Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	402,391	Δ723 bp	coding (645‑1367/1416 nt)	phoA →	alkaline phosphatase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	402391	403113	723	34 [0]	[1] 35	phoA	alkaline phosphatase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 402390	0 (0.000)	34 (0.690)	31/474	0.5	100%	coding (644/1416 nt)	phoA	alkaline phosphatase
	?	NC_000913	403114 =	0 (0.000)					coding (1368/1416 nt)	phoA	alkaline phosphatase

AACCGGTGTCAAAACCTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/402142‑402390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCC  >  NC_000913/403114‑403346                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCGGTGTCAAAACCTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACC                                                                                                                                                                                                                                         <  1:307945/251‑1             AACCTATAACGGCGCGGTGGGCGTCGATAGTCAAGAAAAAGATCCCCCCACGATTCTGGAAATTGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGGTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGGCCGGTTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTTCCGACCAGACCGATCTCT                                                                                                                                                                                                                             <  2:439922/251‑1                CTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCT                                                                                                                                                                                                                          >  2:227155/1‑251                             CTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGC                                                                                                                                                                                                             >  1:48269/1‑251                                  CGTCTATATGCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGGTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGTCCGATCTCTTCTACACCACGAAAGCCGCTC                                                                                                                                                                                                        <  2:360862/251‑1                                     CGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTG                                                                                                                                                                                                      <  1:35061/250‑1                                                 AAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAA                                                                                                                                                                                         <  1:227155/251‑1                                                  AAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAA                                                                                                                                                                                        <  1:270292/251‑1                                                    AGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACC                                                                                                                                                                                      <  1:40332/251‑1                                                                    CTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAACCGCTCTGGGGCTGAAATAAcacagagcccagacgtgaat                                                                                                                                                                      >  2:167729/1‑231                                                                    CTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAA                                                                                                                                                                                                                >  2:73145/1‑209                                                                    CTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAA                                                                                                                                                                                                                <  1:73145/209‑1                                                                               AAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCTACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCG                                                                                                                                                                                     <  1:254712/225‑1                                                                               AAAAGCCGCAGGACTGGCGACCGGAAACGTTTCTACCGCAGCGTTGCAGGATGCCACCCCCGATGCGCTGGGG‑GCACATGCGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATTTCCGGGTAACGCTCTGGAAAAAGGCGGCAAAGGATCGATTACCGACCAGGCCGGTCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGagatcggacgaccctcgtgtcgggt                                                                                                                                                            >  2:254712/1‑225                                                                                AAAGGCGCATGTCTGGCGACCGGGATCGTTTCTACCGCAGAGGTGCAGGTTGCCACGGCCGCTGTGCTGGTG‑GCACTTGTGACCTCGCGCAAATGATACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATGGATTACCGACCAGTCCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCtgg                                                                                                                                                          <  2:261032/251‑4                                                                                                         ACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGCTCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTAGCTGTTAGCAACC                                                                                                                                  >  2:562541/1‑250                                                                                                                      AGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGCAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGCTCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCC                                                                                                                                                                                >  1:41081/1‑191                                                                                                                      AGAGTTGCAGGATGACACGCCCGCTGCGCTG‑TGTGCACATGTGACCTCGCGCAAAGGCTACGGTCCGCGCGCGACCAGTGAAAAATGCCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGACCTCTGCTACGCCATGAAAGCCGCTCTGGGGCTGAAATAAACCCTCGCCC                                                                                                                                                                                <  2:41081/191‑1                                                                                                                           TGCAGGATGCCACGCCCGCTGCGAAGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGTTCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATACAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATAGCAGATCAC                                                                                                               >  2:224126/1‑251                                                                                                                                            gccgatCTGGGG‑GCACATGTGCCCTCTCGCTAAGGCTACGGTCCGAGCGGGACCTGTGAAAAATGTCCGGGGAACGCTCTGGAAAAAGGCTGAAAAGGATCGATTACCGACCAGACCGAGCTCGTCTACTCCATGAACGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTGTTGCTGTTAGCATCCAGACTTAATGGCAGATCACGGGCTCATACGTTCATG                                                                                              <  2:564452/245‑1                                                                                                                                                CGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTA                                                                                          <  1:562541/251‑1                                                                                                                                                             ATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAG                                                                              <  1:305031/251‑1                                                                                                                                                                     ccgaGCAACTGCTACGGGCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCTACCAGGCCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAATCCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTGAATGGCAGATCACGGTCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTG                                                                      <  2:96286/247‑1                                                                                                                                                                       GCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATTCGCTCATGGTTAAAACATGAAAAGGGATGGTGCT                                                                    >  2:254636/1‑251                                                                                                                                                                                                        aaaaggttCGGGTTACGCTCTGGAAAAAGGTGGAAATGGATCCATTACCGACCAGACCGATCTCTTCTACACTCTGAAAGTCGCTCTGGGGCTGGAATAAAACCGCGCCTGGCAGTGATTTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTGAATGGGAGATCACTGGCGCATACGCTTATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTTCTGGTTACCTTGCTTTTC                                   <  2:62045/243‑1                                                                                                                                                                                                         AAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCG                                  >  1:509037/1‑251                                                                                                                                                                                                               CCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGG                            >  1:224982/1‑251                                                                                                                                                                                                                  GGTAACGCTCTGGAAGAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTGCTACACCATGAAAGCCGCTCTGGGGTTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAATCATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTT                                     <  2:396422/239‑1                                                                                                                                                                                                                  GGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTT                                     >  1:396422/1‑239                                                                                                                                                                                                                  GGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTGTCGGTCTGGTTT                         <  1:138529/251‑1                                                                                                                                                                                                                               AAAACGGCGGAAACGGATCGATTAACGAACAGACCGATATCTTCTACACCATGAAAGCCGCTCTGGGGCTGAACTAACACCGCGCCCGGCAGTGAATTTTCGCTGACGGGTGGTTATTTTGCTGTTAGAGACCAGGCTTAATGGCAGATAACGGGCGCATAAGCTCATGGTTAAAACCTGAAGTGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTACCCACCtt            >  2:36495/1‑249                                                                                                                                                                                                                                AAAAGGCGGAAAAGGAGCGATTACCGCCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAACCCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTC           <  2:479777/251‑1                                                                                                                                                                                                                                       GGAAAAGGAGCGCTTACCGACCAGAACGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGAAGTGAAGTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGTCTTAATGGAAGATCACGGGCGCATAAGCCCATGGTTAAAACATGAAGAGGGATGGAAATTTGAAAATAACATTCCTGGTTACCTTGCTTTTCGGTCTGTTTTTTTTAACCACCGTCGacggtg    >  2:556202/1‑245                                                                                                                                                                                                                                         AAAAGGATCGATTACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCC  >  1:244312/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCGGTGTCAAAACCTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTG‑GCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/402142‑402390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCC  >  NC_000913/403114‑403346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.