| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,235,323 | IS2 (+) +5 bp | coding (386‑390/720 nt) | fadR → | DNA‑binding transcriptional dual regulator FadR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1235323 = | 0 (0.000) | 20 (0.760) | 19/490 | 0.4 | 100% | coding (386/720 nt) | fadR | DNA‑binding transcriptional dual regulator FadR |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1235327 | 0 (0.000) | 15 (0.570) | 13/490 | 0.7 | 100% | coding (390/720 nt) | fadR | DNA‑binding transcriptional dual regulator FadR |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
TTACAGCGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTACCACAAACTGTCGGCGTTGTGCAGTGAAGGCGCGC > NC_000913/1235091‑1235550 | ggaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgcgcgccacgggaatatctgcggcagcgggcttgtaatgtgttaagtgataacagatggctggaaatatagtggcaaatccaCTACCGCTAATGAAGTGGc > 2:45871‑M1/233‑251 (MQ=255) cGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatct > 2:194927‑M1/1‑231 (MQ=255) cGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatct < 1:6207‑M1/251‑21 (MQ=255) agagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGAt < 1:68327‑M1/32‑1 (MQ=255) gtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCg < 1:62957‑M1/42‑1 (MQ=255) aCATGGCAAGCCGACGAAGGTGAATAATTTCTGGGCAACTTCCGGTTTAAATATCCTTGAACCACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat > 2:267441‑M1/1‑199 (MQ=255) aCATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat > 1:127052‑M1/1‑199 (MQ=255) cccagacgggttaacggcagcaaagaacctggcagaggcgttcgagcattataacgaatgtcatccgcatagtgcgctgggttatcgctcgccacggtaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTTGCCGATCACGCCGATGTCGTTGCCGATCTGGATTACAACATATTCCGCTGCCTGGCGTTTGCTTcc > 2:131840‑M1/169‑251 (MQ=255) acgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCa < 1:189333‑M1/87‑1 (MQ=255) gggttaacggcagcaaagaacctggcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAAcc > 1:162465‑M1/162‑251 (MQ=255) aacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGAtt > 2:62957‑M1/157‑251 (MQ=255) cggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctggtttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgagaacagatgtctggaaatataggggcaaatccaCTACCGCTAATTAAGGGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTa > 1:267252‑M1/155‑251 (MQ=255) caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgacacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCCCTAATGACGTGGCCGATCACGCCGATGCATTTGCCGAGCTGGATTACAACATATTCCGCGGCCAGGCGTTAGATTCCGGCAACCCGATTTACGGTCt < 1:175580‑M1/103‑1 (MQ=255) aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTg < 1:218058‑M1/104‑1 (MQ=255) gtatcCTTGAAACACTGGCGCGACTGGATCAAGAAAGTGTGCAGCCGTTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgt > 2:43730‑M1/2‑149 (MQ=255) gggcgttcgagcattataacgaatggcagccgcatagtgcgctgggttatcgcgcgccacgggaatatctggggcagcgggcttggaatgggttaagtgataaaagatgcctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTTCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTGTGCTTCCGGCAACCCGATTTACGGTCTGATGCTTAACGGGAt > 2:224272‑M1/134‑251 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgttaatatctgcggcagcgggcttgtaatgggtgaagtgataatagatgtctgtaaatataggggtaaatccaCTACTGCTAATGAAGTTGCCGATCACGCCGATGCTTTTGCCGAGCTGGATTACATCATATTCCGCGGCGTGGCTTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGa > 1:244088‑M1/132‑251 (MQ=255) cgaatggcatccgcatagtgcgctgggttatcgctcgcaacgtgaatatctgcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatatagggtcaaatccaCTACCGCTAATGAAGTTGCCGATCTCGCCGATGCCTTTGCCGAGCGGGTTTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGTATGAAAGGGTTTTATACGCGt > 2:264884‑M1/115‑251 (MQ=255) atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTACCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGACAGGGCTGTATACGCGTAtt < 2:7204‑M1/140‑1 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaaaataggggcaaatccaCTCCCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCATTAttt > 2:90224‑M1/98‑251 (MQ=255) cgctgcgttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGc < 2:134140‑M1/157‑1 (MQ=255) tAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgtt > 1:51619‑M1/1‑94 (MQ=255) atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCgg < 1:28334‑M1/165‑1 (MQ=255) ggctctccccgggaagatctgcggcagtgggcttgtaatgggtgaagtgataacagatgtctggaaatagaggggcaaatccaCTACCGCAAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGgac > 2:6434‑M1/84‑249 (MQ=255) cGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgtagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagct < 2:27343‑M1/250‑168 (MQ=255) cGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaac < 1:40390‑M1/251‑174 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcacatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTAcc < 1:155772‑M1/195‑1 (MQ=255) gCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta > 2:60188‑M1/1‑50 (MQ=255) gCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:60188‑M1/156‑107 (MQ=255) cACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccgg > 2:71280‑M1/1‑49 (MQ=255) ttCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatgg > 1:57135‑M1/1‑41 (MQ=255) gTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGATACCtagactggccccctgaatctccagacaaccaatatccattaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgt > 2:238686‑M1/1‑38 (MQ=255) aGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCtagactggcaccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagcctagtcattggagaaccgatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagc > 1:230391‑M1/1‑35 (MQ=255) gatgtcgggaaatataggggcaaatccaCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTACCACAAACTGTCGGCGTTGTGCAGTGAAgg > 1:120340‑M1/29‑251 (MQ=255) cGATAAAGCGCAGGAAGTGCTGGCTACCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccgtggatgacggtctccctcgttgcccggcaacatggtgtagcagccagc < 2:51619‑M1/251‑224 (MQ=255) cTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGgtc > 2:94200/1‑144 (MQ=255) | TTACAGCGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTACCACAAACTGTCGGCGTTGTGCAGTGAAGGCGCGC > NC_000913/1235091‑1235550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |