| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,682,261 | Δ34 bp | coding (1154‑1187/1287 nt) | dctA ← | C4 dicarboxylate/orotate:H(+) symporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3682261 | 3682294 | 34 | 29 [0] | [0] 29 | dctA | C4 dicarboxylate/orotate:H(+) symporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3682260 | 0 (0.000) | 29 (1.350) | 26/486 | 0.1 | 100% | coding (1188/1287 nt) | dctA | C4 dicarboxylate/orotate:H(+) symporter |
| ? | NC_000913 | 3682295 = | 0 (0.000) | coding (1153/1287 nt) | dctA | C4 dicarboxylate/orotate:H(+) symporter | |||||
AGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAATGGTCGCTACGCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGATG > NC_000913/3682053‑3682534 | gtgttagaccgcaagaacatgaaaatgacacggaagaagtgaaataaacctgaaatcacccaggtggtaagttcaggcacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACg > 2:169398‑M2/243‑249 (MQ=255) tagaccgcaagaacatgaaaatgtcacggaagaagtgaaataaacctgaactcacccaggtggtaagttcaggcacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTc > 1:81790‑M2/239‑251 (MQ=255) catgaaaatgtcacggaagaagtgaaataaacctgaactcacccaggtggtaagttcaggcacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCgg < 2:62835‑M2/26‑1 (MQ=255) catgaaaatgtcacggaagaagtgaaataaacctgaactcacccaggcggtaagttcaggcacaggggtcaattatgcgcaaacacccgcactcggggaagggcgtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtcacgttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCgg > 2:120873‑M2/226‑251 (MQ=255) cacggaagaagtgaaataaacctgaactcacccaggtggtaagttcaggcacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCg > 1:66544‑M2/215‑249 (MQ=255) ctgaactcacccaggtggtaagtgcaggcacaggggtcaattatgcgcacacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtgctccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAACGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTAc > 2:90980‑M2/194‑251 (MQ=255) ccaggtggtaagttcaggcacaggggtcaattatgcgcaaacacccgaactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAANTgg > 2:201717‑M2/184‑251 (MQ=255) aagttcaggcacaggggtcaattatgctcaaacccccgcactcggggaagggagtgcgggcataagtgatgagatttagtggatacttcgtgcgttttgccatccgtcgcacgattattcagcacatcgtccattttgttgtggtccagtgctttcactcacttagcaacgacaGCGCACGAGCTTCTGTCGTAAAGCGTTCGGTACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCTACCGCa < 1:26595‑M2/77‑1 (MQ=255) caggcacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggctcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCagagag < 1:168622‑M2/82‑1 (MQ=255) cacaggggtcaattatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTc > 1:151156‑M2/166‑251 (MQ=255) gtcaattatgcgcaaacgcccgcactcggggaagggagtgcgtgcataagtgatgagattaagaggattattcgttcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGATCGTcgccgccc < 2:160428‑M2/93‑2 (MQ=255) tcacttatgcgcaaacacccgcactcggggaagggagtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgtacgattattcagcacatcgtccagttttttgtggtccagttctttaacccacttagcaccgacaGCGCACGAGCTTCTGACATAAAGCGGCCGATACCGAGGATCAGCGCCAGACCCGCTACCGTCAAATGGCCCACCGCAGAGAGCGTCgccgcc > 2:65750‑M2/158‑249 (MQ=255) actcggggaagggcgtgcgggcataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtcgagttttttgtggtacagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACAGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCTCTACCCGtt > 2:96204‑M2/136‑251 (MQ=255) ataagtgatgagattaagaggataattcgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTaga > 1:103701‑M2/114‑249 (MQ=255) aattcgttcttttggccatccggcgcacgagtattcagcacatcgtccagttttttttggtccagttctttcacccccttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAg < 2:177468‑M2/160‑1 (MQ=255) cgtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTg > 1:49904‑M2/87‑250 (MQ=255) gtgcgttttgccatccggcgcacgattattcagcacatcgtccagttttttgtgatccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTCCCGTCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGAt < 2:39982‑M2/166‑1 (MQ=255) gccatccggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGAACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGAc < 1:36283‑M2/175‑1 (MQ=255) cggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATc > 2:7309‑M2/71‑251 (MQ=255) ggcgcacgattattcagcacatcgtccagttttttgtggtccagttctttcacccacgtagcaacgccaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATcc < 1:90980‑M2/182‑1 (MQ=255) gcgcacgattattcagcccatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGTCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCa < 1:120873‑M2/183‑1 (MQ=255) attcagcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTACCAACGTGCTTTGCGGGACGATatccatcttcctgtt > 2:46809‑M2/59‑244 (MQ=255) attcagcacatcgtccagttttttgtggcccagttctttcacccaattaacaacgacaGCGTACGATCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGCGCGTCGCCGCCAGCACAATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGACGAAAGCAGCAACACACTTATCAGCGTTATTTGGTGGCcgatatccatatagatgtt > 1:27130‑M2/59‑242 (MQ=255) agcacatcgtccagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTg < 1:201609‑M2/197‑1 (MQ=255) cagttttttgtggtccagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGATCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCACCACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGAt < 1:427‑M2/208‑1 (MQ=255) cagttctttcacccacttagcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGCTTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGTCCTGGTCGATAAACACCGCCGCCAt > 2:42587‑M2/29‑251 (MQ=255) cccttagcaacgacgGCCCACGAGCTTCTGACATAAAGCGGTCGATCCCGAGGATCAGCGCGAGACCCGCTTCCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCATCACGATAAAGCCTCTACCCGTTCCCCCTGCCGCCCCTTTAAAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATGTCCATCGGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATc < 1:96204‑M2/236‑1 (MQ=255) ataagaaacgacaGCTCACGAGCTTCTGACAGAAAGCGGTCGATACCGGGGATCAGCGCCAACCCCGCTCCCGCCAAATGCCCCACCGCAGAGGGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTGAGAAGAAAGCAGCAACACGATTAACAGCGTGATTGGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGa < 2:103701‑M2/238‑1 (MQ=255) agcaacgacaGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGAtg < 1:193966‑M2/240‑1 (MQ=255) | AGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAATGGTCGCTACGCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGATG > NC_000913/3682053‑3682534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |