Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,506,416	Δ45 bp	coding (245‑289/537 nt)	sutR →	DNA‑binding transcriptional dual regulator SutR

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1506416	1506460	45	37 [0]	[0] 37	sutR	DNA‑binding transcriptional dual regulator SutR

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1506415	0 (0.000)	37 (1.040)	34/462	0.2	100%	coding (244/537 nt)	sutR	DNA‑binding transcriptional dual regulator SutR
	?	NC_000913	1506461 =	0 (0.000)					coding (290/537 nt)	sutR	DNA‑binding transcriptional dual regulator SutR

CATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACAGCAGGCGATGGTGATCACTTCGCTGTTTCCTTATGATCCACAACTCTGCTTTGAACACTTCTCGATTCAGATGGCATCTGGTGCAATAAGCGAATCGACGCCCCATGAGAAGGGGGTAATCGAACATGTCGTCGTCATTGATGGACAACTTGATCTGTGCGTTGATGGGGAATGGCAGACCCTTAATTGTGGGGAAGGCGTTCGATTTGCTGCAGACGTCACGCATATCTATCG  >  NC_000913/1506171‑1506650                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                            cATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgct                                                                                                                                                                                                                                       <  1:277101‑M1/251‑7 (MQ=255)  aTGGAAAATCTCGCTCGCTTTTTATCCACCACCCTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctg                                                                                                                                                                                                                                      <  2:195198‑M1/251‑8 (MQ=255)                 cgctTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgat                                                                                                                                                                                                                       <  2:2818‑M1/251‑23 (MQ=255)                                                  cagcagCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACAGTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgac                                                                                                                                                                                      <  1:370270‑M1/251‑56 (MQ=255)                                                     cagcGCGGCTGGAGTCTTTCGCGACAGGCAGAAGCGACGGGCGTTTCTCAAGCAATGTTAGGGCAGCTTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCCTTTTCAACATTTATTTCTCCGCCGCAGTACGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaccacttctcgattcagatggcatctggtgcaataagcgaatcgacgcc                                                                                                                                                                                   >  2:322577‑M1/1‑193 (MQ=255)                                                      atcgcggcTGGAGACTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGCGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGGACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggcgcaataagcgaatcgacgccc                                                                                                                                                                                  >  2:256747‑M1/3‑192 (MQ=255)                                                      agcGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccc                                                                                                                                                                                  >  1:101506‑M1/1‑192 (MQ=255)                                                        cgcgGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACgctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgcccca                                                                                                                                                                                <  1:183753‑M1/251‑62 (MQ=255)                                                         gcgGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccat                                                                                                                                                                               <  2:275363‑M1/251‑63 (MQ=255)                                                                          cgACTGGAAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaatcagcgaatcgacgccccgtgagaagggggtaatcg                                                                                                                                                               >  2:274948‑M1/1‑172 (MQ=255)                                                                                        gACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtc                                                                                                                                                 >  1:136388‑M1/1‑158 (MQ=255)                                                                                           gggCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGAAACACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattg                                                                                                                                             >  1:110790‑M1/1‑155 (MQ=255)                                                                                            ggCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattg                                                                                                                                             >  1:61215‑M1/1‑154 (MQ=255)                                                                                                        gCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttg                                                                                                                                 >  1:237239‑M1/1‑142 (MQ=255)                                                                                                              ttAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAACTTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtg                                                                                                                          >  1:147949‑M1/1‑136 (MQ=255)                                                                                                                             ggtAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgcattgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatg                                                                                                           <  2:259654‑M1/250‑131 (MQ=255)                                                                                                                                   gAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagac                                                                                                     <  1:288125‑M1/251‑137 (MQ=255)                                                                                                                                              gACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCACTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtg                                                                                          >  2:178428‑M1/1‑104 (MQ=255)                                                                                                                                               aCGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtgg                                                                                         <  1:170609‑M1/251‑149 (MQ=255)                                                                                                                                                                              ggTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacg                                                          <  2:61215‑M1/251‑180 (MQ=255)                                                                                                                                                                                  gAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcata                                                      <  1:277963‑M1/251‑184 (MQ=255)                                                                                                                                                                                         ccATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcg                                               >  1:129008‑M1/1‑61 (MQ=255)                                                                                                                                                                                                 aaCATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtg                                       <  2:41260‑M1/251‑199 (MQ=255)                                                                                                                                                                                                 aaCATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcg                                                                                                                                                   <  2:268123‑M1/143‑91 (MQ=255)                                                                                                                                                                                                 aaCATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCAACACCtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtg                                       >  2:54129‑M1/1‑53 (MQ=255)                                                                                                                                                                                                   cATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggg                                     >  1:46795‑M1/1‑51 (MQ=255)                                                                                                                                                                                                          ttCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaa                               >  2:83748‑M1/1‑44 (MQ=255)                                                                                                                                                                                                            ctcCGCCGCAGTCCGCTACGCCTTCAGTTTCTGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaatacgcgaatcgacgccccctgcgaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtgggga                                   >  1:348377‑M1/1‑42 (MQ=255)                                                                                                                                                                                                            ctcCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaacc                            >  1:56880‑M1/1‑42 (MQ=255)                                                                                                                                                                                                            ctcCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtgggga                                   <  2:348377‑M1/244‑203 (MQ=255)                                                                                                                                                                                                             tcCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaaccg                           >  1:82142‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                   gcAGTCCGCTACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaaccgtacatt                     <  2:129008‑M1/251‑217 (MQ=255)                                                                                                                                                                                                                        ccGCTACGCCTTCAGTTTATGATCCGCAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaatggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaatcgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtgggtagcaaaccgtccattttca                 <  2:179430‑M1/250‑221 (MQ=255)                                                                                                                                                                                                                            tACGCCTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagccgtcacgcatatctatcgtaatggtggggagcaaaccgtacattttcattccc            >  2:23164‑M1/1‑26 (MQ=255)                                                                                                                                                                                                                                ccTTCAGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaaccgtacattttcattccctcat        <  2:101137‑M1/251‑230 (MQ=255)                                                                                                                                                                                                                                     aGTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaaccgtacattttcattccctcatccatt   >  2:207406‑M1/1‑17 (MQ=255)                                                                                                                                                                                                                                      gTTTATGATCCACAACtctgctttgaacacttctcgattcagatggcatctggtgcaataagcgaatcgacgccccatgagaagggggtaatcgaacatgtcgtcgtcattgatggacaacttgatctgtgcgttgatggggaatggcagacccttaattgtggggaaggcgttcgatttgctgcagacgtcacgcatatctatcgtaatggtggggagcaaaccgtacattttcattccctcatccatta  <  1:312745‑M1/251‑236 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                            CATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACAGCAGGCGATGGTGATCACTTCGCTGTTTCCTTATGATCCACAACTCTGCTTTGAACACTTCTCGATTCAGATGGCATCTGGTGCAATAAGCGAATCGACGCCCCATGAGAAGGGGGTAATCGAACATGTCGTCGTCATTGATGGACAACTTGATCTGTGCGTTGATGGGGAATGGCAGACCCTTAATTGTGGGGAAGGCGTTCGATTTGCTGCAGACGTCACGCATATCTATCG  >  NC_000913/1506171‑1506650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑