| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,640,418 | IS30 (–) +2 bp | coding (17‑18/141 nt) | yjjY → | uncharacterized protein YjjY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 271761 | NA (NA) | 19 (1.000) | 18/272 | 0.1 | 100% | noncoding (1221/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 4640419 | 0 (0.000) | coding (18/141 nt) | yjjY | uncharacterized protein YjjY | |||||
| * | ? | NC_000913 | = 4508679 | NA (NA) | 19 (0.990) | 15/276 | 0.1 | 100% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 4640418 = | 0 (0.000) | coding (17/141 nt) | yjjY | uncharacterized protein YjjY | |||||
GATCTGATGCATTTCCGCGCCATCTGTCGCTTCGAAAACATCATAGCCTTCCGCTTCGAAAATACTTTTCAACGTGTTGCGTGTTACCAACTCGTCTTCAACGATAAGAATGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACA > NC_000913/4640181‑4640661 | ngtgagctacagcccgcttacgctcatggggttttatgccgccagtatcccttaacatagtgaagatcgttccgggttttgaacccaggctattagctctttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataacttttacgttgaccaattgaatctacaATTGCGTTCTTGAt > 1:101021‑M2/238‑251 (MQ=255) gtgagctacagcccgcttacgctcatggggttttatgccgccagtatcccttaacatagtgaagatcgttccgggttttgaacccaggatattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATg < 1:174028‑M2/15‑1 (MQ=255) gcttacgctcatggggttttatgccgccagtatcccttaccatagtgaagatcgttccgggttttgaacccaggctattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAAc > 1:354009‑M2/223‑251 (MQ=255) gcCATCTGTCGCTTCGAAAACATCATAGCCTTCCGCTTCGAAAATACTTTTCAACGTGTTGCGTGTTACCAACTCGTCTTCAACGATAAGAATGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccc < 1:174558‑M2/251‑31 (MQ=255) cgccagtatcccttaacatagtgaagatcgttccgggttttgaacccaggatattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTc > 1:357055‑M2/199‑251 (MQ=255) gCCTTCCGCTTCGAAAATACTTTTCAACGTGTTGCGTGTTACCAACTCGTCTTCAACGATAAGACTGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCTCCTACATCGAATCAGGTAGTACCATAGTCCATGACCTGCCTGCTGCTTTCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcacttatctctttcggtgttttgt < 1:508678‑M2/251‑58 (MQ=255) agtgaagatcgttccgggttttgaacccaggatattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCatn < 1:308712‑M2/26‑2 (MQ=255) tgaagatcgttccgggttttgaacccaggatattcgctatttcactgaaacctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccaggttttctcataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGctn < 1:53298‑M2/49‑2 (MQ=255) naacGTGTTGCGTGTTACCAACTCGTCTTCAACGATAAGAATGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCAACTACATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtc < 1:93735‑M2/237‑69 (MQ=255) ttttgaacccaggatattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaattttcgtctcattcaaaaaacctccgcaaccccatgtttgcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATg < 1:326326‑M2/15‑1 (MQ=255) acccaggatattcgctatttcactgaagcctgttccgttcttccatagttcaaaaacagaggcattttcctctgctgtaaatgttcggctcattcaaaaaacctccgcaaccccatgttttcacataactggtgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTgg < 1:507482‑M2/57‑1 (MQ=255) nntannnnnctgnagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgtgcgtcacattcaaaaaacctccgcaaccccatgtgttcacataactgttgcgttgaccaagtgaatctacaATTg < 2:304489‑M2/4‑1 (MQ=255) tcactgaagcctgttccgttcttccatagttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTcc < 1:237564‑M2/66‑1 (MQ=255) aaGAATGTGCGGGGTCTGCATGTTTGCTTCCTAAATTGCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagagtcaatttgtcaatgcaacacccctttcaattatctctttcggggttttgaacttcagtgtctttctcgggctgttgtttagctgagcagcaaccagatctagttcatgtt > 1:80828‑M2/1‑134 (MQ=255) aGAATGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaac > 1:469379‑M2/1‑133 (MQ=255) gttcaaaaacagaggctttttcctctgctgtaaatgttcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTTACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCgg < 1:500606‑M2/143‑1 (MQ=255) aggctttttcctctgctgtaaatgttcgtcacattcacaaaacctccgaaaccccatgttttaacataactgttgcgttgaccaattgcatctacaCTTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACa > 1:256470‑M2/97‑212 (MQ=255) gCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCATCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaagtatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctga > 1:485570‑M2/1‑97 (MQ=255) gctttttcctctgctgtaaatgatcgtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTATTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATaaaa > 1:121060‑M2/95‑250 (MQ=255) gAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAAAATGATCGGCGTAACATGAATAAAGTACGTACTtgtagattcaatatgtcaatgcaaaacccctttcacttctctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctg < 1:336808‑M2/176‑92 (MQ=255) tACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgtt > 1:144552‑M2/1‑74 (MQ=255) cAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctg > 1:400633‑M2/1‑72 (MQ=255) gtctcnntcnnnaannctccgcaaccccctgttttcacanaactgttgcgttgaccaattgaatctacaNTNGNGTTCNNGATNCACTTTCCATNAACGTCAACAACATCATTAGCTTGGTCGTg > 2:376440‑M2/70‑125 (MQ=255) gtctcattcaaaaaacctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTg < 1:376440‑M2/56‑1 (MQ=255) gTCCCTGACCTGCCTGATGCAAGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaaccag > 1:488491‑M2/1‑67 (MQ=255) cntgcctgATGCATGATGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtg < 1:395272‑M2/125‑67 (MQ=255) tgcctgATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctt > 1:152754‑M2/1‑57 (MQ=255) cctccgcaaccccatgttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACgg > 1:26550‑M2/55‑147 (MQ=255) nnaaattANNATGATCGGCGTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttg > 2:13320‑M2/3‑42 (MQ=255) gttttcacataactgttgcgttgaccaattgaatctacaATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACGTTCCCTCAGGACCCGACAGTGTCAAAATCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtgatga < 1:243534‑M2/211‑1 (MQ=255) gTAACATGACTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccct > 1:335727‑M2/1‑23 (MQ=255) aCTAAAGTACGTAATtgtagattcaatctgtcaatgcaatacccctttcaattatctcattcggtgttttgaacttcagtgtctttctcggactgttgtttagctgagcacaaaccagatctagttcatgttgagt < 1:75555‑M2/136‑122 (MQ=255) cTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaaccagatctagttcatgttgagtatattgggcaagacatgtctttttaggaaag < 1:460644‑M2/166‑153 (MQ=255) cTAAAGTACGTAATtgtagattcaatctgtcaatgcaacacccctgtcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaaccagatctagttcatgttgagtatattgggcaagacatgtctttttaggaaagtactgcc > 1:88181‑M2/1‑14 (MQ=255) gtggattcaATTGCGTTCTGGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGGACTTTCCCTCAGGACCCTACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCg < 1:502485‑M2/142‑1 (MQ=255) gTACGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaaccagatctagttcatgttgagtatattgggcaagacatgtctttttaggaaagtactgccgaattagcccatttgtattctcatttgttccccgctgccaaggactctgaggatcgcagaagtaaactttaacgccggtgctg < 1:437853‑M2/251‑243 (MQ=255) cGTAATtgtagattcaatctgtcaatgcaacacccctttcaattatctctttcggtgttttgaacttcagtgtctttctcggtctgttgtttagctgagcagcaaccaga < 1:34456‑M2/110‑105 (MQ=255) acaATTNNGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACgg < 2:26550‑M2/93‑1 (MQ=255) | GATCTGATGCATTTCCGCGCCATCTGTCGCTTCGAAAACATCATAGCCTTCCGCTTCGAAAATACTTTTCAACGTGTTGCGTGTTACCAACTCGTCTTCAACGATAAGAATGTGCGGGGTCTGCATGTTTGCTACCTAAATTGCCAACTAAATCGAAACAGGAAGTACAAAAGTCCCTGACCTGCCTGATGCATGCTGCAAATTAACATGATCGGCGTAACATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACA > NC_000913/4640181‑4640661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |