Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_000913	1,744,735	(ATT)2→1	coding (1279‑1281/1374 nt)	mdtK →	multidrug efflux pump MdtK

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1744733 =	1 (0.010)	50 (0.540)	36/588	1.1	99.0%	coding (1277/1374 nt)	mdtK	multidrug efflux pump MdtK
	?	NC_000913	= 1744729	0 (0.000)					coding (1273/1374 nt)	mdtK	multidrug efflux pump MdtK

AATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1745018‑1744733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataaAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGC  <  NC_000913/1744729‑1744444                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTTAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAG                                                                                                                                                                                                                                                                                  <  2:195394/300‑1 AATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAG                                                                                                                                                                                                                                                                                  <  1:183092/300‑1   tttcatcctACTTCATCAAGTTGAAAGGGGAAGTTACCTGGGATATACACGTTGAGATAACGGATGCCAGTCGGCAAACTCTGTGTAACGCGCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCTGGATGCTCGTGGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCACATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCC                                                                                                                                                                                                                                                                                <  2:221411/291‑1      CACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGC                                                                                                                                                                                                                                                                             <  1:344597/300‑1      CACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTGGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCATACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGC                                                                                                                                                                                                                                                                             <  1:686873/300‑1           gcCTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCC                                                                                                                                                                                                                                                                        >  1:258674/3‑300           GACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCC                                                                                                                                                                                                                                                                        <  1:681733/300‑1           GACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCAAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGNCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATACAGCCTATCCAGAAGCCTGCTGGCa                                                                                                                                                                                                                                                                        >  2:185804/1‑299                  TCAATGGGAAAGGGGAAGTTACAGTGGAGATACACGTTGAGATAACAGATACCAGTCTGCAAACTCTGTGTAACGCTCTGAAACTACAGCCGTACGAAGACTGGATTGGCGCAACGCTCCAGCCTGCGTAAANATGCAGGCGCAACCCGTGAAGTTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACATTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACTTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCAGAGG                                                                                                                                                                                                                                                                 <  2:169433/300‑1                                               ATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAA                                                                                                                                                                                                                                    <  1:109013/300‑1                                               ATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTATGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGNAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGANGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAA                                                                                                                                                                                                                                    <  2:598277/300‑1                                                     GTTGAGATAACAGATGCCATTCGGCAAATTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATGAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGC                                                                                                                                                                                                                              <  2:126212/300‑1                                                           ATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTG                                                                                                                                                                                                                        >  1:486318/1‑300                                                                        GTCGGCAAACTCTGTTTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCAC                                                                                                                                                                                                           <  2:114261/300‑1                                                                                ACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAG                                                                                                                                                                                                   >  1:320744/1‑300                                                                                 CTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCTGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGC                                                                                                                                                                                                  <  1:713963/300‑1                                                                                 CTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGC                                                                                                                                                                                                  <  1:713916/300‑1                                                                                                    ATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGTCAGCATATAGCCGCTTGGCCAGCCCAGCACCCATCAAGCCGTCAAAGTAATCTAGAgc                                                                                                                                                                               >  1:210146/1‑298                                                                                                                        GGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATA                                                                                                                                                           >  1:478107/1‑300                                                                                                                          atcgaCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGGATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAGCANCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAAC                                                                                                                                                         <  2:179139/295‑1                                                                                                                          ATTGTCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCTTTAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACACGTATCTTTATAAC                                                                                                                                                         <  2:231991/300‑1                                                                                                                          ATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCTTGAAGGTTGCGCCTTGTCTTTATTAGCTGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACTACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAAC                                                                                                                                                         <  2:237902/300‑1                                                                                                                          ATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCTTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACTGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAAC                                                                                                                                                         <  1:234841/300‑1                                                                                                                          ATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCTTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACANCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAAC                                                                                                                                                         <  2:177698/300‑1                                                                                                                          ATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAAC                                                                                                                                                         <  1:162514/300‑1                                                                                                                                 CAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGTTCCGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAA                                                                                                                                                  >  2:147725/1‑300                                                                                                                                     GCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATACCCACGCAAAATC                                                                                                                                              >  2:304816/1‑300                                                                                                                                     GCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATC                                                                                                                                              >  1:571177/1‑300                                                                                                                                         CAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATGAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCAC                                                                                                                                          <  2:159856/300‑1                                                                                                                                                    AAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTTGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAANGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTNATAACCACGCAAAATCCCACTGCCAATCACC                                                                                                                               <  2:512076/300‑1                                                                                                                                                    AAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACC                                                                                                                               <  2:317646/300‑1                                                                                                                                                                    CCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAA                                                                                                               <  1:727793/300‑1                                                                                                                                                                           GGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATA                                                                                                        >  1:121946/1‑300                                                                                                                                                                                      GTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCA                                                                                             >  2:420610/1‑300                                                                                                                                                                                                 CGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAA                                                                                  >  1:115016/1‑300                                                                                                                                                                                                            TTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAG                                                                       >  2:53350/1‑300                                                                                                                                                                                                                AGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTT                                                                   <  2:276955/300‑1                                                                                                                                                                                                                    gGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAA                                                               <  2:148445/299‑1                                                                                                                                                                                                                      ATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCCGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACC                                                             <  2:357716/300‑1                                                                                                                                                                                                                            GACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACGGCCAATCACCTGGATTGAGTAAGAAATNTGATATACCGCCGCCAGCAAAATCAAATGCGCAGCCAGCGTTACAACCTCGGGA                                                       >  2:542678/1‑300                                                                                                                                                                                                                                          gagacagCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAA                                         <  1:702468/293‑1                                                                                                                                                                                                                                           AGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCACTAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATNTAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGCAAAGGTAATATAGAAAATGGAACGCGNATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAAC                                        <  2:602022/300‑1                                                                                                                                                                                                                                           AGGAACCACAGACGCAACATCATCATGATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCTCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCGTGGCAAGCCCAGTACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACACGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACTTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAAC                                        <  2:109096/300‑1                                                                                                                                                                                                                                             GAACCGCATACGCAACATCATCATAATTGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTANAGGTAATATAGAAAATGGAACGCGTANCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAG                                      <  2:499755/300‑1                                                                                                                                                                                                                                             GAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGANTATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAG                                      <  1:514410/300‑1                                                                                                                                                                                                                                                 CGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCANAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAANATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACtgtctc                                  >  2:686527/1‑294                                                                                                                                                                                                                                                      ACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTG                             >  1:755608/1‑300                                                                                                                                                                                                                                                               CATCATAATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAG                    >  1:185423/1‑300                                                                                                                                                                                                                                                                     AATGGCTGCCGACGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAAC              <  1:399661/300‑1                                                                                                                                                                                                                                                                                 CGTCAGGCCAATAAAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCAACTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTAGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGC  >  2:562774/1‑300                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAAAAATACAGGCGCAACCCGTGAAGGTTGCGCCTTGTCTTTATTAGCGGGATGCTCGTTGCAGAATGATGGCTGACGGCAGACGTTGCAGGAACCGCATACGCAACATCATCATAATGGCTGCCGACGTCAGGCCAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1745018‑1744733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataaAGCCTATCCAGAAGCCTGCTGGCCCCATAGGTTCAACGACCAGATCGGTCAGTGCCAGAATATAGCCGCTTGGCAAGCCCAGCACCCAGTAAGCCGTAAAGGTAATATAGAAAATGGAACGCGTATCTTTATAACCACGCAAAATCCCACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGC  <  NC_000913/1744729‑1744444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.