Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,536,236 IS5 (+) +4 bp intergenic (‑2183/‑358) topAI ← / → ythB toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)11 (1.110) 8/320 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 4536236 = 0 (0.000)intergenic (‑2183/‑361) topAI/ythB toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB
* ? NC_000913 = 2290113NA (NA)4 (0.400) 4/322 0.5 79.6% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 4536239 1 (0.100)intergenic (‑2186/‑358) topAI/ythB toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB

GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTTGTTTTTCTTGATGAGAAGCTGATGCAAA  >  NC_000913/2290019‑2290341
                                                                                              |                                                                                                                                                                                                                                    
gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAATCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAACTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAgn                                                                                                                 <  1:129745/212‑2 (MQ=255)
gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGANAAANNNNNAcnnnnnnnnnn                                                                                                                                                                           >  2:129745/1‑144 (MQ=18)
                 gatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATTATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGATCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCTAAGTCAGTTTTTAAAAACTGTTTAAAGAAAtn                                                          <  1:24615/250‑2 (MQ=255)
                                     gTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCATAACGCTGTAGCCACCAGAACAGATATTTCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACATAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAATAAATGCACAAGTATTGtgattgat                                       <  1:65569/249‑1 (MQ=255)
                                                ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCATACTCATGCATTGAGCTTTCATCATATGAAATTAATTGCTGTTAAAAGCATTGGTTACAGAAAAGACCCATAGCTCCATACCCGGAGTCAGTTTTTAAACACTGTTTAAAGAAATGCACAAGTATTGTGATTGAGTTTTTAGTTGttt                          <  1:212381/251‑1 (MQ=255)
                                                                      tatCAGNGNCNTNTTCGCACCTTCCATAANGCTTTAGcc                                                                                                                                                                                                                        >  2:204753/1‑39 (MQ=21)
                                                                      tatCAGGGACTTGTTCGCACCTTCCATAACGCTGTAgac                                                                                                                                                                                                                        <  1:204753/39‑3 (MQ=255)
                                                                         cAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGCACAGATATTGCGGAACGACCAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATCCCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTTGTTTTTCTTGATGAGAAGCTGATGCaaa  >  1:118206/1‑250 (MQ=255)
                                                                                        aCCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTAATCCTATGAACTTAATTGCTGTTAAAAGCATTGGGTACAGAAACTACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAAc                                                                        >  1:164514/1‑165 (MQ=255)
                                                                                        aCCTTCCATAACGCGGTAGNCNCCAGAACAGATATGGCGGAACGACAAAGAGAAACAGAACCAGATTGATNCATTGAGCTTNCATNNTATGNANTNAATTGCTGTTAAAAGCATTGGGTACAGAANATACCCATAGCTCCATACCCGGANNCANNNTGNNAAAAc                                                                        <  2:164514/165‑1 (MQ=255)
                                                                                              |                                                                                                                                                                                                                                    
GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTTGTTTTTCTTGATGAGAAGCTGATGCAAA  >  NC_000913/2290019‑2290341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.