| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,498,768 | 9486 bp→CCC | [pyrS]–fryB | [pyrS], pyrR, ypdC, fryA, ypdE, ypdF, fryC, fryB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2498768 | 2508253 | 9486 | 29 [0] | [0] 28 | [pyrS]–fryB | [pyrS],pyrR,ypdC,fryA,ypdE,ypdF,fryC,fryB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2498767 | 0 (0.000) | 28 (0.460) +CCC |
26/488 | 0.7 | 100% | coding (97/1698 nt) | pyrS | sensor histidine kinase PyrS |
| ? | NC_000913 | 2508254 = | 0 (0.000) | intergenic (‑12/+207) | fryB/glk | putative PTS enzyme IIB component FryB/glucokinase | |||||
AACCAGAAGTGCATTATCAAGAGATGCATTGCTAATACACCATTTATCTATCAATCCCCTTTTAAAATTGTGGTTTTTCCTCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGAACTGTTGCACAAGTCGGCGCACTCCCCAAAAGAATTGCTCGCCGTTACCGCCATTTTCTCGCTGTTCGCCCTGTTCAGCACCTGGTCCGGCGTTCCCGTAGAAGGCTCGCTGGTGAACGTACGTATTATCGCGGTGATGTCCGGCGGGATTCTGTTTGGCCCGTGGGTAGGCATCATTACCGGCGTGATTGCGGGTATTCACCGGTATTTAATTGATATCGGCGGCGTGACGGCGATCCCCTGCT > NC_000913/2498518‑2499013 | aaCCAGAAGTGCATTATCAAGAGATGCATTGCTAATACACCATTTATCTATCAATCCCCTTTTAAAATTGTGGTTTTTCCTCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCCTCCGTATCCGCCTGTTTCGCGc > 2:152641‑M1/1‑250 (MQ=255) cacCATTTATCTATCAATCCCCTTTTAAGATTGTGGTTTTTCCGCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATGCAGAGTCGCCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCAGCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacg < 1:131651‑M1/251‑39 (MQ=255) aTTTATCTATCAATCCCCTTTTAAAATTGTGGTTTTTCCTCACAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCCTCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattttgaacgtgc > 2:110082‑M1/1‑209 (MQ=255) ggTTTTTCCTCAAAAACGTCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTTTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatg < 2:301021‑M1/251‑73 (MQ=255) tttttCCTCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaacagacaaataatgc > 1:47089‑M1/1‑177 (MQ=255) tCCTCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcattt > 1:41288‑M1/1‑173 (MQ=255) aaaaaCGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggg > 1:415304‑M1/1‑168 (MQ=255) aCGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaat < 2:280448‑M1/251‑88 (MQ=255) ggTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgac > 1:16554‑M1/1‑139 (MQ=255) agGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGTCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgt < 1:496426‑M1/251‑128 (MQ=255) aaTCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggg < 1:110082‑M1/250‑133 (MQ=255) ttATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtggcgcaagtcgaccttgtgaggggcaac > 1:263836‑M1/1‑113 (MQ=255) tATTCAGAGTCACCCGTGCACGAAATATTCCACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtga > 1:359942‑M1/1‑112 (MQ=255) tATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacac < 1:161861‑M1/249‑138 (MQ=255) tATTCAGAGGCACCCGTGCACGAAAGATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTTAGG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCGGTTTCGCGccccgttcagtga < 2:359942‑M1/125‑14 (MQ=255) ccggagcctcccgtgcagtaaaacttcaacaggctgctgtcggtcttcgaTCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGGCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgatcgtgcaaaacaaatcgccgttaccatacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgtcgcaggtcgcccttgtgagtggacacaaaga < 2:349834‑M1/227‑143 (MQ=255) cAGAGTCACCCGTGCACGAAATATTCAACAGGCTGCTGGCGGTCTTCTATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTCCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaa < 2:331826‑M1/251‑144 (MQ=255) cACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaact > 2:365540‑M1/1‑94 (MQ=255) cAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgattta < 1:152641‑M1/250‑168 (MQ=255) aCATGCTGCTGGCGGTCTTCGATCGGACAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaa < 1:92524‑M1/251‑171 (MQ=255) cATGCTGCTGGCGGGCTCAGATCGGGCAGCGAT‑ATGTCTTATCGTCCTGTCCTTTCTCAGCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgcagtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaaa < 2:18872‑M1/251‑172 (MQ=255) tgGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCAGGCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGcaccgttcagtgatagttgacgagtgaaattatgaacgtgcaacacaaatcgccgttaccagacaaataatgcatttactggagaattaatccagctgtacggaagtgtgaagcaggtcgaccttgtgaggggccacaaagaaaaattgaataaaatgtatgatttaaaagattatcgg > 2:451586‑M1/1‑72 (MQ=255) gATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaacaattgaataaactgtatgatttaaaagattatcgggagagttacct > 2:208572‑M1/1‑61 (MQ=255) gTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaagattatcgggagagttacctcccgatataaa < 1:292885‑M1/251‑202 (MQ=255) aTG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgcgtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaagattatcgggagcgttacctcccgatataaaagg > 2:297194‑M1/1‑46 (MQ=255) aTCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaacagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaagattatcgggagagttacctcccgatataaaaggaaggatt > 1:122649‑M1/1‑40 (MQ=255) gCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactggatgatttaaaagattatcgggagagttacctcccgatataaaaggaaggatttac > 1:187484‑M1/1‑36 (MQ=255) ccGTATCCGCCTGTTTCGCGccccgttcagtgatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaagattatcgggagagttacctcccgatataaaaggaaggatttacagaatgtgacctaaggt > 1:402601‑M1/1‑20 (MQ=255) cgcgccccggtcagggatagttgacgagtgaaattatgaacgtgcaaaacaaatcgccgttaccagacaaataatgcatttactggagaattaatcccgctgtacggaagtgtgacgcaggtcgaccttgtgaggggacacaaagaaaaattgaataaactgtatgatttaaaagattatcgggagagttacctcccgatataaaaggaaggatttacagaatgtgacctaaggtctggcgtaaatgtgc < 2:16554‑M1/250‑247 (MQ=255) | AACCAGAAGTGCATTATCAAGAGATGCATTGCTAATACACCATTTATCTATCAATCCCCTTTTAAAATTGTGGTTTTTCCTCAAAAACGGCCTGCTGGTCATCAGCCTTCAGGTTACCTATCATAGAGGTTTAATCCTTATTCAGAGTCACCCGTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATG‑CTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGAACTGTTGCACAAGTCGGCGCACTCCCCAAAAGAATTGCTCGCCGTTACCGCCATTTTCTCGCTGTTCGCCCTGTTCAGCACCTGGTCCGGCGTTCCCGTAGAAGGCTCGCTGGTGAACGTACGTATTATCGCGGTGATGTCCGGCGGGATTCTGTTTGGCCCGTGGGTAGGCATCATTACCGGCGTGATTGCGGGTATTCACCGGTATTTAATTGATATCGGCGGCGTGACGGCGATCCCCTGCT > NC_000913/2498518‑2499013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |