Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	293,207	IS2 (–) +5 bp	intergenic (‑259/+9)	yagK ← / ← yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	293207 =	1 (0.020)	44 (0.730)	41/480	0.4	97.7%	intergenic (‑259/+13)	yagK/yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL
	?	NC_000913	381260 =	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	= 293211	2 (0.030)	57 (0.950)	52/480	0.2	96.5%	intergenic (‑263/+9)	yagK/yagL	uncharacterized protein YagK/resolvase‑like catalytic domain‑containing protein YagL
	?	NC_000913	= 382590	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region

TTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/292963‑293211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCGCAC  <  NC_000913/382590‑382343                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCCGGGCTATTCCTGGTCACTGTTGTCGGCATATACTGGTATCAGATTTTAGTACGGCCATACTGATCTGATTACTACTCTTACTGGTGAATAAAGGTAGTAAGAGAACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTACAAAGTTAATCTGCAATTAGCTG                                                                                                                                                                                                                                                        >  1:593259/1‑251     GTCCTACTGTCTATAGCAGACCGGACAGGGATGCCATACAGGCAGGGTTATTCCTGGTCACTGTTGTCGGTATATCCTGTTAACAGATTTTAGTTAGGACATACTGATCTGATTACTACTCTTACGGGTGAATACAGGTAGTAAGAGTACACAATTCCAGTATATAATACCTATCCAACATCTAAATTTGAGACGTAGTTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGTAATTAGCTGGATT                                                                                                                                                                                                                                                    <  2:393048/251‑1                      AGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCC                                                                                                                                                                                                                                     >  1:95841/1‑249                              CAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGT                                                                                                                                                                                                                           >  1:67511/1‑251                                   ATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCA                                                                                                                                                                                                                      <  1:147793/251‑1                                      CCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                                                                                                                                                                                   <  1:546620/251‑1                                             ccggtcttTATTCCTGGTCACTGTTGTCGGTATATACTGGTACCAGATTTGAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCA                                                                                                                                                                                                             <  2:124748/242‑1                                                AGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGATATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATCATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTTCTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTGATCACTTAACCCATTAC                                                                                                                                                                                                         <  2:198582/251‑1                                                    CTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCA                                                                                                                                                                                                             >  1:124748/1‑243                                                         cctgttcgtTGTTGTTGGTATATACTGTTATCAGATTTTAGTTCGTACATACTGATCTGAATACGTCTCTTTCTTGTGAATATAGGTAGTAAGAGGACACAATGCTATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTTCAATTAGCTGGATGTGCCCCTATATTTCCAGACATCTGTTATCACTTATCCCATTACAAGCCCGCT                                                                                                                                                                                                <  2:593259/242‑1                                                                      ggcgtTATATTCTGGGAACAGATTTTAGTACGGACATATTGATCTTATTACTACTCTTTCTGGTGAATTCAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCAAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTTTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTTTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTC                                                                                                                                                                                   <  2:631842/246‑1                                                                                      ATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATA                                                                                                                                                                    >  2:479445/1‑250                                                                                         AGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGATGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATACCCC                                                                                                                                                                >  1:47834/1‑251                                                                                             TTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGC                                                                                                                                                             <  1:468617/250‑1                                                                                                AGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC                                                                                                                                                         >  1:388319/1‑251                                                                                                     GGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGC                                                                                                                                                    >  1:283065/1‑251                                                                                                               ATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATT                                                                                                                                          >  1:307258/1‑251                                                                                                                  TGATTACTACTCTTACTGGTGAATACAGGTAGAAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGATAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATCTTTCCAGACTTCTGTTATCACTTAACCCATTACAAGCCCGATGCCGCAGATATTCACGTGGCGAGCGATAACCCAGCGCACTATGAGGATGCCATTCGT                                                                                                                                       >  2:677212/1‑251                                                                                                                  TGATTAATACTCTTACTGGTGAATACAGGTAGTAAGAGTAAACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCACTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGAAATTCCCGTGGCGAGCGCTAACCCAGCGCACTCTGCGGATCCAATTCGT                                                                                                                                       >  2:302170/1‑251                                                                                                                           CTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCT                                                                                                                              >  2:186433/1‑251                                                                                                                             CTTACTTGGGAATACAGGTATTAAGAGTACACAATGCCATTATATAATCCCTATCCAACATCTAAATTTGATACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTTCTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCTCTATGCGTATGCCTTTCGTTATAATGC                                                                                                                               <  2:437364/248‑1                                                                                                                                ACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGTTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAAC                                                                                                                         <  1:404616/251‑1                                                                                                                                ACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGTTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAA                                                                                                                          <  1:459132/250‑1                                                                                                                                               TAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC                                                                                                          >  1:319280/1‑251                                                                                                                                                        TACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCC                                                                                                 >  2:645277/1‑251                                                                                                                                                              ATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAAC                                                                                           >  1:154994/1‑251                                                                                                                                                                gaCATTATATAAGACCAATCCAACATCTAAAGTTTAGACGAAGGTATCCCCAGCCTGTGATTGCTGTTAAAAAGTTGCTCTGCAATTAGCTGGATTTGCCCCTATTTTTCCAGACATCTGTTTTCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGTTGAGCGATCACCCAGGGCACTAGGCGGATGCCATTCGTTATAATGCTCTAACGCCTCTGCAAGGTTCCTTGCTGCCGTTATCCC                                                                                         <  2:380754/249‑1                                                                                                                                                                       TATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTTCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGT                                                                                  >  2:489567/1‑251                                                                                                                                                                        ATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTT                                                                                 >  1:358142/1‑251                                                                                                                                                                                  TCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGAT                                                                       >  1:218836/1‑251                                                                                                                                                                                          CTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTACCCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCATCTGGTTTGGGCATGATACTGTTGT                                                               >  2:396981/1‑251                                                                                                                                                                                            AAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGT                                                               <  1:91353/249‑1                                                                                                                                                                                             AATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGT                                                            >  1:249327/1‑251                                                                                                                                                                                             AATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGT                                                            >  1:210353/1‑251                                                                                                                                                                                               TTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTC                                                           >  1:646677/1‑250                                                                                                                                                                                                   AGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCT                                                      <  1:629931/251‑1                                                                                                                                                                                                     ACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTT                                                    >  1:453215/1‑251                                                                                                                                                                                                      CGAAGGTAGCCCCAGCCTGTTATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTA                                                   <  2:587154/251‑1                                                                                                                                                                                                        AAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATC                                                 <  1:673649/251‑1                                                                                                                                                                                                         agggaaCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATCTTTCCAGACATCTGTTATCACTTAACCCATTACCAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCACGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAAAGCCTCTGCAACGTTCTTTGCTGCCGTTACCCCGTCTGGTTTGAGCATGATACTGCTGTAGTCGCGCTTTATCG                                                >  2:316809/7‑251                                                                                                                                                                                                          GGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGT                                               >  1:634435/1‑251                                                                                                                                                                                                           GTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTT                                              >  2:88940/1‑251                                                                                                                                                                                                                CCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCAC                                         <  2:319280/251‑1                                                                                                                                                                                                                CCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCAC                                         <  1:645277/251‑1                                                                                                                                                                                                                 CCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGT                                                                                               >  2:532517/1‑196                                                                                                                                                                                                                 CCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGT                                                                                               <  1:532517/196‑1                                                                                                                                                                                                                      CTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCT                                   >  1:514576/1‑251                                                                                                                                                                                                                           ATGGCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTG                              >  2:164570/1‑251                                                                                                                                                                                                                              GCTGTTACAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATACTGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCT                                                                                     >  2:39262/1‑193                                                                                                                                                                                                                              GCTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCT                                                                                     <  1:39262/193‑1                                                                                                                                                                                                                               CTGTTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTAT                          >  2:529453/1‑251                                                                                                                                                                                                                                  TTAAAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATCTTTCCAGACATCTGTTATCACTTAACCCATTCCAAGCCAGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGCTGCAATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCAGTTAACCCGTCTGGTTTGGGCATGCTACTGATGTAGTAACGCTTTACCGTTTTCACGACGCTCCATGCTATTCC                       >  2:263821/1‑251                                                                                                                                                                                                                                     AAAAGTTACTCTGCAATTAGCTGGATTTGCCCCTATAGTTCCAAACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATCCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTT                    <  2:67511/251‑1                                                                                                                                                                                                                                      AAAGTTACTCTGCAATTAGCTGGATTTGCCACTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCACGTGGCGATCGATAACCCAACGCACTATGCGGATGCCATTCGATATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGTGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCGCTCTGCTATTCCGTT                    >  2:678428/1‑250                                                                                                                                                                                                                                                TGCAATTAGCTGGATTTGACCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATACCCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAAACCGTCTGGTTTGGGCATGATACTGATGTAGCCACGCTTTATCGTTTTCACGACGCTCTCTGCTATTCCGTTACTCTCCGGAC         >  2:120932/1‑251                                                                                                                                                                                                                                                TGCAATTAGATGGCGTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCAGCCGCAGCTATTCCCGTGGCGAACGATAACCAAGCGCACTATGCGGAAGCCATTCGTTATAATGCTCGCACGCCACTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGAAACAGATGTAGTCCCGCTTTATCATGTTCACGAGGCTCTCTGCTATTCCGTTACTCCCCGGA          >  2:379880/1‑250                                                                                                                                                                                                                                                       AGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCAGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCACTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGATATTCCGTTACTCTCCGCTCTCCGCcc  >  2:454832/1‑249                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/292963‑293211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCGCAC  <  NC_000913/382590‑382343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.