mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,208,132 | 0 | G | A | 75.0% | 16.8 / 10.1 | 20 | intergenic (‑600/‑15) | purH/rrsE | bifunctional AICAR transformylase/IMP cyclohydrolase/16S ribosomal RNA |
| * | NC_000913 | 450,156 | 0 | C | . | 64.7% | 10.4 / 24.5 | 17 | coding (486/1992 nt) | cyoB | cytochrome bo3 subunit 1 |
| * | NC_000913 | 4,209,791 | 0 | G | A | 34.0% | 39.2 / 49.3 | 54 | noncoding (18/76 nt) | gltV | tRNA‑Glu |
| * | NC_000913 | 1,838,007 | 0 | A | C | 28.0% | 23.3 / 14.5 | 25 | T266P (ACT→CCT) | ynjC | putative ABC transporter membrane subunit YnjC |
| * | NC_000913 | 366,526 | 0 | T | G | 25.1% | 1446.3 / 106.1 | 697 | T329P (ACC→CCC) | lacI | DNA‑binding transcriptional repressor LacI |
| * | NC_000913 | 4,296,060 | 0 | C | T | 25.0% | 38.0 / 10.4 | 24 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| * | NC_000913 | 1,370,044 | 1 | . | T | 21.4% | 27.2 / 10.9 | 14 | intergenic (+41/‑172) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |