mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,173,364 | 0 | C | . | 79.2% | 54.6 / 17.4 | 24 | intergenic (‑491/+918) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| * | NC_000913 | 2,173,363 | 0 | C | . | 75.0% | 45.5 / 22.4 | 24 | intergenic (‑490/+919) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| * | NC_000913 | 4,548,823 | 0 | A | C | 41.3% | 54.2 / 12.7 | 48 | T6P (ACC→CCC) | fimH | type 1 fimbriae D‑mannose specific adhesin |
| * | NC_000913 | 505,440 | 0 | C | A | 31.2% | 38.9 / 10.6 | 32 | A176E (GCA→GAA) | ushA | 5'‑nucleotidase/UDP‑sugar hydrolase |
| * | NC_000913 | 4,256,061 | 0 | C | T | 30.0% | 35.8 / 12.4 | 40 | E136K (GAA→AAA) | plsB | glycerol‑3‑phosphate 1‑O‑acyltransferase |
| * | NC_000913 | 3,914,553 | 0 | A | G | 22.9% | 122.4 / 11.4 | 62 | H216H (CAT→CAC) | glmU | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |