| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,237,684 | IS5 (+) +4 bp | coding (67‑70/1011 nt) | mglC ← | D‑galactose/methyl‑galactoside ABC transporter membrane subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2237684 = | 0 (0.000) | 27 (1.540) | 22/292 | 0.0 | 100% | coding (70/1011 nt) | mglC | D‑galactose/methyl‑galactoside ABC transporter membrane subunit |
| ? | NC_000913 | 2288919 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 2237687 | 0 (0.000) | 11 (0.630) | 9/292 | 0.5 | 100% | coding (67/1011 nt) | mglC | D‑galactose/methyl‑galactoside ABC transporter membrane subunit |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
ACACTTTGTTGGCGTTATCCATGGACTGCAATAATGTCGCAGCCACCACTGCCGCCAGCCCTACCTGACGACCAGCAGAAAGATCGGTCCCCTGGGTGACAATTAACCCTGCCACACCGAGCGCGATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGTATCGACAATTCCGGAAACGAGACCATTGCTCATGACCAGAATACGGTCTGTTATCCCTAACAACTCAGGCATTTCAGAGGAGATAATAATA > NC_000913/2237465‑2237913 | ggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgattcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGCCGTAAATACCGCCCTCTTTc > 1:96146‑M1/220‑251 (MQ=255) cacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatatcactaaaaactggggataacgccttaaatggcgaagaagcggtgtaaataggctgattcaaggcatttacgggagaaaaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcactttccCTCAAAGAACGACGTAAATACCGCCCTCTTTCAGgtaagta < 1:407136‑M1/41‑1 (MQ=255) natGGACTGCAATAATGTCGCAGCCACCACTGCCGCCAGACCTACCTGACGACCAGCAGCAAGATAGGTCCCCTGGGCGACAATTAACCCTGCCACACAGAGCGCGATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagtccctgatatga > 1:80591‑M1/2‑204 (MQ=255) caacctgtttcgggcggaccaaatgatacgtcagtgggagcgatctcactaataactggggatacagccttaaatggcgaagaagcggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacataaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTACGAAAAc < 1:258531‑M1/48‑1 (MQ=255) gcggaccaaatgatacgtcagtgggagagatctcactaaacactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCAc < 1:285666‑M1/66‑1 (MQ=255) cgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGaagccact < 1:6228‑M1/81‑4 (MQ=255) cgtcagtgggagagatctcactaaaaactggggataacgccttaaatggagaagcaacggtctaaataggatgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcaCTAACAGAACGACGTAAATCCCGCCCTCTTTCAGGACAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCt < 1:218578‑M1/81‑1 (MQ=255) aCCTGACGACCAGCAGAAAGATCGGTCCCCTGGGTGACAATTAACCCTGAAACACCGAGCGCGATCATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg > 1:218897‑M1/1‑161 (MQ=255) acgacCAGCAGAAAGATCGGTCCCCGGGGTGACAATTACCCCTGCCACACCGAGCGCGATAATAATACGCACCGATTACTGGGTGAGAATATTACTTAAGTTCAACAGATTTAAAAATTTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAgtaaggtgcgaacaagtctctgatatgatatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:208183‑M1/251‑96 (MQ=255) aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTGCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAaagacg > 1:325507‑M1/149‑250 (MQ=255) gcagAAAGATCGGTCCCCTGGGTGACAATTAACCCTGCCACACCGAGCGCGATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 1:430517‑M1/1‑149 (MQ=255) aaGATCGGTCCCCTGGGTGACAATTAACCCTGCCACACCGAGCGCGATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcagcatgagtcatcaacttaccttcgccgacagtgaattcagc < 1:297188‑M1/251‑108 (MQ=255) gATCGGTCCCCTGGGTGACAATTAACCCTGCCAAACCGAGCGCGATAATACTACGAAAAGATGACTGGGAGAGAATATTACTTAAGTTCAACAGACTTAAAACTGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagaccatgatatgag > 1:402870‑M1/1‑142 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCAAAGAACGACGTAAATACAGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAACGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCgttgttg < 1:217747‑M1/132‑1 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagacatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAAc < 1:307345‑M1/48‑1 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactnagtnagccnagnagaagttccccgcttnttcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCNNGNNNGNAAGAAAAc > 2:307345‑M1/118‑165 (MQ=255) ggtctaaataggatgattcaaggcatttacgggagaaacaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagcagaattttcccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGt < 1:74148‑M1/139‑1 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaacaatcggctcaaacatgaagaactgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGt < 1:383130‑M1/139‑1 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACTGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAATACGCAGAATTTCGTTTTGCTTTGTTGTTTTTGTa > 1:119883‑M1/112‑251 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaaaatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGTATCGACAAtt < 1:184070‑M1/149‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGc > 1:125147‑M1/102‑196 (MQ=255) gattcnnggnnnttnngggagaaaaaatcggctcaaacangaagaaatgaaatgactgagtcagccgagnanantttcnncgcntattcgcaccntccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAANANTTTTCTTATTTAAc < 2:330651‑M1/62‑1 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaattacttagtcagccgataagaagttccccgcttattctcaccttccCTAAAATAACAACTTAAATACCGTCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAAc > 1:330651‑M1/99‑160 (MQ=255) cgATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcat > 1:403084‑M1/1‑100 (MQ=255) caaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGTTAATTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAaagacgcaag > 1:186853‑M1/96‑201 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcgccgcttattcgcgccgtccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGTGAAGCCCCTTATCGTAAAGGTGCAAAGACTCAAGACGCAGAATTTCGGTTTGCGTTGTTGCTTTTGTATCGACAATTCCGGAAACGAGACCATTGCTCa > 1:191513‑M1/81‑251 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAgg > 1:156427‑M1/78‑112 (MQ=255) gTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAACATAATACTCGCCAGCAAAAATAAggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcaatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcacaac > 1:424739‑M1/1‑74 (MQ=255) ngctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTg < 1:272037‑M1/138‑1 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttcaTTACAAGAACGACGTAAACACCGCCCTCTTTCAGGTAAGTAAGACACCTTTTCTTATTTCACGCACTCATg < 1:62977‑M1/71‑1 (MQ=255) naaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAg < 1:359296‑M1/34‑1 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGTGTTGTTGTTTGTGTATCGACAATTCCGGAAACGATACCATTGCTCATGACCAGAATACGGTCTGTTATcc > 1:186477‑M1/57‑251 (MQ=255) aGTTCAACAGACTTAAAAATGTTGTGTCCTGGAAAATAATAATCGCCAGCAAAACTAAcgaaggtg < 1:346066‑M1/66‑9 (MQ=255) ctacaGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAggaaggtgcga > 1:247675‑M1/3‑54 (MQ=255) cccgcttattcgcaccttccCTAAACGCACGACGTAAATACCGCCCTCTTTCAGGTAAGTCAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAACGGTGCAAAGCCGCACGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGTATCGACAATTCCGGCACCGAGACCATTGCTCATGACCAGAATACGTTCTTTTATCCCTCACAACTCAGTCATTTCAGCGGAAataataata < 1:370328‑M1/230‑1 (MQ=255) cccgcttattcgcaccttccCTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGACAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTACAGGTGCAAAGACGCAAGACGCAGACTTTCGTTTTGCGTTGTTGTTTTTGTATCGAAAATTCCGGAAACGAGACCATTGCTCATGACCAGAATACGGTCTGTTATccc < 1:311562‑M1/196‑1 (MQ=255) aataatCGCCAGCAAAACTAAggaaggtgcgaacaagtacccgatatgagatcatgtttgtcatctcaagccacagaaacgggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcat > 1:394770‑M1/1‑21 (MQ=255) ccttccCTAAAAGAACGACGTAAATACCGCCATCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGGATCGACAATTCCGGAAACGAGACCATTGCTCATGACCAGAATACGGTCTGTTATcc > 1:409286‑M1/7‑201 (MQ=255) tAANAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTg < 2:272037/137‑1 (MQ=255) | ACACTTTGTTGGCGTTATCCATGGACTGCAATAATGTCGCAGCCACCACTGCCGCCAGCCCTACCTGACGACCAGCAGAAAGATCGGTCCCCTGGGTGACAATTAACCCTGCCACACCGAGCGCGATAATAATACGCACCGATGACTGGGTGAGAATATTACTTAAGTTCAACAGACTTAAAAATGTTGGGTCCTGGAAAATAATAATCGCCAGCAAAACTAAAAGAACGACGTAAATACCGCCCTCTTTCAGGTAAGTAAGAAAACTTTTCTTATTTAACGCACTCATGGGAAGCCCCTAATCTTAAAGGTGCAAAGACGCAAGACGCAGAATTTCGTTTTGCGTTGTTGTTTTTGTATCGACAATTCCGGAAACGAGACCATTGCTCATGACCAGAATACGGTCTGTTATCCCTAACAACTCAGGCATTTCAGAGGAGATAATAATA > NC_000913/2237465‑2237913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |