| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,235,323 | IS2 (+) +5 bp | coding (386‑390/720 nt) | fadR → | DNA‑binding transcriptional dual regulator FadR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1235323 = | 0 (0.000) | 20 (0.760) | 19/490 | 0.4 | 100% | coding (386/720 nt) | fadR | DNA‑binding transcriptional dual regulator FadR |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1235327 | 0 (0.000) | 15 (0.570) | 13/490 | 0.7 | 100% | coding (390/720 nt) | fadR | DNA‑binding transcriptional dual regulator FadR |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
CCTTCACTGCACAACGCCGACAGTTTGTGGTAGAAGCCCAGCGCCAGACTGCGCGCTTCCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1235545‑1235323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTAC > NC_000913/1467910‑1468141 CCTTCACTGCACAACGCCGACAGTTTGTGGTAGAAGCCCAGCGCCAGACTGCGCGCTTCCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCCGACATC > 1:120340/1‑251 GGTAGAAGCCCAGCGCCAGACTGCGCGCTTCCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATGTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCC < 1:155772/250‑1 gTCCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTTGCGGTAGTGGATTTGCCCCTCTATTTCCAGACATCTGTTATCACTTCACCCATTACAAGCCCACTGCCGCAGATCTTCCCGGGGAGAGCc > 2:6434/2‑249 CCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGAT < 1:28334/250‑1 GCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACGCAGCG < 2:134140/251‑1 AAATAATGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGGAGTGGATTTGCCCCTATTTTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC > 2:90224/1‑251 AATACGCGTATACAGCCCTGTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGTAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCAT < 2:7204/251‑1 ACGCGTATAAAACCCTTTCATACCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAAACCCGCTCGGCAAAGGCATCGGCGAGATCGGCAACTTCATTAGCGGTAGTGGATTTGACCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACACGCCCGCTGCCGCAGATATTCACGTTGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCG > 2:264884/1‑251 TCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAAAGCCACGCCGCGGAATATGATGTAATCCAGCTCGGCAAAAGCATCGGCGTGATCGGCAACTTCATTAGCAGTAGTGGATTTACCCCTATATTTACAGACATCTATTATCACTTCACCCATTACAAGCCCGCTGCCGCAGATATTAACGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGC > 1:244088/1‑251 ATCCCGTTAAGCATCAGACCGTAAATCGGGTTGCCGGAAGCACACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGAAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGGCATCTTTTATCACTTAACCCATTCCAAGCCCGCTGCCCCAGATATTCCCGTGGCGCGCGATAACCCAGCGCACTATGCGGCTGCCATTCGTTATAATGCTCGAACGCCc > 2:224272/1‑250 CAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT < 1:218058/251‑1 AGACCGTAAATCGGGTTGCCGGAATCTAACGCCTGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAATGCATCGGCGTGATCGGCCACGTCATTAGGGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGTCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG < 1:175580/251‑1 TAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCCCTTAATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTCTCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAACCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCG > 1:267252/1‑251 AATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTT > 2:62957/1‑251 GGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCCAGGTTCTTTGCTGCCGTTAACCC > 1:162465/1‑251 TGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGT < 1:189333/250‑1 GGAAGCAAACGCCAGGCAGCGGAATATGTTGTAATCCAGATCGGCAACGACATCGGCGTGATCGGCAACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTACCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGACATTCGTTATAATGCTCGAACGCCTCTGCCAGGTTCTTTGCTGCCGTTAACCCGTCTGGg > 2:131840/1‑250 CGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCAC < 1:62957/251‑1 ATCGGCGTGATCGGCCACTTCATTAGCGGTAGTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCT < 1:68327/251‑1 GCCACTTCATTAGCGGTAGTGGATTTGCCACTATATTTCCAGCCATCTGTTATCACTTAACACATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGCGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTcc > 2:45871/1‑249 CCTTCACTGCACAACGCCGACAGTTTGTGGTAGAAGCCCAGCGCCAGACTGCGCGCTTCCGGATTGGCGAAATAGTGACGACCAATACGCGTATACAGCCCTTTCATCCCGTTAAGAATCAGACCGTAAATCGGGTTGCCGGAAGCAAACGCCAGGCCGCGGAATATGTTGTAATCCAGCTCGGCAAAGGCATCGGCGTGATCGGCCACTTCATTAGCGGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1235545‑1235323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTAC > NC_000913/1467910‑1468141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |