New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1651548	NA (NA)	12 (1.180)	9/298	0.1	92.3%	noncoding (706/706 nt)	IS2	repeat region
	?	NC_000913	= 1792776	1 (0.100)					intergenic (‑45/+33)	nlpC/btuD	NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

CATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAAC  >  NC_000913/1792593‑1792947                                                                                                                                                                                        |                                                                                                                                                                            catgccaGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacagctgttatcacttaacccattacaagc                                                                                                                        >  1:202810‑M2/1‑184 (MQ=255)                                                                            gTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggt                               >  1:74117‑M2/1‑109 (MQ=255)                                                                               cTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACTCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttcc                                                                                                                                                        >  1:209581‑M2/1‑106 (MQ=255)                                                                                        ggCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTGCCTCTGGGTTTTAGTCTTGCATGAATTTAGCGTCtggatttgcccctatatttccagacatctggtatcacttatcccagtacaagctcgctgcggcagatattcccgtggcgagctataacccagcgcactctgtgtatgccatgcgttataatgctcgaacgcctctgcaatgttcttcgctgac                    >  1:46131‑M2/1‑97 (MQ=255)                                                                                          cTACACCCGGCCAGAAGCAGTGCGGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGCTCCTCTGTTTGTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacgtaacccattactagcccgctgccgcagatattcccgtggcgagcgataacc                                                                                    >  1:148278‑M2/1‑95 (MQ=255)                                                                                               nccgGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTGGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaaccc            <  1:152456‑M2/250‑162 (MQ=255)                                                                                                                               ggCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                                                    >  1:13073‑M2/1‑58 (MQ=255)                                                                                                                                   gAAACNNATNNNGTNNGCTTCCTCTGTTTTTTATTCTTGNATTAATTTAGCGTCtcgatttccccctctntntncaganntctnttatcacttancccattacaagcccgctgccgcagatattctcgtggcgcgc                                                                                           <  2:191827‑M2/136‑83 (MQ=255)                                                                                                                                   gAAACGCAGTCCGTACGGTTCCTCTTGTGTGTATTCGTGCATTAATTTAGCGTCtggatttgcccttatatttccatacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                                                                                           >  1:191827‑M2/1‑54 (MQ=255)                                                                                                                                          aTTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattccaagcccgctgccgcaaatattcccgtggcgagcaataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc                                         >  1:133566‑M2/1‑47 (MQ=255)                                                                                                                                              cGTACGGATCCTCTGTTTTTTATTCTTGCATTACTTTAGCGTCtggatttgcccctatatttaccaacatctgttatcacttaacccattacaagcccgctgccgccgatattcccgtggcgatcggtaacccagcgcaccatgcg                                                                      <  1:2900‑M2/146‑104 (MQ=255)                                                                                                                                                               ttttATTCTTGCATTAATTGAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                                                     >  1:19125‑M2/1‑26 (MQ=255)                                                                                                                                                                                  tAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCAAGAAGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGAACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAAc  >  1:105994/1‑178 (MQ=255)                                                                                                                                                                                        |                                                                                                                                                                            CATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAAC  >  NC_000913/1792593‑1792947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.