| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,620 | IS5 (–) +4 bp | intergenic (‑261/‑32) | uvrY ← / → yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 11 (0.650) | 9/294 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1995623 | 0 (0.000) | intergenic (‑264/‑32) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU | |||||
| * | ? | NC_000913 | 1995620 = | 0 (0.000) | 9 (0.530) | 9/294 | 0.5 | 100% | intergenic (‑261/‑35) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
AGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGC > NC_000913/1995400‑1995864 | ccattaccagccttggggtaaaacggctctatgacttccaccatgttttgccatggcagaatctgctccacgagggacaagaaaatctcttttctgacctgccggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcctatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAAc < 1:406903‑M1/31‑1 (MQ=255) gggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAat < 1:18012‑M1/46‑1 (MQ=255) aCTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc > 1:297707‑M2/1‑193 (MQ=255) agaatctgctccatgcgggacaagaaaatctctttgctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgacgcatgatgaaccctgttctattgctccagatgacgaacatgatctcatagcagggacttgttcgcaccttccTTAATGAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTgg > 1:394966‑M1/164‑218 (MQ=255) gATTGTCCACAGTTATGGTCACGCACGTCACCAACGGCCTACCGGATCGTTTCACAGTAAGCCCCACGATGAAATGAGACAAAAATTGACTTTATTCAGCCAAAATGAAAATCAGCACGCTGAAAATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgactcagcctatttagaccgt < 1:407526‑M2/251‑115 (MQ=255) aGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTGTCACAGTAAGCCCTACGATGAAATGTGAAAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattgtttctcccgtaaatgccttgaatcagcctacttatcccgtttcttcgcca > 1:363992‑M2/1‑127 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCANAAAnnnnncannnnnn < 2:252085‑M1/42‑7 (MQ=255) cGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg > 1:417373‑M2/1‑112 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAATGTATTTTATAGCACTGCCGATATCACGCTCAAAAaacaa < 1:413262‑M1/107‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaagcatgatcgcatatcagggacttgttcgcaccttccTTAATTATCCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATtat > 1:201693‑M1/79‑140 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATCTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATg > 1:25083‑M1/51‑251 (MQ=255) aatttatTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactccgtcatttcatttcttcatgtttgagccgattttttctcccgtnaatnnnnngann < 2:251450‑M2/144‑98 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGc > 1:330243‑M1/45‑168 (MQ=255) aGCAAAAATGAAAATCAGCCCGCTGAATCTGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttaatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcattt < 1:284867‑M2/218‑179 (MQ=255) gCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaatacgcggcgaaattcttctcggctgcatcagtcctttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttctccccagtttttagt < 1:396771‑M2/190‑152 (MQ=255) aaaTGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag < 1:185358‑M2/144‑110 (MQ=255) aaaaTCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgcaacaggt < 1:382306‑M2/226‑197 (MQ=255) gCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggn > 1:44360‑M2/1‑23 (MQ=255) gTAACATTACggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttcgaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagc < 1:181025‑M2/250‑241 (MQ=255) cttccTTAATTAAACCGAACAATACGGGCAAAAAACATTCATGATAAAACTATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATAACGCTCAAAAAACAACCACTGCTATTTTTAGCAACGATTATGGTATAGTCAGCCGCCTTAACCTTTTTCACAGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCCAGAACTGGc < 1:431744‑M1/245‑1 (MQ=255) | AGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGC > NC_000913/1995400‑1995864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |