| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,135,180 | IS2 (–) +5 bp | coding (1346‑1350/2181 nt) | katG → | catalase/hydroperoxidase HPI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135180 = | 0 (0.000) | 12 (1.250) | 11/314 | 0.0 | 100% | coding (1346/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4135184 | 0 (0.000) | 10 (1.050) | 8/314 | 0.1 | 100% | coding (1350/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
TGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGA > NC_000913/4134952‑4135375 | aactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttgtcctgggtggtacgccgtcggcggttctccggccctaagacatcaatcatctgttcgccaatgacgagtcgaaaaactagtattaagacgatcacttatgtaagtgatattggttgtctggagattcagggggccaggctaACATGAGCGATCTGAAATtcgg > 1:166336‑M1/229‑249 (MQ=255) aagaTCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGTTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGATCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg < 1:35904‑M1/251‑63 (MQ=255) gttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttatgtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCt > 1:160911‑M1/174‑250 (MQ=255) ctctgctgaaccattgcgatcttttcatgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGc < 1:172498‑M1/73‑1 (MQ=255) acaattgcgatcttttcctgtgtggtacgccgtctgcgtttcgccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactagcacttatttaagtgatattggttgtctggagagtcaggtggccagtctaACATTATCGATCTAAAATTCGTGATTTCGCATTCTCGTCTGTCTGTTAGt > 1:182681‑M1/157‑206 (MQ=255) atcttttcctgtgtgggacgccgtctgcgtttctccggccctaagacatcagtcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagggatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAAGTCGCGATTGCGGATTCTGGTCTGGCTGATAGTGAGCTGGTATCGGTGGCCTGGGc > 1:182054‑M1/148‑220 (MQ=255) cTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTAGCTACATCGGGCCGGAAGAGCCGACAGCAGATCTGATCTGGCACGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcc > 1:126387‑M1/1‑142 (MQ=255) ncgTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgctaacccagcgcactatgcggattccattcgt > 1:56749‑M1/2‑136 (MQ=255) acaGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc > 1:11841‑M1/1‑113 (MQ=255) catctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTgcg < 1:119851‑M1/125‑1 (MQ=255) cGCTACAGCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcactgaacccattacaagcccgctgccgcagatattcccgtggcgagcgagaacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacc < 1:92552‑M1/250‑161 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATACGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAAcgcc > 1:219022‑M1/85‑251 (MQ=255) actagtctaaaaactagtattaagactatcacgtatgtaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGtctgtctg > 1:208305‑M1/79‑123 (MQ=255) ccGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttggg < 1:80873‑M1/251‑174 (MQ=255) aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTGAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCGACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGct > 1:177088‑M1/70‑251 (MQ=255) actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACAGTATCGATCGGAAATTCGCGAGTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGGGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAgc > 1:34142‑M1/67‑213 (MQ=255) gatctgatctGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatcggttatcacttaacccattacaagcccgctgccgcagctattcccgtagcgagcgctaacccagcgcactatgcggatgccattcgttatactgctcgaacgcctctgcaagcttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtc > 1:12243‑M1/1‑60 (MQ=255) gatctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtc < 1:6519‑M1/246‑192 (MQ=255) gatctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCAGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgtta > 1:101393‑M1/1‑55 (MQ=255) gATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcn < 1:24582‑M1/160‑133 (MQ=255) ggagattcagggtgccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGGCAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTc > 1:117565‑M1/23‑214 (MQ=255) | TGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGA > NC_000913/4134952‑4135375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |