Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,252,952 IS2 (–) +5 bp coding (42‑46/357 nt) yhaI → putative inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)34 (0.930) 32/488 0.2 97.1% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 3252952 = 1 (0.030)coding (42/357 nt) yhaI putative inner membrane protein
* ? NC_000913 = 3187426NA (NA)23 (0.630) 22/488 0.6 95.8% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 = 3252956 1 (0.030)coding (46/357 nt) yhaI putative inner membrane protein

TTTTATCATTATGTTGATGAATGAATAATTTACTAATGTTTATTTAAAATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTT  >  NC_000913/3252706‑3253201
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
ttttATCATTATGTTGATGAATGAATAATTTACTAATGTTTATTTAACATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCATTGGTATTTGTCCGTCTTAAAAAATTATGTTGGTTTCTCTg                                                                                                                                                                                                                                                       >  2:261528/1‑251 (MQ=255)
    tacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTcg                                                                                                                                                                                                                                                   >  2:141329‑M2/243‑251 (MQ=255)
    tacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTcg                                                                                                                                                                                                                                                   >  1:32082‑M2/243‑251 (MQ=255)
    taagccagagaaataactggctggcttcgacaccatgttgccgggcaacgagggacaccgtcatccccggttcaaagctctgctgaacaattgctatcttttcctgtgtggtacgccgtctgcgtttctccggacctaagacatcaatcatctgttctccaatgattagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggctagtctaCTCTGgta                                                                                                                                                                                                                                                    <  2:324307‑M2/8‑2 (MQ=255)
      cATTATGTTGATGAATGAATAATTTACTAATGTTTATTTAAAATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatt                                                                                                                                                                                                                                                 >  1:326440‑M2/1‑245 (MQ=255)
         cagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCAc                                                                                                                                                                                                                                              <  1:124671‑M2/14‑1 (MQ=255)
          agagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCAcg                                                                                                                                                                                                                                             <  1:223883‑M2/15‑1 (MQ=255)
                     tgaatAATTTACTAATGTTTATTTAAAATATTTCAATGTAGTTATATAATTTACCTATAAAAAATAACCATGTATTTATCTTAAATATAAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGAATTTAGTCACTATTAATTAAAGGGATGTTTTTATGAAGAGGTATTTTTCCGTATTAAAAAATTTTGTTGGTTTCTCTTtggatttgccactatatttc                                                                                                                                                                                                                                   <  2:148025‑M2/250‑21 (MQ=255)
                          ggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACt                                                                                                                                                                                                                               <  1:76891‑M2/29‑1 (MQ=255)
                                   cccatgttgccgggcaacgaggtagaccgtcacccccggttcaaagctctgctgaacaagtgcgatcttttcctgtgttgtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactattattaagactatctcttatttaagtgatattggttgtctggagattcagggggcttgtctaCTTTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTAct                                                                                                                                                                                                                    <  2:32082‑M2/40‑1 (MQ=255)
                                    tGTTTATTTAAAATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATACGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGCTGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                    <  1:418045‑M2/250‑36 (MQ=255)
                                     gTTTATTTAAAATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcac                                                                                                                                                                                                                  <  1:46421‑M2/251‑38 (MQ=255)
                                             cgggcaacgagggataccgtcatccccggttcaaagctctgctggacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacctcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTAGTACAGAGTACTGGGTGTTTACTATGATTAACg                                                                                                                                                                                                          >  2:424045‑M2/202‑251 (MQ=255)
                                             aaaaTATTTCAATGGCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATACCATCCGAAAAAGAAAGATACGAATAGCATTTACACTATACCCGGTATAGACTTTCGTCACTTTTAATTAAAGGTATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatctcttaactca                                                                                                                                                                                                          >  2:8162‑M2/1‑206 (MQ=255)
                                                gcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGcc                                                                                                                                                                                                        >  1:306217‑M2/199‑250 (MQ=255)
                                                  aacgagggagaccgtcagccacggttcaaagctcggctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccttaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatatgggttttctggagattcaggtggccagtattCTCTGGTCGCGCACGCCGTAAAGAGTTCCGGATGGTTACTCTGATTAACGCCAtc                                                                                                                                                                                                     <  1:263176‑M2/55‑1 (MQ=255)
                                                       gggcgaccgtcatccccggttcaaagctctgcgtaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttcgccggccctaagacatcaatcatctgtgctccaatgactagtctaaaaactagtattaagactatcacgtatgtaagtgatatttgttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCTTCTTCgg                                                                                                                                                                                                <  2:289236‑M2/60‑1 (MQ=255)
                                                        ggagatcgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttggctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGgc                                                                                                                                                                                               <  1:149061‑M2/61‑1 (MQ=255)
                                                        aTGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg                                                                                                                                                                                               <  1:223521‑M2/251‑57 (MQ=255)
                                                             ccgtcatccccggttcaaagctctgctgaacaattgcgatcttttccggtgtggtacgccgtctgcgtttctccggccctaagtcatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatagtggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACGGGATGTTTACTCTGATTAACGCCATCGTCGGCGCtat                                                                                                                                                                                          <  2:225100‑M2/66‑1 (MQ=255)
                                                               tatataAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                                                                                                                        <  2:220051‑M2/251‑64 (MQ=255)
                                                                atataAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGCTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTAATAACAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                                                                                                                        <  1:270238‑M2/250‑64 (MQ=255)
                                                                   taAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAATTTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcccttaccccattacaagcccgctgccgc                                                                                                                                                                                        <  1:88501‑M2/247‑64 (MQ=255)
                                                                              taAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc                                                                                                                                                                         <  1:154309‑M2/251‑79 (MQ=255)
                                                                                     tAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat                                                                                                                                                                  <  1:743‑M2/251‑86 (MQ=255)
                                                                                            aattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcagctgttctccaatgactagtctaaaaactagtattaagactatcacttattgaagtgatattggttgtctggagattcaggggtccagtctaCTCTGGTCGCGCACTTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGTCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTGTAGGTCTg                                                                                                                                                           <  2:306217‑M2/97‑1 (MQ=255)
                                                                                                  aTCTTCAATCTCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAACATTTACACAATAACCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagaaatctgttatcacttacaccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcact                                                                                                                                                     <  2:92883‑M2/251‑99 (MQ=255)
                                                                                                     cttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctacaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagtgggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCTTCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTcc                                                                                                                                                   >  2:90925‑M2/146‑250 (MQ=255)
                                                                                                       tttcctgtgtggtacgccgtctgcgttgctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCat                                                                                                                                                 <  1:96617‑M2/107‑1 (MQ=255)
                                                                                                          cctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATc                                                                                                                                              <  1:141329‑M2/110‑1 (MQ=255)
                                                                                                                  gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGc                                                                                                                                     >  1:372917‑M2/133‑251 (MQ=255)
                                                                                                                  ccTTTATAAAATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTCATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggttttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagctcactatgcggatgccattcg                                                                                                                                     <  1:38732‑M2/251‑115 (MQ=255)
                                                                                                                      gccgtctgcgattctcaggccctaagccatcaatcatctgttctccaatgactagtctaaacactagtattaagactatcacttatttaagtgatattggatgtctggagattcagggggcccgtctaCTCTGGACGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGAGCTATTATCCATGTCATTCAATTAATTTTAGGTCTGGAGCATCCATAACTTTCTATGCttt                                                                                                                                  >  2:362754‑M2/129‑250 (MQ=255)
                                                                                                                        cgtcggtgttgctccggcccgaagacagcaatcatctgttctccaatgactagtctaaatacttgtattaagactatcacttatttaagtgatattggttgtctggagattcagggtgccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTAGCAATGTCATTCAATTTATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTGAtt                                                                                                                               <  2:362170‑M2/125‑1 (MQ=255)
                                                                                                                           ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTAc                                                                                                                                                                                                                                <  1:380328‑M2/28‑1 (MQ=255)
                                                                                                                           ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTAc                                                                                                                                                                                                                                >  2:380328‑M2/124‑151 (MQ=255)
                                                                                                                              cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACTCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTgg                                                                                                                         <  1:435000‑M2/131‑1 (MQ=255)
                                                                                                                                           ctaagacagtaatcatttgttctccaaggactagtctaaaaactaggattaagactagcacttatttaagtgatattggttgtctggagattcagggggccagtcgaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGACATCGTCGGCGCTATTATCAATGTCATTCAATTGATGTTAGGTCTGGAGCtt                                                                                                                                                     <  2:237009‑M2/103‑1 (MQ=255)
                                                                                                                                             aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagaatataacttctttaagtgatcttgcttgtatggagattcagggggccagacaaCTCTGGACGAGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGACATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTGGGTCTGTAGCTTCCATATCTGTCTATGCTTTATTTGATGGAaaccttccttcact                                                                                                          >  1:257364‑M2/106‑248 (MQ=255)
                                                                                                                                             aagacatcaagcatctgttctccaaagactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTTATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGTAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTccc                                                                                                           <  2:389835‑M2/145‑1 (MQ=255)
                                                                                                                                                   tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGCTTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCcttt                                                                                                    >  2:367511‑M2/100‑250 (MQ=255)
                                                                                                                                                   aGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt                                                                                                     >  1:2626‑M2/1‑104 (MQ=255)
                                                                                                                                                               tctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATc                                                                                         <  1:262718‑M2/163‑1 (MQ=255)
                                                                                                                                                                  cccGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGATATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccg                                                                                     >  1:309319‑M2/1‑89 (MQ=255)
                                                                                                                                                                     ggAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtct                                                                                  <  1:334168‑M2/251‑166 (MQ=255)
                                                                                                                                                                              ttgcgtaACTTTTAATTAAAGGGAGGTTTTTTTGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaaccagcgcactatgcggatgccattcgttataatgctcgatcgcctctgcaaggttctttgctgccgttaacccgtctggtttggg                                                                          >  2:113947‑M2/4‑77 (MQ=255)
                                                                                                                                                                               ttCGGCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggc                                                                         >  1:261528‑M2/1‑76 (MQ=255)
                                                                                                                                                                                      cTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                                                                                                                      >  2:24186‑M2/1‑69 (MQ=255)
                                                                                                                                                                                      cTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                                                                                                                      <  1:24186‑M2/182‑114 (MQ=255)
                                                                                                                                                                                                  gggATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTgg                                                     <  1:228537/251‑1 (MQ=255)
                                                                                                                                                                                                     cacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGcc                                                  <  1:1332‑M2/202‑1 (MQ=255)
                                                                                                                                                                                                       gTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgcggccgttaacccgtctggtttgggcatgatactgatgtagtcacgcttt                                                 >  1:167301‑M2/1‑52 (MQ=255)
                                                                                                                                                                                                                 tgatattggttgtctggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCtttttt                                      >  1:2443‑M2/38‑251 (MQ=255)
                                                                                                                                                                                                                                ggagattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATtggc                       >  1:342698‑M2/23‑251 (MQ=255)
                                                                                                                                                                                                                                  agattcagggggccagtctaCTCTGGTCGCGCACGTCGTAAAGAGTAATGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTCGGTCTGGAGCTTCCATATCTGTCTCTGCTTTATTTGCTGGCTACATTACTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATtgtctg                     >  2:50100‑M2/21‑251 (MQ=255)
                                                                                                                                                                                                                                                 ggTTTCTCTGtgtatttgcccctatattcccagacatctgttaacacttaacccatgacaagcccgctgccgcagatattcccgtggcgagcgataacccagggcactatgcggatgccattcgttagaaggctcgaacgcatctgcaaggttcttggctgccgttaacccgtctgggttgggcatgatactgatgtagtcacgctttatcggtttcacgaagctctctgctattccgttactctccgga       >  2:228298‑M2/1‑10 (MQ=255)
                                                                                                                                                                                                                                                 ggTTTCTCTGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccgga       <  1:228298‑M2/250‑241 (MQ=255)
                                                                                                                                                                                                                                                  tctaCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGtt     >  1:293036‑M2/5‑251 (MQ=255)
                                                                                                                                                                                                                                                     aCTCTGCTCGCGCACGTCGCAAAGAGTCCTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCCATGTCATTCAATTGATTTTCGGTCTGGAGCTTCTATATCTGTCTATGCTTTATTTGCTGGCAACCTTTCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACTGACCATTCAGGTGACTGGGCCTTGCTCTTTTTTGTTCCGTTTCTTGGCTGGCTCGTGCTTCTGGttttt  >  2:410925‑M2/2‑251 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
TTTTATCATTATGTTGATGAATGAATAATTTACTAATGTTTATTTAAAATATTTCAATGTCGTTATATAAATTACCTATAAAAAATAACCATGTATTTATCTTAAATATCAAAACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTT  >  NC_000913/3252706‑3253201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.