New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012971	= 3644070	103 (1.020)	7 (0.070)	7/580	7.4	6.8%	coding (2645/4851 nt)	ECD_RS18090	YadA‑like family protein
	?	NC_012971	3644368 =	90 (0.910)					coding (2943/4851 nt)	ECD_RS18090	YadA‑like family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAACAAATTATTATAACGTCGGCGATGCACTGGCTGCGATTAACTCCTCATTTAGCACGTCTCTCGGCGATGCTCTGCTTTGGGATGCCACCGCAGGTAAATTCAGTGCCAAACACGGTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012971/3643784‑3644070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacTTACACCATTGCGAACACCGAGTACAACAACGTCGGTGACGCCCTGGATGCGCTTGATGATAACGCCCTGCTGTGGGATGAGACTGCCAATGGCGGTGCTGGAGCCTACAATGCCAGCCATGACGGTAAAGCCAGCATCATCACTAATGTCGCTAATGG  >  NC_012971/3644368‑3644526                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAACAAATTATTATAACGTCGGCGATGCACTGGCTGCGATTAACTCCTCATTTAGCACGTCTCTCGGCGATGCTCTGCTTTGGGATGCCACCGCAGGTAAATTCAGTGCCAAACACGGTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCACCGACTTACACCATTGC                                                                                                                                                     >  2:519882/1‑299                                                                                                             GCCAAACACGGTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGTGGTGACGCAGAAGTCAACGCCGACGGCACCATCACCGCACCGACTTACAC                                                                                                                                                           >  1:454061/1‑185                                                                                                             GCCAAACACGGTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGTGGTGACGCAGAAGTCAACGCCGACGGCACCATCACCGCACCGACTTACAC                                                                                                                                                           <  2:454061/185‑1                                                                                                                       GTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCGCCGACTTACACCATTGCGAACACCGAGTACAACAACGTCGGTGACGACCTAGATGCGCTTGACGATAACACACCGCTGTGGGATGAGAATGCCAATGGCGGTGTTGGAGCCTACAATACCAGCCATGACGGTAAA                               >  2:141151/1‑299                                                                                                                                  GACGCAAGTGTGATCACTGATGTCGCGGATGGTGAAATTTCAGCTTCCAGTATTGACGCAGTGAACGGCTCACAACTCCATGACATGAGTAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCACCGACTTACACCATTGCGAACACCGAGTACAACAA                                                                                                                                   <  1:13729/188‑1                                                                                                                                  GACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGATGCCAGTGTTGACGCGGTGAACGGCTCACAACTCTATGGCGTGAGTAGGTATGTTGTTGATGCGCTGGGGGGTGGTGCAGAAGTCAATGCAGACGGCACCATCACTGCACCGACTTACACCATTGCGAACACCGAGTACAACAACGTCGGTGACGCCCTGGATG                                                                                                               <  1:519882/208‑1                                                                                                                                                   TGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCGCCGACTTACACCATTGCGAACACCGAGTACAACAACGTCGGTGACGCCCTGGATGCGCTTGATGATAACGCCCTGCTGTGGGATGAGACTGCCAATGGCGGTGCTGGAGCCTACAATGCCAGCCATGACGGTAAAGCCAGCATCATCACTAATGTCGCTAATGG  <  1:141151/300‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAACAAATTATTATAACGTCGGCGATGCACTGGCTGCGATTAACTCCTCATTTAGCACGTCTCTCGGCGATGCTCTGCTTTGGGATGCCACCGCAGGTAAATTCAGTGCCAAACACGGTACTAATGGTGACGCAAGCGTGATCACTGATGTCGCAGATGGTGAAATTTCAGACTCCAGTTCTGACGCAGTAAACGGCTCACAACTCCACGGCGTGAGCAGTTATGTTGTTGATGCGCTGGGGGGTGGTGCCGAAGTCAATGCAGACGGCACCATCACTGCGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012971/3643784‑3644070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacTTACACCATTGCGAACACCGAGTACAACAACGTCGGTGACGCCCTGGATGCGCTTGATGATAACGCCCTGCTGTGGGATGAGACTGCCAATGGCGGTGCTGGAGCCTACAATGCCAGCCATGACGGTAAAGCCAGCATCATCACTAATGTCGCTAATGG  >  NC_012971/3644368‑3644526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.