Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	293,207	IS2 (–) +5 bp	intergenic (‑259/+9)	yagK ← / ← yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	293207 =	1 (0.020)	44 (0.730)	41/480	0.4	97.7%	intergenic (‑259/+13)	yagK/yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL
	?	NC_000913	381260 =	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	= 293211	2 (0.030)	57 (0.950)	52/480	0.2	96.5%	intergenic (‑263/+9)	yagK/yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL
	?	NC_000913	= 382590	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region

CGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGA  >  NC_000913/382346‑382838                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                          cGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑cc                                                                                                                                                                                                                                                    >  1:311649/1‑251 (MQ=31)     gTCCGGAGAGTAACGGAATAGCAGGGAGCTTCGTGAAAACGATAAAGCGTGACTAACTCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTTGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAAGATCTGCGGTAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATGCAATTG‑CCTAta                                                                                                                                                                                                                                                <  2:159427/251‑2 (MQ=11)     gTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTAGCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATc                                                                                                                                                                                                                                                <  1:211904/251‑1 (MQ=18)                      aTAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTT‑CCTATCAGGCAGTTTGCGCCAAt                                                                                                                                                                                                                               <  1:301652/251‑1 (MQ=39)                          cAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACt                                                                                                                                                                                                                           <  1:464237/251‑1 (MQ=255)                            gagagCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTAc                                                                                                                                                                                                                         <  1:642647/251‑1 (MQ=255)                            gagagCTTCGTGAAAACGATAAAGCGTGACTACACCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGATCATTATAACTAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCTCTAc                                                                                                                                                                                                                         <  2:586654/251‑1 (MQ=255)                            gagagCTTCGTGAAAACGAAAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTAc                                                                                                                                                                                                                         <  2:37520/251‑1 (MQ=255)                              gagCTTCGTGAAAACGATAAAGCGTGACTAAATCAGTAGCATGCCCAAACCAGGCGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCAGCCGCATAGTGCGCTGGGTTATCGCGCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGTCAATCACTACCg                                                                                                                                                                                                                       <  2:185632/251‑1 (MQ=255)                                     gTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCATGACCGGACCCTg                                                                                                                                                                                                                >  1:188745/1‑251 (MQ=255)                                                 aaGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTACCGGCAGCAAAGAAACTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCAcc                                                                                                                                                                                                    >  1:249087/1‑251 (MQ=255)                                                   gCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCAt                                                                                                                                                                                                  <  1:168671/251‑1 (MQ=255)                                                   gCGTGACTACATCAGTATCATGCCCAAACCAGACGGGGTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCAt                                                                                                                                                                                                  <  2:196193/251‑1 (MQ=255)                                                     gTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACAGCACCATg                                                                                                                                                                                                 >  1:563491/1‑250 (MQ=255)                                                       gACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGc                                                                                                                                                                                                       >  2:263557/1‑242 (MQ=255)                                                       gACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGc                                                                                                                                                                                                       <  1:263557/242‑1 (MQ=255)                                                           caaTCAGTTTCAGGCCCAAACCCGATGGGTTAACGGCAGCAAAGAACCATGCAGAGGAGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCGTGGAATGGGTTAAGTGATAACAGATGGCTGGAAATATATGGGCAAATCCAATTA‑CCTATCAGGTAGATTGTGCCAATCACTACCTGACCCTGAATATCTGCATCATGattaata                                                                                                                                                                                          <  2:93805/249‑7 (MQ=14)                                                           aCATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTCTAACGAATGGCATCCGAATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCCGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAAt                                                                                                                                                                                           >  1:655237/1‑250 (MQ=255)                                                           aCATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAAt                                                                                                                                                                                           <  1:85419/250‑1 (MQ=255)                                                               cAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACggg                                                                                                                                                                                      <  1:212585/251‑1 (MQ=255)                                                               cAGTATCATGCCCAAAACAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACgg                                                                                                                                                                                       <  1:354077/250‑1 (MQ=255)                                                                aGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGt                                                                                                                                                                                     >  1:33121/1‑251 (MQ=255)                                                                 gTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCCGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGt                                                                                                                                                                                     >  2:530581/1‑250 (MQ=255)                                                                   aTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTAtt                                                                                                                                                                                  >  2:112921/1‑251 (MQ=255)                                                                      aTGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTcgc                                                                                                                                                                               <  2:33121/251‑1 (MQ=255)                                                                       tGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTcgcg                                                                                                                                                                              >  1:178860/1‑251 (MQ=255)                                                                        gCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCgcgc                                                                                                                                                                             <  1:122890/251‑1 (MQ=255)                                                                             aaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTCCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATa                                                                                                                                                                        <  1:43349/251‑1 (MQ=255)                                                                               ccAGACGGGTTAACGGCAGCAAAGAACCTTGCAGTGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGATAAGTGATAACAGAAGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATAAGGCAGTTTGCGCCAATCACTACAGGACCCTGAATAACGGCACAATGAACAATACGGGTATTCGGGCCGATaac                                                                                                                                                                      >  1:171109/1‑251 (MQ=17)                                                                               ccAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATaac                                                                                                                                                                      >  1:19003/1‑251 (MQ=255)                                                                                    cGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACtt                                                                                                                                                                 >  1:116224/1‑251 (MQ=255)                                                                                                                gagGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTg                                                                                                                                     <  1:356753/251‑1 (MQ=255)                                                                                                                   gCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTc                                                                                                                                  <  1:465522/251‑1 (MQ=255)                                                                                                                                ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGAAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAat                                                                                                                      >  1:416775/1‑250 (MQ=255)                                                                                                                                ataACAAATGGCCTCCTCAAAGTGCGCTGGTTTATCTCGCGCCACGGGAATATCTACGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGTACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGTCTATAACAACTTCACCTGCAGTTTCATCAATAATTACCTTGTCTGCAATCTGAata                                                                                                                     <  2:307241/251‑1 (MQ=25)                                                                                                                                               cGCATAGTGCGCTGGGTTAGCGCTCGGCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATGCGGGTATGCGCGCCGATAACAACTTCACCATCAGTGTCATCAATAATTACCTGGTCTGCAATCTGAATATTGTTCTCTTTAACa                                                                                                      <  2:108806/251‑1 (MQ=37)                                                                                                                                                     gTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGc                                                                                                <  1:261326/251‑1 (MQ=255)                                                                                                                                                     gTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGc                                                                                                <  1:456251/251‑1 (MQ=255)                                                                                                                                                        cgcTGGGTTATCGAGCGCCCCGGGAATATCTGCGTCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCGGGAAATATAGGGGCAAATCCAATTA‑CCCATCAGGCAGTTTGCGCCAATCACTACCTGACCCTGAATAACGGCACCATGACAAATTCGGGTATTCGCTCCGATAACAACTTCCCCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATGTTTCTCTCTAACATGATGCTTc                                                                                             <  2:655237/251‑1 (MQ=37)                                                                                                                                                                     ctcgcCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTc                                                                                 >  1:426626/1‑250 (MQ=255)                                                                                                                                                                       cgcCACGGGAATATCTGTGGAAGCGGGCTTGTAATGTGTTAAGGTATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCATGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATTACAAATACGGGTATTCGCGCCTATAACAACTTCACCTGCAGTTTCATCAATAATTTCCTGGTCTGCAATCTGAATATGTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAg                                                                               <  2:367194/250‑1 (MQ=38)                                                                                                                                                                         ccACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAACTCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTc                                                                            >  1:38082/1‑251 (MQ=255)                                                                                                                                                                                       gCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGa                                                                  <  1:73969/247‑1 (MQ=255)                                                                                                                                                                                         ggCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGCTTTTCAGTTCCTGTGACAGAAGGTTg                                                            <  2:116224/251‑1 (MQ=255)                                                                                                                                                                                             gCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATAAAATAA‑CCTATCAGGCAGTTTGAGCCAATCACTACCGGACACTGAATAACGGAACCATGAAAAATAAGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCACTAATTAACTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTACTGTGACATAAGGTTgggc                                                         >  1:617853/1‑249 (MQ=255)                                                                                                                                                                                              cGGGCTTGTAAAGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTTCGCCAATCACTACCGGACCCTGAATAACGGCACCATAACAAATACGGGTATTCGCGCCGCTCACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATCTTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACTGACGGTTGGGact                                                       >  2:523281/1‑249 (MQ=255)                                                                                                                                                                                               gggCTTGTAATGGTTTAAGTGATAATAGATGTCTGGAAATAAAGGGGCAAAACCA‑TTATCCTATCAGTCAGTGTGCGCCAATCACTACCGGACCCTGAATAACGGCACCAATACAAATTCGGTTATTCGCGCCGATAACAACTTCACCTGCATTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTTTTTAACATTAAGCTTCAGATAGTTTTTCAGGTCCTGTGACAGAAGGTTGGGAATa                                                      <  2:359317/251‑1 (MQ=255)                                                                                                                                                                                                 gCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATa                                                      >  1:420082/1‑249 (MQ=255)                                                                                                                                                                                                                 gTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTTCCGGACCCTGAAGAACGGCTCCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGGCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTccac                                    <  2:48383/251‑1 (MQ=255)                                                                                                                                                                                                                         aGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTGCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCgg                            <  2:311649/251‑1 (MQ=255)                                                                                                                                                                                                                                   aaaTATTGGGGCAAATCCAATGA‑CCTATCATGCAGTTTGCTCCAAACACTACCGGACCATGAATACCGGCACCATGACAAATACTGGTATTCGCTCCGATAACAACTTCCCCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTGTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCtggt                  <  1:418348/251‑1 (MQ=255)                                                                                                                                                                                                                                   aaaTATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCgggt                  <  1:418361/251‑1 (MQ=255)                                                                                                                                                                                                                                                   ccAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGa  <  1:112921/251‑1 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                          CGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA‑CCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGA  >  NC_000913/382346‑382838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.