| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,536,236 | IS5 (+) +4 bp | intergenic (‑2183/‑358) | topAI ← / → ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 11 (1.110) | 8/320 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4536236 = | 0 (0.000) | intergenic (‑2183/‑361) | topAI/ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 4 (0.400) | 4/322 | 0.5 | 79.6% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4536239 | 1 (0.100) | intergenic (‑2186/‑358) | topAI/ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB | |||||
CTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGC > NC_000913/4536026‑4536442 | cTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTGTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAAggaaggtgcgaacaagtccctgatatgagatca > 1:207837‑M2/1‑214 (MQ=255) caacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactagggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttactggagaaaaaatcggctcaaacatgaacaaattaaattactgagtcagccgagaagaatttcctcgcgtatgcgcgccttccCTAATTTCTTTGAACATCATTATGCATATCATCATCGTCTATTTGCCAGAATc < 1:82388‑M2/53‑1 (MQ=255) nagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccagcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATc > 1:24597‑M2/168‑251 (MQ=255) ntgggagagatctcactaaaaactggggataacgccttaaatggcgaagacacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGAc > 1:44682‑M2/166‑225 (MQ=255) aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAAc < 1:189780‑M2/101‑1 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGtt > 1:46633‑M2/133‑251 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGtt < 1:173129‑M2/140‑1 (MQ=255) ttCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctcgtcccgcatgtagcagattctgc > 1:74081‑M2/1‑85 (MQ=255) ngagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGgc > 1:25061‑M2/82‑251 (MQ=255) gaaaaactcggatcaaacctgaagaaatgaaatgactgagtcagccgagaagaatttccccgattattagaaccttccCTAATTTCTTTGAACATCATTCAGCATATCATCATCGTCTATTTACCAGAATCCGTCGACTTATAATCGCCAGAACGGCata > 1:29867‑M2/79‑160 (MQ=255) cTTTTAGGAATGAAAGAAAATGCCAGCAATAATATAATAATGGCCTAAggaaggtgcgaacaagtccctgatatgagataatgtttgtnntctggannc < 2:1453‑M2/99‑52 (MQ=255) cTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatataacagggttcatcatgagtcatcaacttacctgcgccgacagtgaattc > 1:1453‑M2/1‑48 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTACTTTGAACATCATTCAGCATATCCTCATCATCTATTTGACAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGc > 1:214960‑M2/44‑250 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGATAATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTCTAATc > 1:158695‑M2/37‑104 (MQ=255) ccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATCTCATCATCGTCTATTTGCCAGCATCCGTCGACTTATAATCGccagcac > 1:78428‑M2/22‑94 (MQ=255) nctncccNANNTNNTTTNAACATCATTAAGCATATAATCNNCGTCTATTTNCCAGAATCCTTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGNACGCTGTGGNNAANAACTGNCNNNANNNCTNTGTAGATGTTCGTGGATTTNCGNNCCATAANCGAAAAGGCGCGGATGTCTATTAAgg < 2:46633/188‑1 (MQ=255) | CTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGC > NC_000913/4536026‑4536442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |