| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,135,180 | IS2 (–) +5 bp | coding (1346‑1350/2181 nt) | katG → | catalase/hydroperoxidase HPI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135180 = | 1 (0.070) | 17 (1.200) | 14/310 | 0.1 | 94.3% | coding (1346/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4135184 | 1 (0.070) | 14 (0.990) | 12/310 | 0.1 | 93.1% | coding (1350/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
CCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTG > NC_000913/4134945‑4135427 | gagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGa < 1:244886‑M1/15‑1 (MQ=255) ggTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTAGTTTCATCAACGATCTGCAGGCGTTAAACGAAGCCTTTGCCCGTGACTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATATGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttcc > 1:229275‑M1/1‑229 (MQ=255) nctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaaccattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactcgtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGc < 1:95121‑M1/28‑1 (MQ=255) cGTTTTGCTCCTGAGTTAGAGAAGATCTCTCGTCGTTTCCTCACCGATCCGCAGGCGGTAAACGAAGCCTTTGCCCGTGCCTGGGTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGACGTGCCGAAAGAAGATCTGATCTGGCAAGATACGCTGCCTCAGCCGATCTACAACCCGCCCGAGCAGGAAATTtggatttgcccctatatttccatacatctgttatcactta > 1:250121‑M1/1‑210 (MQ=255) gggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGAGCTGAAATGCGCGATTGCGGATTCTGGTCTGTCTTTTAGTg > 1:111668‑M1/201‑251 (MQ=255) cgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttctcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGAt < 1:186659‑M1/32‑1 (MQ=255) gAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaag < 1:8908‑M1/250‑53 (MQ=255) ngagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAc < 1:196853‑M1/2‑1 (MQ=255) gtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGcc < 1:16479‑M1/68‑1 (MQ=255) caaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactcgtctaaaaactcgtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCtt < 1:227007‑M1/81‑1 (MQ=255) gaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACATTCCgtg < 1:102584‑M1/93‑1 (MQ=255) cGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTTCATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGTCCGAGCAGGACATTATCGATCTGTAAGTCGCGATTGCGGAGTCTGGTCTGTCTGTTAGTGAGCTGGTAGCGGTGGCCTGGGCATCTGCTTCTAcc < 1:275707/236‑1 (MQ=255) nnnnnnttnnnnngtgntacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgcagattcagggggccagtctaAc > 2:196853‑M1/149‑150 (MQ=255) nnnnnngcnnnnnCCTNGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatt < 2:196023‑M1/144‑7 (MQ=255) gCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataan < 1:78177‑M1/220‑89 (MQ=255) aaCTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCTGAAGTGTCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtgtatttttccctatatttccatgcagctgttatcacttaacccattacaatcccgctgccgcagatgttcccgtgtcgagcgatagcccatcgcactatgcggatgccattcgttataatgctcgaac < 1:158849‑M1/251‑130 (MQ=255) ccGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACACCCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggctgccattcgttataatgctcgaacgcctctgcaaggttctttgctgc > 1:243124‑M1/1‑99 (MQ=255) caatgactagtctaaaaactagtattaagaatatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATAGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGCGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGc < 1:120641‑M1/115‑1 (MQ=255) tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAACATCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGACATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGCGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCg < 1:312402‑M1/178‑1 (MQ=255) ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGAGTCTGGTCTGTCTGGTAGTGAGCTGGTATCGGtgn > 1:95783‑M1/73‑137 (MQ=255) gCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc > 1:19064‑M1/1‑70 (MQ=255) ccGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTgggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcanat > 2:192368‑M1/1‑69 (MQ=255) nnnnnnnnntnttnnagggntattggttgtctggagattcagggngccagtctaACATTATCGAGCTGAAATTCGCNANTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCNTCTGCTTCTANCTGNNGTGGNGNCNACAAACGCGGTGGGGCCAACGGTGCGCGTNTGGCATTAATGCCGCAGCGCGACNNGGNNNTGNNcgccg > 2:244886‑M1/55‑222 (MQ=255) gatctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCAGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacacattacaagcccgctgccgcagatattcacgtggcgagc > 1:139790‑M1/1‑55 (MQ=255) tCCGCTGCCGCATCCGATCTACAACCCGACCGAGCAGGACATTtggatttgaacctatatttcccgacatatgttatcacttaccccattacaagcccgctgccgcagatattcccgtgtcgagcgataacccagagcactatgc > 1:222973‑M1/1‑43 (MQ=255) tCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctntatntccanacntctgttatcacttaanccattacaagcccgctgccgcagatattcccgtggcgagcgatanncnnncncactatgc < 2:222973‑M1/145‑103 (MQ=255) ccGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACCTTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgacattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcac > 1:127227‑M1/1‑42 (MQ=255) gagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCCTTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTGCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTg < 1:23869‑M1/230‑1 (MQ=255) cccGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttan < 1:195022‑M1/251‑233 (MQ=255) gccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCAt < 1:8365‑M1/241‑1 (MQ=255) ccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGCCAAACGCGGTGGTGCCAAc < 1:321894‑M1/119‑1 (MQ=255) ctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAAAGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATTTCATAGTGCTg < 1:46752‑M1/248‑1 (MQ=255) | CCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTG > NC_000913/4134945‑4135427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |