCAGGCGGGCCTGGTTTTTGTCCAGCAGTCGCAGCACCACGCGCTCGCCCCAGGCGGAAGGCATGGTGGAGACGCGCACGTCGATCG > NC_012971/2969091‑2969683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |