Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | NC_000913 | 4,640,418 | IS30 (–) +2 bp | coding (17‑18/141 nt) | yjjY → | uncharacterized protein YjjY |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 271761 | NA (NA) | 19 (1.000) | 18/272 | 0.1 | 100% | noncoding (1221/1221 nt) | IS30 | repeat region |
? | NC_000913 | = 4640419 | 0 (0.000) | coding (18/141 nt) | yjjY | uncharacterized protein YjjY | |||||
* | ? | NC_000913 | = 4508679 | NA (NA) | 19 (0.990) | 15/276 | 0.1 | 100% | noncoding (1/1221 nt) | IS30 | repeat region |
? | NC_000913 | 4640418 = | 0 (0.000) | coding (17/141 nt) | yjjY | uncharacterized protein YjjY |
CAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGC > NC_000913/271520‑271987 | cAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtac < 1:437853‑M1/251‑10 (MQ=255) cccGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTTCAACCGCGCTCTTNa < 1:395460/250‑1 (MQ=25) tACTTCTGCGATCCTCAGAGTTCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATAGACTCAACATGAACTACATCTGGTTGCTGCTCAGCTAAACAACATACCGAGAAAGACGCTGAATTGCAAAACACCGAAAGAGATAATTGAAAGGTGTGTTGCATTGACAGATTGAATCTACATGCGCGCTCTTGATGTCAGGCTCCCTg < 1:386861/250‑1 (MQ=11) cTTCTGCGATCCTCAGAGTAATTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCACAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAAc > 1:178019/1‑251 (MQ=255) cGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTtct > 1:37280/1‑251 (MQ=255) gTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCggg < 1:27840/251‑1 (MQ=255) naaCAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACCTGAACTAGATCTGGTTGCTGCTCAGCTAAACACCAGACCGAGAACGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACcg > 1:63354/2‑193 (MQ=255) cAAATGGGCTAATTCGGCAGTACTTTCCTACAAAGCCATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAACGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCtgtg > 1:418924/1‑245 (MQ=255) ggCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGACAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttag > 1:88181‑M1/1‑159 (MQ=255) ncAGTACTTTCCTAAAAAGACATGTCTTGCCCACTATACTCAACATGAACTAGATCTGGTTGCTGCTCCGCTAAACAACAGACCGAGAAAGACCCTGAAGTTCAAAACACCGAAAGAGATATTTAAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAggg > 1:55326/2‑215 (MQ=255) ntttCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGt > 1:149796/2‑168 (MQ=255) cTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttag < 1:460644‑M1/166‑15 (MQ=255) naaaaGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGc > 1:312120/2‑218 (MQ=255) tGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACt > 1:24444/1‑251 (MQ=255) aCTCAACATGAACTAGATCTGGTTTGTGCTCAGCTAAACAACAGTCCGAGAAAGACACTGAAGTTCAAAACACCGAATGAGATAATTGAAAGGGGTATTGCATTGACAGATTGAATCTACAattacgtactttagt < 1:75555‑M1/136‑16 (MQ=255) cAACATTAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTTCAGCCGCGCTCTTGATGTCAGACTCCCTGAAGAGTTCTGGATAATGGGGAATCTCAGGGCGCTTTATCCTTTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTcc < 1:333246/251‑1 (MQ=25) aaCATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGCCCGAGAAAGACACTGAAGTTCAAAACCCCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAAATTGACTCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttgtacttcctgtttcgatttagttggcaatttaggaagcaaacatgcagaccccgcacattctt > 1:80828‑M1/1‑117 (MQ=255) naTCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAACACACTGAAGTTAAAAACACCGAAAGAGATAATTGACAGGGGTGTTGCATTGACAGATTGAATCTACaa > 1:99215/2‑107 (MQ=11) tCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacg < 1:34456‑M1/110‑7 (MQ=255) cTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcttgcatcaggcaggtcagggac > 1:488491‑M1/1‑103 (MQ=255) nttGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAACGAGCTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGCTGTCAg > 1:63722/2‑119 (MQ=14) gTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttgtacttcctgtttcgatttagttggcaatttaggtagcaaacatgcagaccccgcacattct > 1:469379‑M1/1‑100 (MQ=255) tgctCAGCNANNNANNAGACCGAGAACGACACTGACGTTCAAAACACCGACCGAGATAATNGCACGGGGTGTTGCANTGNCAGANTGANTCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAGCTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGATCNTCGnggcagnncnacaaacnnna > 2:363240/1‑204 (MQ=25) ctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCt > 1:426613/1‑251 (MQ=255) tCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATACTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggatggtcagggacttttgtacttcctgtttcgatttagttggc > 1:485570‑M1/1‑92 (MQ=255) cAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGAGAAGTGAAAGGGGTTTTGCATTGACATATTGAATCTACAagtacgtactttattcatgttacgccgatcattttaatttgcagcatgcatcaggcaggtcagggacttttgtacttcctgtttc < 1:336808‑M1/176‑86 (MQ=255) gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAACGGGGTGTTGCATTGACAGCTTGAATCTACAACCGCGCTCTTGATGTCCGACTCCCTGAACAGTTCTCGa > 1:212629/1‑128 (MQ=255) aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttgta > 1:144552‑M1/1‑82 (MQ=255) nnnnnnnnnnaanNNNNCTGNAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGc < 2:312120/144‑1 (MQ=37) caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttg > 1:400633‑M1/1‑80 (MQ=255) aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCGGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGCAGTCAgg < 1:450364/251‑1 (MQ=255) ccGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCTCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATc > 1:340942/1‑178 (MQ=255) atgagaAAGACAATGAAGATCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCACTTGATGTCAGACTCCCGGAACAGTACTCGATAATCGGGAAACTAAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGatcatc > 1:340952/3‑178 (MQ=25) gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttgtacttcctgtttcgatgtagttggcaatttaggtagcaaacatgcagaccccgcacattcttatcgttgaagacgagttggtaacacgcaacacgttn < 1:93735‑M1/238‑171 (MQ=255) cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcatcatgcatcaggcang < 1:395272‑M1/125‑60 (MQ=255) gTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAAACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGAGGCCACTCTCTGCCATGTGTTCGTGGTTCATCGCAGCAGCTACAAATTCTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGc < 1:485766/226‑1 (MQ=255) acaAAACACCGAAAGAGATAAGTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagaaagcagcaggcaggtcatggactatggtactacctgattcgatgtaggaggcaatttaggtagcaaacatgcagaccccgcacagtcttatcgttgaagacgagttggtaacacgcaacacgttgaaaagtattttcgaagcggaaggc < 1:508678‑M1/250‑195 (MQ=255) cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatnntaatttnn > 2:13320‑M1/1‑56 (MQ=255) aaaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCATACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCan < 1:300285/251‑2 (MQ=255) aaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggca > 1:152754‑M1/1‑45 (MQ=255) tAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAACGCGCTCTTGATGTAAGAATCCCTGAACAGTTCTCGATACTCGGGAAACTCAGGGCGCGTTATCCtgtg > 1:281630/1‑110 (MQ=37) aGGGGTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttac > 1:335727‑M1/1‑31 (MQ=255) ggggTGTTGCATTGACAGATTGAATCTACAattacgtactttagtcatgttacgccgatcatgttaatttgcagcatgcatcaggcaggtcagggacttttgtacttcctgtttcgatttagttggcaatttaggtagcaaacatgcagaccccgcacattcttatcgttgaagacgagttggtaacacgcaacacgttgaaaagtattttcgaagcggaaggctatgatgttttcgaagcgacagatggc < 1:174558‑M1/251‑222 (MQ=255) gtgtTGCAGTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCGGAACAGTTCTCTATAATCGGGAAACTCAGGGCGCGTGATCCTGTGGCCACCCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCTTCCTGAAAAGCCAGACGGCATACGTGCTTTAGTACGCAGTCATGTACTTGAACTGCATGGCATCAGCCACGGTTCTGCCGGAGCAATAAGCATc < 1:454386/251‑1 (MQ=255) gtTGCATTGACAGATTGAATCTACAACCGCGCGCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGGTATCCTGTTGCCAGTCTCTGCCATGTGTTCGGGGTGCATCGCAGCAGGTACAAATACGGGAAAGACCGTCCTGAAAAGCCAGACGGCGGACGGGCTTTATGGCTCAGTCCGGGACGTGAACTGCCTGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGc < 1:363240/251‑1 (MQ=255) gCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAAAAGTTCTCGATAATCgggc > 1:491316/1‑69 (MQ=255) | CAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGC > NC_000913/271520‑271987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |