| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,135,180 | IS2 (–) +5 bp | coding (1346‑1350/2181 nt) | katG → | catalase/hydroperoxidase HPI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135180 = | 1 (0.070) | 17 (1.200) | 14/310 | 0.1 | 94.3% | coding (1346/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4135184 | 1 (0.070) | 14 (0.990) | 12/310 | 0.1 | 93.1% | coding (1350/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
CAGCACTATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4135427‑4135180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTC > NC_000913/4498181‑4498415 CAGCACTATGAAATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCTTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAG < 1:46752/251‑1 ATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGC < 1:8365/250‑1 CAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGCACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAAGGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTC < 1:23869/251‑1 CGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCGCCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGTCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGATGTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGA < 1:312402/251‑1 CGGCGNNCANNNCCNNGTCGCGCTGCGGCATTAATGCCANACGCGCACCGTTGGCCCCACCGCGTTTGTNGNCNCCACNNCAGNTAGAAGCAGANGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCANTNGCGAATTTCAGCTCGATAATGTTAGACTGGCNCCCTGAATCTCCAGACAACCAATANCCCTNNAANAnnnnnnnnn > 2:244886/1‑213 GTTGGCACCACCGCGTTTGGCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGG < 1:321894/127‑1 GCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCGCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCTATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATATTCTTAATACTAGTTTTTAGACTAGTCATTG < 1:120641/198‑1 CACGGAATGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTC < 1:102584/251‑1 AAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACGAGTTTTTAGACGAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTG < 1:227007/251‑1 GGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGAC < 1:16479/251‑1 nCACCGATACCAGCTCACTACCAGACAGACCAGACTCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAG > 1:95783/2‑138 CACTAAAAGACAGACCAGAATCCGCAATCGCGCATTTCAGCTCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCC > 1:111668/1‑251 ATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAGAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCG < 1:186659/226‑1 GCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACGAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATGGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGn < 1:95121/251‑2 TCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTC < 1:244886/250‑1 GTTAGACTGGCCCCCTGAATCTGCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTANCACNNNNNAAnnnnnn > 2:196853/1‑144 GTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCn < 1:196853/192‑2 CAGCACTATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4135427‑4135180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTC > NC_000913/4498181‑4498415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |