Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_000913	1,744,735	(ATT)2→1	coding (1279‑1281/1374 nt)	mdtK →	multidrug efflux pump MdtK

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1744733 =	1 (0.010)	50 (0.540)	36/588	1.1	99.0%	coding (1277/1374 nt)	mdtK	multidrug efflux pump MdtK
	?	NC_000913	= 1744729	0 (0.000)					coding (1273/1374 nt)	mdtK	multidrug efflux pump MdtK

ACCCTGACGGCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAA  >  NC_000913/1744435‑1745015                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                               aCCCTGACGGCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGTTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTNACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttatt                                                                                                                                                                                                                                                                                           >  2:560084/1‑300 (MQ=255)          gCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCTAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGTTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacg                                                                                                                                                                                                                                                                                  >  2:562774‑M2/1‑286 (MQ=255)                      gTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccatt                                                                                                                                                                                                                                                                      <  1:399661‑M2/300‑27 (MQ=255)                            cTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatg                                                                                                                                                                                                                                                                >  1:185423‑M2/1‑268 (MQ=255)                                     cAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgt                                                                                                                                                                                                                                                       >  1:755608‑M2/1‑259 (MQ=255)                                          gagacagttgtacaacgACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATNTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTNTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcg                                                                                                                                                                                                                                                  >  2:686527‑M2/7‑254 (MQ=255)                                              cTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGNTACGCGTTCCATTTTCTATATTACCTNTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagcaattatgatgatgttgcgtatgcggttc                                                                                                                                                                                                                                              <  2:499755‑M2/300‑51 (MQ=255)                                              cTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATANTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttc                                                                                                                                                                                                                                              <  1:514410‑M2/300‑51 (MQ=255)                                                gttgtACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATNCGCGTTCCATTTTCTATATTACCTTTGCGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTANATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttagtggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcct                                                                                                                                                                                                                                            <  2:602022‑M2/300‑53 (MQ=255)                                                gttgtACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAAGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGTGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTACTGGGCTTGCCACGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGAGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccatcatgatgatgttgcgtctgtggttcct                                                                                                                                                                                                                                            <  2:109096‑M2/300‑53 (MQ=255)                                                 ttgtACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcgctgtctc                                                                                                                                                                                                                                           <  1:702468‑M2/300‑54 (MQ=255)                                                               tCCCGAGGTTGTAACGCTGGCTGCGCATTTGATTTTGCTGGCGGCGGTATATCANATTTCTTACTCAATCCAGGTGATTGGCCGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtc                                                                                                                                                                                                                             >  2:542678‑M2/1‑233 (MQ=255)                                                                     ggTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCGGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccat                                                                                                                                                                                                                       <  2:357716‑M2/300‑74 (MQ=255)                                                                       ttGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcc                                                                                                                                                                                                                     <  2:148445‑M2/300‑76 (MQ=255)                                                                           aaCGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattct                                                                                                                                                                                                                 <  2:276955‑M2/300‑80 (MQ=255)                                                                               ctggctgCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaa                                                                                                                                                                                                             >  2:53350‑M2/1‑217 (MQ=255)                                                                                          tttGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccg                                                                                                                                                                                                  >  1:115016‑M2/1‑206 (MQ=255)                                                                                                     tGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagac                                                                                                                                                                                       >  2:420610‑M2/1‑195 (MQ=255)                                                                                                                tatCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaacc                                                                                                                                                                            >  1:121946‑M2/1‑184 (MQ=255)                                                                                                                       tttCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgg                                                                                                                                                                     <  1:727793‑M2/300‑124 (MQ=255)                                                                                                                                       ggTGATTGGCAGTGGGATTTTGCGTGGTTATNAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCNTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacaagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttt                                                                                                                                                     <  2:512076‑M2/300‑140 (MQ=255)                                                                                                                                       ggTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttt                                                                                                                                                     <  2:317646‑M2/300‑140 (MQ=255)                                                                                                                                                  gTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctcataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctg                                                                                                                                          <  2:159856‑M2/300‑151 (MQ=255)                                                                                                                                                      gATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagc                                                                                                                                      >  1:571177‑M2/1‑146 (MQ=255)                                                                                                                                                      gATTTTGCGTGGGTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagc                                                                                                                                      >  2:304816‑M2/1‑146 (MQ=255)                                                                                                                                                          ttGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACGGAACGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttg                                                                                                                                  >  2:147725‑M2/1‑142 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGTGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttaaagggttgcgcctgtatttttacgcaggctggagcgttgcgacaat                                                                                                                           <  2:231991‑M2/300‑166 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgntgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcaagggttgcgcctgtatttttacgcaggctggagcgttgcgccaat                                                                                                                           <  2:177698‑M2/300‑166 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgntgctgcgtatgcggttcctgcaacgtctgccgtcagccatcatcctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgtcgat                                                                                                                           <  2:179139‑M2/300‑166 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaat                                                                                                                           <  1:162514‑M2/300‑166 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgcagtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcaagggttgcgcctgtatttttacgcaggctggagcgttgcgccaat                                                                                                                           <  1:234841‑M2/300‑166 (MQ=255)                                                                                                                                                                 gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTAGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatccagctaataaagacaaggcgcaaccttcaagggttgcgcctgtatttttacgcaggctggagcgttgcgccaat                                                                                                                           <  2:237902‑M2/300‑166 (MQ=255)                                                                                                                                                                   tataAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcc                                                                                                                         >  1:478107‑M2/1‑133 (MQ=255)                                                                                                                                                                                       gctctAGATTACTTTGACGGCTTGATGGGTGCTGGGCTGGCCAAGCGGCTATATGCTGACACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaat                                                                                                     >  1:210146‑M2/3‑113 (MQ=255)                                                                                                                                                                                                          gCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagag                                                                                  <  1:713916‑M2/300‑207 (MQ=255)                                                                                                                                                                                                          gCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatccagctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagag                                                                                  <  1:713963‑M2/300‑207 (MQ=255)                                                                                                                                                                                                           cTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagt                                                                                 >  1:320744‑M2/1‑93 (MQ=255)                                                                                                                                                                                                                   gTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttaaacagagtttgccgac                                                                         <  2:114261‑M2/300‑216 (MQ=255)                                                                                                                                                                                                                                cAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttat                                                            >  1:486318‑M2/1‑72 (MQ=255)                                                                                                                                                                                                                                      gCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctcataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagaatttgccgaatggcatctgttatctcaac                                                      <  2:126212‑M2/300‑235 (MQ=255)                                                                                                                                                                                                                                            ttCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccntcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttncgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcatagcgttacacagagtttgccgactggcatctgttatctcaacgtgtat                                                <  2:598277‑M2/300‑241 (MQ=255)                                                                                                                                                                                                                                            ttCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtat                                                <  1:109013‑M2/300‑241 (MQ=255)                                                                                                                                                                                                                                                                         ccTCTGGGGCCAGCAGGCTTCTGGATAGGCTttattggcctgaagtcggcagccattatgatgatgttgcgtatgcggttcctgcaatgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaacttcacgggttgcgcctgcatntttacgcaggctggagcgttgcgccaatccagtcttcgtacggctgtagtttcagagcgttacacagagtttgcagactggtatctgttatctcaacgtgtatctccactgtaacttcccctttcccattga                   <  2:169433‑M2/300‑270 (MQ=255)                                                                                                                                                                                                                                                                                tgcCAGCAGGCTTCTGGATAGGCTgtattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaagncgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtcttgctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtatatccccggtaacttcccctttcacattgatgaagtc            >  2:185804‑M2/2‑24 (MQ=255)                                                                                                                                                                                                                                                                                ggCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtatatccccggtaacttcccctttcacattgatgaagtc            <  1:681733‑M2/300‑277 (MQ=255)                                                                                                                                                                                                                                                                                ggCCAGCAGGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtatatccccggtaacttcccctttcacattgatgaaggc            >  1:258674‑M2/1‑24 (MQ=255)                                                                                                                                                                                                                                                                                     gcagGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtatatccccggtaacttcccctttcacattgatgaagtcaggtg       <  1:344597‑M2/300‑282 (MQ=255)                                                                                                                                                                                                                                                                                     gcagGCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtatggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctccacgtgtatatccccggtaacttcccctttcacattgatgaagtcaggtg       <  1:686873‑M2/300‑282 (MQ=255)                                                                                                                                                                                                                                                                                        ggCTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgtggttcctgcaacgtctgccgtcagccatcattctgccacgagcatccagctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagcgcgttacacagagtttgccgactggcatccgttatctcaacgtgtatatcccaggtaacttcccctttcaacttgatgaagtaggatgaaa    <  2:221411‑M2/300‑285 (MQ=255)                                                                                                                                                                                                                                                                                          cTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctcaacgtgtatatccccggtaacttcccctttcacattgatgaagtcaggtgaaatt  <  1:183092‑M2/300‑287 (MQ=255)                                                                                                                                                                                                                                                                                          cTTCTGGATAGGCTttattggcctgacgtcggcagccattatgatgatgttgcgtatgcggttcctgcaacgtctgccgtcagccatcattctgcaacgagcatcccgctaataaagacaaggcgcaaccttcacgggttgcgcctgtatttttacgcaggctggagcgttgcgccaatcccgtcttcgtctggctgtaatttcagagcgttacacagagtttgccgactggcatctgttatctaaacgtgtatatccccggtaacttcccctttcacattgatgaagtcaggtgaaatt  <  2:195394‑M2/300‑287 (MQ=255)                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                               ACCCTGACGGCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAA  >  NC_000913/1744435‑1745015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.