Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,590,854	Δ7,233 bp		[hipA]–hipB	[hipA], hipB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1590854	1598086	7233	43 [0]	[0] 43	[hipA]–hipB	[hipA],hipB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1590853	0 (0.000)	43 (0.660)	42/478	0.2	100%	intergenic (‑852/+1)	ydeT/hipA	fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA
	?	NC_000913	1598087 =	0 (0.000)					intergenic (‑5645/+530)	hipB/lsrK	antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase

CAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGTATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCATGCATCTGCACTTCCGGGAATCTCAGCACCTTTGCTGTCGCCAAAAAATGTCGCGGATAAATTTTATCGATTGCCGTTTTTTTGCCTTT  >  NC_000913/1590605‑1591099                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                       cagacaCTGCGCTCTTGGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCat                                                                                                                                                                                                                                                      <  2:450244‑M1/251‑3 (MQ=255)                      ggggCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaaca                                                                                                                                                                                                                                  <  2:55786‑M1/250‑23 (MQ=255)                                                 ccATGCCCAGGCCACTTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccccgaaagcgaagagtcgtc                                                                                                                                                                                                       >  2:437217‑M1/1‑201 (MQ=255)                                                 ccATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtca                                                                                                                                                                                                      <  1:89281‑M1/251‑51 (MQ=255)                                                 ccATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcg                                                                                                                                                                                                         <  2:83154‑M1/248‑48 (MQ=255)                                                 ccATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATAataaacgctccatatacaaacaatacagccacgaaagagatgagtcg                                                                                                                                                                                                         <  2:328811‑M1/248‑48 (MQ=255)                                                                  aTGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaa                                                                                                                                                                                      <  1:274221‑M1/250‑67 (MQ=255)                                                                              aggCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgccccatctacaaacaatacagccacgacagagttgagtcgtcagacattaaaaatgaaacttattaaattgt                                                                                                                                                                         >  2:126534‑M1/1‑172 (MQ=255)                                                                               ggCTTAAGTTCTTGAACCTTTAACGAATACTGACTACCAGAAAAGCACTTCGCATAACACAGACATGATTTAACATAATATACATTATGCTCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGGCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctcaatatacaaacaatacagccacgaaagagatgagtcgtaagacattaaaaatgaaacttattaaaatgtc                                                                                                                                                                        <  2:328895‑M1/251‑81 (MQ=255)                                                                                        tCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctg                                                                                                                                                               >  2:208635‑M1/1‑162 (MQ=255)                                                                                            gAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtat                                                                                                                                                            <  1:149048‑M1/250‑93 (MQ=255)                                                                                             aaCCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattg                                                                                                                                                          >  1:244696‑M1/1‑157 (MQ=255)                                                                                                       gAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACAAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagtt                                                                                                                                                <  1:126534‑M1/251‑105 (MQ=255)                                                                                                         aTAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaanttgtcagaggtctgtattgagtgttagttgg                                                                                                                                              >  2:254124‑M1/1‑145 (MQ=255)                                                                                                         aTAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttgg                                                                                                                                              <  1:240028‑M1/251‑107 (MQ=255)                                                                                                               aCTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgg                                                                                                                                        <  1:13463‑M1/251‑113 (MQ=255)                                                                                                                   ccAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacatt                                                                                                                                                                                                >  1:243614‑M1/1‑135 (MQ=255)                                                                                                                   ccAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacatt                                                                                                                                                                                                <  2:243614‑M1/191‑57 (MQ=255)                                                                                                                     aGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggt                                                                                                                                  >  1:220204‑M1/1‑133 (MQ=255)                                                                                                                       aaaaGCACTTCGCATCACTCAGACATGATTTNACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgt                                                                                                                                <  2:244696‑M1/251‑121 (MQ=255)                                                                                                                          aGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtca                                                                                                                              >  1:322616‑M1/1‑128 (MQ=255)                                                                                                                            cACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatt                                                                                                                           <  2:332545‑M1/251‑126 (MQ=255)                                                                                                                               ttCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttgg                                                                                                                        >  2:181203‑M1/1‑123 (MQ=255)                                                                                                                                    aTCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtccgaggactgtattgagtgttagttggaggtgggaaggtgtcaatttggctaat                                                                                                                   >  2:311412‑M1/1‑118 (MQ=255)                                                                                                                                          cAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCCGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgct                                                                                                              <  2:418193‑M1/250‑139 (MQ=255)                                                                                                                                                      aaCATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGTTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcttcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaa                                                                                                  <  1:255528‑M1/250‑151 (MQ=255)                                                                                                                                                           aataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgat                                                                                             <  1:239512‑M1/250‑156 (MQ=255)                                                                                                                                                                  aTTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaggggatgagtcgtaagacattaaaaatgaaccttattaatttgcaagaggtctgtattggttgttagtggggggggggaaggggtcattttggctaatttgctaatgctttggaattgatagattaa                                                                                      >  1:338031‑M1/1‑88 (MQ=255)                                                                                                                                                                             cAATATAAACCAAGGAAGAATTCATGCGTTGGCGGTCATGAGTGTCATGCTCATTAACAATGACCAAACCCCATAACataaacgctccatataaaaacaatacagccacgaaagagatgagtcgtcagacagtaaaaatgaaacgtattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagt                                                                          <  2:101926‑M1/251‑175 (MQ=255)                                                                                                                                                                               atatAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttc                                                                        >  1:195356‑M1/1‑75 (MQ=255)                                                                                                                                                                                   aaaCCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttat                                                                    <  1:284189‑M1/251‑181 (MQ=255)                                                                                                                                                                                      ccAAGGAAGAATCCAGGCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttatttt                                                                 <  1:192881‑M1/251‑184 (MQ=255)                                                                                                                                                                                       cAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttt                                                                >  2:200285‑M1/1‑67 (MQ=255)                                                                                                                                                                                        aaGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttat                                                               <  1:437217‑M1/251‑186 (MQ=255)                                                                                                                                                                                          ggAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttattt                                                             >  1:156916‑M1/1‑64 (MQ=255)                                                                                                                                                                                                            gCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagtt                                           <  1:185834‑M1/251‑206 (MQ=255)                                                                                                                                                                                                                               tCATTAACAATGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagttattgttgcttaataagaa                         >  1:321409‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                                        aTGACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttctaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagttattgttgcttaataagaaaactgtttct               <  1:457290‑M1/251‑234 (MQ=255)                                                                                                                                                                                                                                          gACCAAACCCCATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagttattgttgcttaataagaaaactgtttcttt             <  1:416419‑M1/251‑236 (MQ=255)                                                                                                                                                                                                                                                  cccATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagttattgttgcttaataagaaaactgtttctttcaatagga     <  1:491901‑M1/251‑244 (MQ=255)                                                                                                                                                                                                                                                  cccATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaata                                                        >  2:126756‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                  cccATATCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattgtcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaatttgctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaata                                                        <  1:126756‑M1/200‑193 (MQ=255)                                                                                                                                                                                                                                                     atatCataaacgctccatatacaaacaatacagccacgaaagagatgagtcgtcagacattaaaaatgaaacttattaaattggcagaggtctgtattgagtgttagttggaggtgggaaggtgtcaatttggctaattggctaatgctttcgaattgatagattaaaaattgcatagttcttattttatttaaatatgaactatgagttattgttgcttaataagaaaactgtttctttcaataggaaaa  <  2:195356‑M1/251‑247 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                       CAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAACGACTACCAGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGTATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCATGCATCTGCACTTCCGGGAATCTCAGCACCTTTGCTGTCGCCAAAAAATGTCGCGGATAAATTTTATCGATTGCCGTTTTTTTGCCTTT  >  NC_000913/1590605‑1591099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑